RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 SMR3BP02814 79 aaPredicted RBP6.07□□□□□ -1.44
TM9SF2-201ENST00000376387 DYNC1H1Q14204 4646 aaKnown RBP6.05□□□□□ -1.44
TM9SF2-201ENST00000376387 C10orf95Q9H7T3 257 aa6.05□□□□□ -1.44
TM9SF2-201ENST00000376387 APOBP04114 4563 aaKnown RBP6.04□□□□□ -1.44
TM9SF2-201ENST00000376387 RPS29P62273 56 aaKnown RBP6.03□□□□□ -1.44
TM9SF2-201ENST00000376387 KRTAP13-4Q3LI77 160 aa5.99□□□□□ -1.45
TM9SF2-201ENST00000376387 HSPG2P98160 4391 aa5.97□□□□□ -1.45
TM9SF2-201ENST00000376387 A0A0D9SG42 100 aa5.96□□□□□ -1.45
TM9SF2-201ENST00000376387 RYR2Q92736 4967 aa5.96□□□□□ -1.45
TM9SF2-201ENST00000376387 KRTAP10-6P60371 365 aaPredicted RBP5.96□□□□□ -1.46
TM9SF2-201ENST00000376387 CAMK2N1Q7Z7J9 78 aa5.96□□□□□ -1.46
TM9SF2-201ENST00000376387 TPRXLQ17RH7 258 aa5.96□□□□□ -1.46
TM9SF2-201ENST00000376387 A0A1B0GVY2 172 aa5.95□□□□□ -1.46
TM9SF2-201ENST00000376387 KRTAP3-3Q9BYR6 98 aa5.94□□□□□ -1.46
TM9SF2-201ENST00000376387 FAT3Q8TDW7 4589 aa5.93□□□□□ -1.46
TM9SF2-201ENST00000376387 KRTAP10-4P60372 401 aaPredicted RBP5.91□□□□□ -1.46
TM9SF2-201ENST00000376387 LRP1Q07954 4544 aaKnown RBP5.9□□□□□ -1.46
TM9SF2-201ENST00000376387 RPL37P61927 97 aaKnown RBP5.9□□□□□ -1.46
TM9SF2-201ENST00000376387 KRTAP3-2Q9BYR7 98 aa5.9□□□□□ -1.46
TM9SF2-201ENST00000376387 MYCBP2O75592 4640 aa5.88□□□□□ -1.47
TM9SF2-201ENST00000376387 KMT2CQ8NEZ4 4911 aaKnown RBP5.87□□□□□ -1.47
TM9SF2-201ENST00000376387 KRTAP10-8P60410 259 aa5.87□□□□□ -1.47
TM9SF2-201ENST00000376387 TNXBP22105 4242 aa5.85□□□□□ -1.47
TM9SF2-201ENST00000376387 KRTAP12-2P59991 146 aa5.8□□□□□ -1.48
TM9SF2-201ENST00000376387 LPAP08519 4548 aa5.79□□□□□ -1.48
TM9SF2-201ENST00000376387 S4R3F8 94 aa5.78□□□□□ -1.48
TM9SF2-201ENST00000376387 RYR3Q15413 4870 aa5.75□□□□□ -1.49
TM9SF2-201ENST00000376387 R4GN34 69 aa5.74□□□□□ -1.49
TM9SF2-201ENST00000376387 XP32Q5T750 250 aa5.71□□□□□ -1.49
TM9SF2-201ENST00000376387 KRTAP12-1P59990 96 aa5.7□□□□□ -1.5
TM9SF2-201ENST00000376387 RYR1P21817 5038 aa5.65□□□□□ -1.51
TM9SF2-201ENST00000376387 LRP2P98164 4655 aa5.63□□□□□ -1.51
TM9SF2-201ENST00000376387 Q5VSD8 79 aa5.62□□□□□ -1.51
TM9SF2-201ENST00000376387 KRTAP23-1A1A580 65 aa5.61□□□□□ -1.51
TM9SF2-201ENST00000376387 KRTAP17-1Q9BYP8 105 aa5.56□□□□□ -1.52
TM9SF2-201ENST00000376387 PRO2289Q9P1D8 64 aa5.53□□□□□ -1.52
TM9SF2-201ENST00000376387 KIAA1109Q2LD37 5005 aa5.53□□□□□ -1.52
TM9SF2-201ENST00000376387 EPPK1P58107 5090 aaKnown RBP5.52□□□□□ -1.53
TM9SF2-201ENST00000376387 M0QZ58 72 aa5.5□□□□□ -1.53
TM9SF2-201ENST00000376387 PLAC4Q8WY50 150 aa5.49□□□□□ -1.53
TM9SF2-201ENST00000376387 MT1HL1P0DM35 61 aa5.45□□□□□ -1.54
TM9SF2-201ENST00000376387 ABCA13Q86UQ4 5058 aa5.44□□□□□ -1.54
TM9SF2-201ENST00000376387 LORP23490 312 aaPredicted RBP5.41□□□□□ -1.54
TM9SF2-201ENST00000376387 KRTAP4-5Q9BYR2 181 aa5.36□□□□□ -1.55
TM9SF2-201ENST00000376387 MUC17Q685J3 4493 aa5.34□□□□□ -1.55
TM9SF2-201ENST00000376387 BIRC6Q9NR09 4857 aa5.34□□□□□ -1.56
TM9SF2-201ENST00000376387 HERC2O95714 4834 aa5.3□□□□□ -1.56
TM9SF2-201ENST00000376387 KRTAP4-1Q9BYQ7 146 aa5.22□□□□□ -1.57
TM9SF2-201ENST00000376387 MUC2Q02817 5179 aa5.17□□□□□ -1.58
TM9SF2-201ENST00000376387 KRTAP19-2Q3LHN2 52 aa5.11□□□□□ -1.59
TM9SF2-201ENST00000376387 PP632Q6XCG6 107 aa5.09□□□□□ -1.6
TM9SF2-201ENST00000376387 PCLOQ9Y6V0 5065 aa5.03□□□□□ -1.6
TM9SF2-201ENST00000376387 FLGP20930 4061 aaPredicted RBP5.02□□□□□ -1.61
TM9SF2-201ENST00000376387 INE1O15225 51 aa5.01□□□□□ -1.61
TM9SF2-201ENST00000376387 TNP1P09430 55 aa4.94□□□□□ -1.62
TM9SF2-201ENST00000376387 LCE2CQ5TA81 110 aa4.94□□□□□ -1.62
TM9SF2-201ENST00000376387 HMCN2Q8NDA2 5059 aa4.94□□□□□ -1.62
TM9SF2-201ENST00000376387 HERC1Q15751 4861 aa4.92□□□□□ -1.62
TM9SF2-201ENST00000376387 SPRR5A0A1B0GTR4 108 aa4.91□□□□□ -1.62
TM9SF2-201ENST00000376387 FAT4Q6V0I7 4981 aa4.89□□□□□ -1.63
TM9SF2-201ENST00000376387 LCE2AQ5TA79 106 aaPredicted RBP4.87□□□□□ -1.63
TM9SF2-201ENST00000376387 LCE3AQ5TA76 89 aa4.75□□□□□ -1.65
TM9SF2-201ENST00000376387 KRTAP19-1Q8IUB9 90 aa4.74□□□□□ -1.65
TM9SF2-201ENST00000376387 SPRR2GQ9BYE4 73 aa4.71□□□□□ -1.66
TM9SF2-201ENST00000376387 UBR4Q5T4S7 5183 aa4.68□□□□□ -1.66
TM9SF2-201ENST00000376387 RNF213Q63HN8 5207 aa4.67□□□□□ -1.66
TM9SF2-201ENST00000376387 LCE2DQ5TA82 110 aaPredicted RBP4.61□□□□□ -1.67
TM9SF2-201ENST00000376387 LCE2BO14633 110 aa4.6□□□□□ -1.67
TM9SF2-201ENST00000376387 M0R2T5 61 aa4.59□□□□□ -1.67
TM9SF2-201ENST00000376387 MT1FP04733 61 aa4.58□□□□□ -1.68
TM9SF2-201ENST00000376387 MT1HP80294 61 aa4.57□□□□□ -1.68
TM9SF2-201ENST00000376387 KRTAP8-1Q8IUC2 63 aa4.55□□□□□ -1.68
TM9SF2-201ENST00000376387 KRTAP10-10P60014 251 aa4.54□□□□□ -1.68
TM9SF2-201ENST00000376387 MT2AP02795 61 aa4.54□□□□□ -1.68
TM9SF2-201ENST00000376387 KRTAP10-5P60370 271 aa4.5□□□□□ -1.69
TM9SF2-201ENST00000376387 MT1XP80297 61 aa4.48□□□□□ -1.69
TM9SF2-201ENST00000376387 KRTAP9-8Q9BYQ0 159 aa4.48□□□□□ -1.69
TM9SF2-201ENST00000376387 KRTAP12-3P60328 96 aa4.47□□□□□ -1.69
TM9SF2-201ENST00000376387 MT1BP07438 61 aa4.46□□□□□ -1.7
TM9SF2-201ENST00000376387 KRTAP19-8Q3LI54 63 aa4.44□□□□□ -1.7
TM9SF2-201ENST00000376387 KRTAP10-12P60413 245 aa4.43□□□□□ -1.7
TM9SF2-201ENST00000376387 KRTAP10-7P60409 375 aaPredicted RBP4.43□□□□□ -1.7
TM9SF2-201ENST00000376387 KMT2DO14686 5537 aa4.33□□□□□ -1.72
TM9SF2-201ENST00000376387 KRTAP9-3Q9BYQ3 159 aa4.27□□□□□ -1.73
TM9SF2-201ENST00000376387 USH2AO75445 5202 aa4.26□□□□□ -1.73
TM9SF2-201ENST00000376387 KRTAP19-5Q3LI72 72 aa4.25□□□□□ -1.73
TM9SF2-201ENST00000376387 LCE3CQ5T5A8 94 aa4.22□□□□□ -1.73
TM9SF2-201ENST00000376387 KRTAP9-6A8MVA2 160 aa4.19□□□□□ -1.74
TM9SF2-201ENST00000376387 KRTAP4-8A0A0G2JLE6 195 aa4.14□□□□□ -1.75
TM9SF2-201ENST00000376387 KRTAP4-8Q9BYQ9 185 aa4.14□□□□□ -1.75
TM9SF2-201ENST00000376387 LCE1EQ5T753 118 aa4.11□□□□□ -1.75
TM9SF2-201ENST00000376387 KRTAP4-7Q9BYR0 210 aa4.1□□□□□ -1.75
TM9SF2-201ENST00000376387 LCE1AQ5T7P2 110 aa4.07□□□□□ -1.76
TM9SF2-201ENST00000376387 KRTAP2-2Q9BYT5 123 aa4.06□□□□□ -1.76
TM9SF2-201ENST00000376387 KRTAP2-3P0C7H8 128 aa4.02□□□□□ -1.77
TM9SF2-201ENST00000376387 KRTAP2-4Q9BYR9 128 aa4.02□□□□□ -1.77
TM9SF2-201ENST00000376387 KRTAP2-1Q9BYU5 128 aa4.02□□□□□ -1.77
TM9SF2-201ENST00000376387 KRTAP19-7Q3SYF9 63 aa4□□□□□ -1.77
TM9SF2-201ENST00000376387 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
TM9SF2-201ENST00000376387 MT1LQ93083 61 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 296.9 ms