RNA–Protein interactions for RNA: ENST00000376230.7

ZNF550-203, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,719 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-203ENST00000376230 KRTAP3-1Q9BYR8 98 aa5.27□□□□□ -1.57
ZNF550-203ENST00000376230 XP32Q5T750 250 aa5.27□□□□□ -1.57
ZNF550-203ENST00000376230 FAT2Q9NYQ8 4349 aa5.25□□□□□ -1.57
ZNF550-203ENST00000376230 KRTAP10-8P60410 259 aa5.25□□□□□ -1.57
ZNF550-203ENST00000376230 ROMO1P60602 79 aa5.24□□□□□ -1.57
ZNF550-203ENST00000376230 RYR1P21817 5038 aa5.23□□□□□ -1.57
ZNF550-203ENST00000376230 RPS29P62273 56 aaKnown RBP5.23□□□□□ -1.57
ZNF550-203ENST00000376230 C10orf95Q9H7T3 257 aa5.23□□□□□ -1.57
ZNF550-203ENST00000376230 RPL37P61927 97 aaKnown RBP5.22□□□□□ -1.57
ZNF550-203ENST00000376230 SACSQ9NZJ4 4579 aa5.22□□□□□ -1.57
ZNF550-203ENST00000376230 KRTAP4-5Q9BYR2 181 aa5.21□□□□□ -1.57
ZNF550-203ENST00000376230 APOBP04114 4563 aaKnown RBP5.21□□□□□ -1.58
ZNF550-203ENST00000376230 KRTAP10-4P60372 401 aaPredicted RBP5.21□□□□□ -1.58
ZNF550-203ENST00000376230 P0C880 135 aa5.18□□□□□ -1.58
ZNF550-203ENST00000376230 RYR3Q15413 4870 aa5.17□□□□□ -1.58
ZNF550-203ENST00000376230 KRTAP17-1Q9BYP8 105 aa5.14□□□□□ -1.59
ZNF550-203ENST00000376230 M0QZ58 72 aa5.13□□□□□ -1.59
ZNF550-203ENST00000376230 R4GN34 69 aa5.12□□□□□ -1.59
ZNF550-203ENST00000376230 KRTAP13-4Q3LI77 160 aa5.11□□□□□ -1.59
ZNF550-203ENST00000376230 PKD1P98161 4303 aa5.08□□□□□ -1.6
ZNF550-203ENST00000376230 M0R2T5 61 aa5.08□□□□□ -1.6
ZNF550-203ENST00000376230 NDUFAF8A1L188 74 aa5.07□□□□□ -1.6
ZNF550-203ENST00000376230 MT1HL1P0DM35 61 aa5.07□□□□□ -1.6
ZNF550-203ENST00000376230 TPRXLQ17RH7 258 aa5.06□□□□□ -1.6
ZNF550-203ENST00000376230 SEC61BP60468 96 aaKnown RBP5.05□□□□□ -1.6
ZNF550-203ENST00000376230 RYR2Q92736 4967 aa5.04□□□□□ -1.6
ZNF550-203ENST00000376230 KRTAP10-6P60371 365 aaPredicted RBP5.03□□□□□ -1.6
ZNF550-203ENST00000376230 CAMK2N1Q7Z7J9 78 aa5.02□□□□□ -1.61
ZNF550-203ENST00000376230 LRP2P98164 4655 aa5.02□□□□□ -1.61
ZNF550-203ENST00000376230 KRTAP12-2P59991 146 aa5□□□□□ -1.61
ZNF550-203ENST00000376230 KRTAP3-3Q9BYR6 98 aa4.99□□□□□ -1.61
ZNF550-203ENST00000376230 EPPK1P58107 5090 aaKnown RBP4.95□□□□□ -1.62
ZNF550-203ENST00000376230 KRTAP3-2Q9BYR7 98 aa4.95□□□□□ -1.62
ZNF550-203ENST00000376230 HSPG2P98160 4391 aa4.95□□□□□ -1.62
ZNF550-203ENST00000376230 LPAP08519 4548 aa4.95□□□□□ -1.62
ZNF550-203ENST00000376230 KRTAP12-1P59990 96 aa4.88□□□□□ -1.63
ZNF550-203ENST00000376230 MUC2Q02817 5179 aa4.85□□□□□ -1.63
ZNF550-203ENST00000376230 ABCA13Q86UQ4 5058 aa4.83□□□□□ -1.64
ZNF550-203ENST00000376230 HERC2O95714 4834 aa4.82□□□□□ -1.64
ZNF550-203ENST00000376230 PKHD1L1Q86WI1 4243 aa4.82□□□□□ -1.64
ZNF550-203ENST00000376230 LORP23490 312 aaPredicted RBP4.81□□□□□ -1.64
ZNF550-203ENST00000376230 KRTAP4-1Q9BYQ7 146 aa4.8□□□□□ -1.64
ZNF550-203ENST00000376230 KRTAP15-1Q3LI76 137 aa4.77□□□□□ -1.65
ZNF550-203ENST00000376230 PLAC4Q8WY50 150 aa4.7□□□□□ -1.66
ZNF550-203ENST00000376230 TNXBP22105 4242 aa4.7□□□□□ -1.66
ZNF550-203ENST00000376230 RNF213Q63HN8 5207 aa4.69□□□□□ -1.66
ZNF550-203ENST00000376230 LUZP6Q538Z0 58 aa4.69□□□□□ -1.66
ZNF550-203ENST00000376230 HERC1Q15751 4861 aa4.66□□□□□ -1.66
ZNF550-203ENST00000376230 KRTAP10-10P60014 251 aa4.66□□□□□ -1.66
ZNF550-203ENST00000376230 FAT4Q6V0I7 4981 aa4.63□□□□□ -1.67
ZNF550-203ENST00000376230 PCLOQ9Y6V0 5065 aa4.59□□□□□ -1.68
ZNF550-203ENST00000376230 TNP1P09430 55 aa4.52□□□□□ -1.69
ZNF550-203ENST00000376230 UBR4Q5T4S7 5183 aa4.51□□□□□ -1.69
ZNF550-203ENST00000376230 A0A0A0MQY5 61 aa4.5□□□□□ -1.69
ZNF550-203ENST00000376230 FSIP2Q5CZC0 6907 aa4.44□□□□□ -1.7
ZNF550-203ENST00000376230 BIRC6Q9NR09 4857 aa4.43□□□□□ -1.7
ZNF550-203ENST00000376230 PP632Q6XCG6 107 aa4.41□□□□□ -1.7
ZNF550-203ENST00000376230 HMCN2Q8NDA2 5059 aa4.35□□□□□ -1.71
ZNF550-203ENST00000376230 MT1HP80294 61 aa4.29□□□□□ -1.72
ZNF550-203ENST00000376230 MUC17Q685J3 4493 aa4.27□□□□□ -1.73
ZNF550-203ENST00000376230 MT1FP04733 61 aa4.26□□□□□ -1.73
ZNF550-203ENST00000376230 KRTAP19-2Q3LHN2 52 aa4.24□□□□□ -1.73
ZNF550-203ENST00000376230 MT2AP02795 61 aa4.23□□□□□ -1.73
ZNF550-203ENST00000376230 LCE3AQ5TA76 89 aa4.21□□□□□ -1.74
ZNF550-203ENST00000376230 LCE2CQ5TA81 110 aa4.21□□□□□ -1.74
ZNF550-203ENST00000376230 USH2AO75445 5202 aa4.2□□□□□ -1.74
ZNF550-203ENST00000376230 KRTAP19-1Q8IUB9 90 aa4.17□□□□□ -1.74
ZNF550-203ENST00000376230 FLGP20930 4061 aaPredicted RBP4.15□□□□□ -1.75
ZNF550-203ENST00000376230 PRO2289Q9P1D8 64 aa4.08□□□□□ -1.76
ZNF550-203ENST00000376230 KRTAP10-12P60413 245 aa4.08□□□□□ -1.76
ZNF550-203ENST00000376230 SPRR2GQ9BYE4 73 aa4.08□□□□□ -1.76
ZNF550-203ENST00000376230 KRTAP9-8Q9BYQ0 159 aa4.06□□□□□ -1.76
ZNF550-203ENST00000376230 KMT2DO14686 5537 aa4.04□□□□□ -1.76
ZNF550-203ENST00000376230 KRTAP12-3P60328 96 aa4.01□□□□□ -1.77
ZNF550-203ENST00000376230 OBSCNQ5VST9 7968 aa4.01□□□□□ -1.77
ZNF550-203ENST00000376230 KRTAP10-7P60409 375 aaPredicted RBP4□□□□□ -1.77
ZNF550-203ENST00000376230 MT1BP07438 61 aa3.97□□□□□ -1.77
ZNF550-203ENST00000376230 KRTAP23-1A1A580 65 aa3.96□□□□□ -1.78
ZNF550-203ENST00000376230 CRCT1Q9UGL9 99 aa3.95□□□□□ -1.78
ZNF550-203ENST00000376230 SPRR5A0A1B0GTR4 108 aa3.94□□□□□ -1.78
ZNF550-203ENST00000376230 KRTAP4-8A0A0G2JLE6 195 aa3.94□□□□□ -1.78
ZNF550-203ENST00000376230 KRTAP4-8Q9BYQ9 185 aa3.94□□□□□ -1.78
ZNF550-203ENST00000376230 MT1XP80297 61 aa3.93□□□□□ -1.78
ZNF550-203ENST00000376230 KRTAP10-5P60370 271 aa3.92□□□□□ -1.78
ZNF550-203ENST00000376230 DSTQ03001 7570 aaKnown RBP3.9□□□□□ -1.78
ZNF550-203ENST00000376230 KRTAP9-3Q9BYQ3 159 aa3.87□□□□□ -1.79
ZNF550-203ENST00000376230 LCE2BO14633 110 aa3.87□□□□□ -1.79
ZNF550-203ENST00000376230 KRTAP19-5Q3LI72 72 aa3.86□□□□□ -1.79
ZNF550-203ENST00000376230 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
ZNF550-203ENST00000376230 KRTAP19-8Q3LI54 63 aa3.84□□□□□ -1.8
ZNF550-203ENST00000376230 KRTAP8-1Q8IUC2 63 aa3.82□□□□□ -1.8
ZNF550-203ENST00000376230 KRTAP4-7Q9BYR0 210 aa3.78□□□□□ -1.8
ZNF550-203ENST00000376230 INE1O15225 51 aa3.76□□□□□ -1.81
ZNF550-203ENST00000376230 FCGBPQ9Y6R7 5405 aaPredicted RBP3.76□□□□□ -1.81
ZNF550-203ENST00000376230 MUC12Q9UKN1 5478 aa3.64□□□□□ -1.83
ZNF550-203ENST00000376230 LCE3CQ5T5A8 94 aa3.62□□□□□ -1.83
ZNF550-203ENST00000376230 LCE2AQ5TA79 106 aaPredicted RBP3.61□□□□□ -1.83
ZNF550-203ENST00000376230 SYNE2Q8WXH0 6885 aaKnown RBP3.58□□□□□ -1.84
ZNF550-203ENST00000376230 SSPOA2VEC9 5147 aa3.57□□□□□ -1.84
ZNF550-203ENST00000376230 SPRR2FQ96RM1 72 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms