RNA–Protein interactions for RNA: ENST00000376188.1

PPP1R3F-202, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 2,443 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-202ENST00000376188 MYCBP2O75592 4640 aa9.78□□□□□ -0.84
PPP1R3F-202ENST00000376188 EPPK1P58107 5090 aaKnown RBP9.71□□□□□ -0.85
PPP1R3F-202ENST00000376188 TPRXLQ17RH7 258 aa9.68□□□□□ -0.86
PPP1R3F-202ENST00000376188 A0A1B0GU33 70 aa9.66□□□□□ -0.86
PPP1R3F-202ENST00000376188 H1FX-AS1Q4G0G2 97 aa9.63□□□□□ -0.87
PPP1R3F-202ENST00000376188 H0YAA0 97 aa9.61□□□□□ -0.87
PPP1R3F-202ENST00000376188 KRTAP3-3Q9BYR6 98 aa9.59□□□□□ -0.87
PPP1R3F-202ENST00000376188 S4R3F8 94 aa9.58□□□□□ -0.88
PPP1R3F-202ENST00000376188 KRTAP4-5Q9BYR2 181 aa9.54□□□□□ -0.88
PPP1R3F-202ENST00000376188 LRP2P98164 4655 aa9.47□□□□□ -0.89
PPP1R3F-202ENST00000376188 RBM12B-AS1Q9P1G2 102 aa9.45□□□□□ -0.9
PPP1R3F-202ENST00000376188 KRTAP10-6P60371 365 aaPredicted RBP9.44□□□□□ -0.9
PPP1R3F-202ENST00000376188 ABCA13Q86UQ4 5058 aa9.4□□□□□ -0.9
PPP1R3F-202ENST00000376188 KRTAP3-2Q9BYR7 98 aa9.39□□□□□ -0.91
PPP1R3F-202ENST00000376188 LPAP08519 4548 aa9.39□□□□□ -0.91
PPP1R3F-202ENST00000376188 ADM2Q7Z4H4 148 aa9.36□□□□□ -0.91
PPP1R3F-202ENST00000376188 PRAC1Q96KF2 57 aa9.35□□□□□ -0.91
PPP1R3F-202ENST00000376188 J3QL48 77 aa9.34□□□□□ -0.91
PPP1R3F-202ENST00000376188 K7ERS5 55 aa9.33□□□□□ -0.92
PPP1R3F-202ENST00000376188 SEC61BP60468 96 aaKnown RBP9.33□□□□□ -0.92
PPP1R3F-202ENST00000376188 CSAG1Q6PB30 78 aa9.3□□□□□ -0.92
PPP1R3F-202ENST00000376188 P0C880 135 aa9.27□□□□□ -0.93
PPP1R3F-202ENST00000376188 KRTAP13-4Q3LI77 160 aa9.26□□□□□ -0.93
PPP1R3F-202ENST00000376188 HERC2O95714 4834 aa9.22□□□□□ -0.93
PPP1R3F-202ENST00000376188 A0A0D9SG42 100 aa9.16□□□□□ -0.94
PPP1R3F-202ENST00000376188 MUC17Q685J3 4493 aa9.13□□□□□ -0.95
PPP1R3F-202ENST00000376188 BIRC6Q9NR09 4857 aa9.12□□□□□ -0.95
PPP1R3F-202ENST00000376188 M0QZ58 72 aa9.08□□□□□ -0.96
PPP1R3F-202ENST00000376188 KRTAP4-1Q9BYQ7 146 aa9.07□□□□□ -0.96
PPP1R3F-202ENST00000376188 ROMO1P60602 79 aa9.03□□□□□ -0.96
PPP1R3F-202ENST00000376188 LINC01554Q52M75 96 aa9.02□□□□□ -0.97
PPP1R3F-202ENST00000376188 KRTAP25-1Q3LHN0 102 aa8.99□□□□□ -0.97
PPP1R3F-202ENST00000376188 KRTAP12-2P59991 146 aa8.96□□□□□ -0.98
PPP1R3F-202ENST00000376188 KRTAP12-1P59990 96 aa8.94□□□□□ -0.98
PPP1R3F-202ENST00000376188 KRTAP19-2Q3LHN2 52 aa8.93□□□□□ -0.98
PPP1R3F-202ENST00000376188 SPINT4Q6UDR6 99 aa8.91□□□□□ -0.98
PPP1R3F-202ENST00000376188 R4GN34 69 aa8.88□□□□□ -0.99
PPP1R3F-202ENST00000376188 CRIPTQ9P021 101 aa8.82□□□□□ -1
PPP1R3F-202ENST00000376188 LORP23490 312 aaPredicted RBP8.73□□□□□ -1.01
PPP1R3F-202ENST00000376188 PCLOQ9Y6V0 5065 aa8.73□□□□□ -1.01
PPP1R3F-202ENST00000376188 FLGP20930 4061 aaPredicted RBP8.72□□□□□ -1.01
PPP1R3F-202ENST00000376188 HERC1Q15751 4861 aa8.71□□□□□ -1.01
PPP1R3F-202ENST00000376188 HMCN2Q8NDA2 5059 aa8.7□□□□□ -1.02
PPP1R3F-202ENST00000376188 MUC2Q02817 5179 aa8.66□□□□□ -1.02
PPP1R3F-202ENST00000376188 C10orf95Q9H7T3 257 aa8.6□□□□□ -1.03
PPP1R3F-202ENST00000376188 LCE2CQ5TA81 110 aa8.49□□□□□ -1.05
PPP1R3F-202ENST00000376188 CAMK2N1Q7Z7J9 78 aa8.39□□□□□ -1.07
PPP1R3F-202ENST00000376188 FAT4Q6V0I7 4981 aa8.3□□□□□ -1.08
PPP1R3F-202ENST00000376188 RNF213Q63HN8 5207 aa8.3□□□□□ -1.08
PPP1R3F-202ENST00000376188 M0R2T5 61 aa8.3□□□□□ -1.08
PPP1R3F-202ENST00000376188 MT1HP80294 61 aa8.29□□□□□ -1.08
PPP1R3F-202ENST00000376188 UBR4Q5T4S7 5183 aa8.24□□□□□ -1.09
PPP1R3F-202ENST00000376188 H3BS24 57 aa8.23□□□□□ -1.09
PPP1R3F-202ENST00000376188 SPRR2GQ9BYE4 73 aa8.23□□□□□ -1.09
PPP1R3F-202ENST00000376188 PP632Q6XCG6 107 aa8.16□□□□□ -1.1
PPP1R3F-202ENST00000376188 KRTAP19-1Q8IUB9 90 aa8.15□□□□□ -1.1
PPP1R3F-202ENST00000376188 KRTAP15-1Q3LI76 137 aa8.11□□□□□ -1.11
PPP1R3F-202ENST00000376188 PLAC4Q8WY50 150 aa8.1□□□□□ -1.11
PPP1R3F-202ENST00000376188 MT2AP02795 61 aa8.1□□□□□ -1.11
PPP1R3F-202ENST00000376188 MT1FP04733 61 aa8.08□□□□□ -1.12
PPP1R3F-202ENST00000376188 TNP1P09430 55 aa8.07□□□□□ -1.12
PPP1R3F-202ENST00000376188 KRTAP10-10P60014 251 aa8.07□□□□□ -1.12
PPP1R3F-202ENST00000376188 KRTAP9-8Q9BYQ0 159 aa8.06□□□□□ -1.12
PPP1R3F-202ENST00000376188 KRTAP23-1A1A580 65 aa7.98□□□□□ -1.13
PPP1R3F-202ENST00000376188 KRTAP19-8Q3LI54 63 aa7.91□□□□□ -1.14
PPP1R3F-202ENST00000376188 MT1BP07438 61 aa7.77□□□□□ -1.17
PPP1R3F-202ENST00000376188 NDUFAF8A1L188 74 aa7.76□□□□□ -1.17
PPP1R3F-202ENST00000376188 KRTAP9-3Q9BYQ3 159 aa7.74□□□□□ -1.17
PPP1R3F-202ENST00000376188 KRTAP10-5P60370 271 aa7.65□□□□□ -1.18
PPP1R3F-202ENST00000376188 MT1XP80297 61 aa7.65□□□□□ -1.18
PPP1R3F-202ENST00000376188 LCE3AQ5TA76 89 aa7.62□□□□□ -1.19
PPP1R3F-202ENST00000376188 LCE2AQ5TA79 106 aaPredicted RBP7.53□□□□□ -1.2
PPP1R3F-202ENST00000376188 LUZP6Q538Z0 58 aa7.52□□□□□ -1.2
PPP1R3F-202ENST00000376188 PRO2289Q9P1D8 64 aa7.51□□□□□ -1.21
PPP1R3F-202ENST00000376188 KRTAP8-1Q8IUC2 63 aa7.49□□□□□ -1.21
PPP1R3F-202ENST00000376188 KRTAP10-12P60413 245 aa7.46□□□□□ -1.22
PPP1R3F-202ENST00000376188 SPRR5A0A1B0GTR4 108 aa7.46□□□□□ -1.22
PPP1R3F-202ENST00000376188 LCE2BO14633 110 aa7.43□□□□□ -1.22
PPP1R3F-202ENST00000376188 KRTAP10-7P60409 375 aaPredicted RBP7.39□□□□□ -1.23
PPP1R3F-202ENST00000376188 KRTAP12-3P60328 96 aa7.3□□□□□ -1.24
PPP1R3F-202ENST00000376188 USH2AO75445 5202 aa7.14□□□□□ -1.27
PPP1R3F-202ENST00000376188 A0A0A0MQY5 61 aa7.09□□□□□ -1.27
PPP1R3F-202ENST00000376188 KRTAP19-5Q3LI72 72 aa7.05□□□□□ -1.28
PPP1R3F-202ENST00000376188 KRTAP4-8A0A0G2JLE6 195 aa6.95□□□□□ -1.3
PPP1R3F-202ENST00000376188 KRTAP4-8Q9BYQ9 185 aa6.95□□□□□ -1.3
PPP1R3F-202ENST00000376188 KMT2DO14686 5537 aa6.91□□□□□ -1.3
PPP1R3F-202ENST00000376188 SSPOA2VEC9 5147 aa6.87□□□□□ -1.31
PPP1R3F-202ENST00000376188 LCE3CQ5T5A8 94 aa6.86□□□□□ -1.31
PPP1R3F-202ENST00000376188 KRTAP19-6Q3LI70 58 aa6.84□□□□□ -1.32
PPP1R3F-202ENST00000376188 KRTAP19-7Q3SYF9 63 aa6.82□□□□□ -1.32
PPP1R3F-202ENST00000376188 KRTAP19-4Q3LI73 84 aa6.72□□□□□ -1.33
PPP1R3F-202ENST00000376188 MT1EP04732 61 aa6.66□□□□□ -1.34
PPP1R3F-202ENST00000376188 MT1LQ93083 61 aa6.61□□□□□ -1.35
PPP1R3F-202ENST00000376188 LCE2DQ5TA82 110 aaPredicted RBP6.6□□□□□ -1.35
PPP1R3F-202ENST00000376188 FSIP2Q5CZC0 6907 aa6.56□□□□□ -1.36
PPP1R3F-202ENST00000376188 KRTAP9-6A8MVA2 160 aa6.52□□□□□ -1.37
PPP1R3F-202ENST00000376188 KRTAP4-7Q9BYR0 210 aa6.51□□□□□ -1.37
PPP1R3F-202ENST00000376188 FCGBPQ9Y6R7 5405 aaPredicted RBP6.4□□□□□ -1.38
PPP1R3F-202ENST00000376188 INE1O15225 51 aa6.38□□□□□ -1.39
PPP1R3F-202ENST00000376188 KRTAP19-3Q7Z4W3 81 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms