RNA–Protein interactions for RNA: ENST00000376108.7

CLCN5-204, Transcript of chloride voltage-gated channel 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN5, Length 2,660 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN5-204ENST00000376108 DNAH3Q8TD57 4116 aa4.36□□□□□ -1.71
CLCN5-204ENST00000376108 LCE2AQ5TA79 106 aaPredicted RBP4.34□□□□□ -1.72
CLCN5-204ENST00000376108 RYR2Q92736 4967 aa4.32□□□□□ -1.72
CLCN5-204ENST00000376108 EPPK1P58107 5090 aaKnown RBP4.31□□□□□ -1.72
CLCN5-204ENST00000376108 KMT2AQ03164 3969 aa4.3□□□□□ -1.72
CLCN5-204ENST00000376108 INE1O15225 51 aa4.29□□□□□ -1.72
CLCN5-204ENST00000376108 SACSQ9NZJ4 4579 aa4.27□□□□□ -1.73
CLCN5-204ENST00000376108 DNAH11Q96DT5 4516 aa4.26□□□□□ -1.73
CLCN5-204ENST00000376108 C9orf92A6NGG3 77 aa4.24□□□□□ -1.73
CLCN5-204ENST00000376108 DNAH7Q8WXX0 4024 aa4.23□□□□□ -1.73
CLCN5-204ENST00000376108 LORP23490 312 aaPredicted RBP4.22□□□□□ -1.73
CLCN5-204ENST00000376108 PP632Q6XCG6 107 aa4.22□□□□□ -1.73
CLCN5-204ENST00000376108 HERC2O95714 4834 aa4.22□□□□□ -1.73
CLCN5-204ENST00000376108 M0QZ58 72 aa4.21□□□□□ -1.73
CLCN5-204ENST00000376108 HECTD4Q9Y4D8 3996 aa4.21□□□□□ -1.74
CLCN5-204ENST00000376108 SPRR5A0A1B0GTR4 108 aa4.21□□□□□ -1.74
CLCN5-204ENST00000376108 HUWE1Q7Z6Z7 4374 aaKnown RBP4.2□□□□□ -1.74
CLCN5-204ENST00000376108 KRTAP1-4P0C5Y4 121 aa4.19□□□□□ -1.74
CLCN5-204ENST00000376108 HYDINQ4G0P3 5121 aa4.17□□□□□ -1.74
CLCN5-204ENST00000376108 DNAH6Q9C0G6 4158 aa4.14□□□□□ -1.75
CLCN5-204ENST00000376108 MYCBP2O75592 4640 aa4.11□□□□□ -1.75
CLCN5-204ENST00000376108 KRTAP23-1A1A580 65 aa4.11□□□□□ -1.75
CLCN5-204ENST00000376108 RPS29P62273 56 aaKnown RBP4.11□□□□□ -1.75
CLCN5-204ENST00000376108 DNAH2Q9P225 4427 aa4.11□□□□□ -1.75
CLCN5-204ENST00000376108 STARD9Q9P2P6 4700 aa4.11□□□□□ -1.75
CLCN5-204ENST00000376108 PLECQ15149 4684 aaKnown RBP4.1□□□□□ -1.75
CLCN5-204ENST00000376108 PCLOQ9Y6V0 5065 aa4.08□□□□□ -1.76
CLCN5-204ENST00000376108 RYR1P21817 5038 aa4.05□□□□□ -1.76
CLCN5-204ENST00000376108 KRTAP10-2P60368 255 aa4□□□□□ -1.77
CLCN5-204ENST00000376108 LRP1BQ9NZR2 4599 aa4□□□□□ -1.77
CLCN5-204ENST00000376108 APOBP04114 4563 aaKnown RBP3.99□□□□□ -1.77
CLCN5-204ENST00000376108 KIAA1109Q2LD37 5005 aa3.99□□□□□ -1.77
CLCN5-204ENST00000376108 KRTAP4-5Q9BYR2 181 aa3.97□□□□□ -1.77
CLCN5-204ENST00000376108 A0A1B0GVY2 172 aa3.97□□□□□ -1.77
CLCN5-204ENST00000376108 DYNC1H1Q14204 4646 aaKnown RBP3.96□□□□□ -1.78
CLCN5-204ENST00000376108 ABCA13Q86UQ4 5058 aa3.95□□□□□ -1.78
CLCN5-204ENST00000376108 VPS13BQ7Z7G8 4022 aa3.95□□□□□ -1.78
CLCN5-204ENST00000376108 KRTAP10-1P60331 282 aa3.95□□□□□ -1.78
CLCN5-204ENST00000376108 DNAH5Q8TE73 4624 aa3.93□□□□□ -1.78
CLCN5-204ENST00000376108 Q5VSD8 79 aa3.9□□□□□ -1.78
CLCN5-204ENST00000376108 PKHD1P08F94 4074 aa3.88□□□□□ -1.79
CLCN5-204ENST00000376108 FAT2Q9NYQ8 4349 aa3.87□□□□□ -1.79
CLCN5-204ENST00000376108 HSPG2P98160 4391 aa3.86□□□□□ -1.79
CLCN5-204ENST00000376108 PKD1P98161 4303 aa3.86□□□□□ -1.79
CLCN5-204ENST00000376108 LRP1Q07954 4544 aaKnown RBP3.81□□□□□ -1.8
CLCN5-204ENST00000376108 HERC1Q15751 4861 aa3.8□□□□□ -1.8
CLCN5-204ENST00000376108 TNP1P09430 55 aa3.79□□□□□ -1.8
CLCN5-204ENST00000376108 PKHD1L1Q86WI1 4243 aa3.77□□□□□ -1.81
CLCN5-204ENST00000376108 SMR3BP02814 79 aaPredicted RBP3.74□□□□□ -1.81
CLCN5-204ENST00000376108 UBR4Q5T4S7 5183 aa3.7□□□□□ -1.82
CLCN5-204ENST00000376108 TNXBP22105 4242 aa3.66□□□□□ -1.82
CLCN5-204ENST00000376108 FAT3Q8TDW7 4589 aa3.64□□□□□ -1.83
CLCN5-204ENST00000376108 KRTAP10-10P60014 251 aa3.64□□□□□ -1.83
CLCN5-204ENST00000376108 HMCN2Q8NDA2 5059 aa3.62□□□□□ -1.83
CLCN5-204ENST00000376108 KRTAP10-4P60372 401 aaPredicted RBP3.6□□□□□ -1.83
CLCN5-204ENST00000376108 FAT1Q14517 4588 aa3.59□□□□□ -1.83
CLCN5-204ENST00000376108 LPAP08519 4548 aa3.58□□□□□ -1.84
CLCN5-204ENST00000376108 KRTAP9-6A0A140TA67 174 aa3.56□□□□□ -1.84
CLCN5-204ENST00000376108 KRTAP9-2Q9BYQ4 174 aa3.55□□□□□ -1.84
CLCN5-204ENST00000376108 LCE3AQ5TA76 89 aa3.51□□□□□ -1.85
CLCN5-204ENST00000376108 RNF213Q63HN8 5207 aa3.47□□□□□ -1.85
CLCN5-204ENST00000376108 MT1HL1P0DM35 61 aa3.46□□□□□ -1.86
CLCN5-204ENST00000376108 KRTAP10-12P60413 245 aa3.46□□□□□ -1.86
CLCN5-204ENST00000376108 FLGP20930 4061 aaPredicted RBP3.44□□□□□ -1.86
CLCN5-204ENST00000376108 LRP2P98164 4655 aa3.43□□□□□ -1.86
CLCN5-204ENST00000376108 KRTAP8-1Q8IUC2 63 aa3.41□□□□□ -1.86
CLCN5-204ENST00000376108 FAT4Q6V0I7 4981 aa3.36□□□□□ -1.87
CLCN5-204ENST00000376108 CRCT1Q9UGL9 99 aa3.31□□□□□ -1.88
CLCN5-204ENST00000376108 KRTAP12-3P60328 96 aa3.3□□□□□ -1.88
CLCN5-204ENST00000376108 KRTAP10-5P60370 271 aa3.27□□□□□ -1.89
CLCN5-204ENST00000376108 KRTAP2-3P0C7H8 128 aa3.26□□□□□ -1.89
CLCN5-204ENST00000376108 KRTAP2-4Q9BYR9 128 aa3.26□□□□□ -1.89
CLCN5-204ENST00000376108 KRTAP2-1Q9BYU5 128 aa3.26□□□□□ -1.89
CLCN5-204ENST00000376108 MUC17Q685J3 4493 aa3.21□□□□□ -1.9
CLCN5-204ENST00000376108 MUC2Q02817 5179 aa3.2□□□□□ -1.9
CLCN5-204ENST00000376108 KRTAP4-1Q9BYQ7 146 aa3.2□□□□□ -1.9
CLCN5-204ENST00000376108 KRTAP19-4Q3LI73 84 aa3.2□□□□□ -1.9
CLCN5-204ENST00000376108 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
CLCN5-204ENST00000376108 KRTAP19-2Q3LHN2 52 aa3.18□□□□□ -1.9
CLCN5-204ENST00000376108 KRTAP2-2Q9BYT5 123 aa3.18□□□□□ -1.9
CLCN5-204ENST00000376108 LOC100996750A0A140TA64 210 aa3.17□□□□□ -1.9
CLCN5-204ENST00000376108 KRTAP4-6Q9BYQ5 205 aa3.17□□□□□ -1.9
CLCN5-204ENST00000376108 KRTAP19-1Q8IUB9 90 aa3.16□□□□□ -1.9
CLCN5-204ENST00000376108 KRTAP9-7A8MTY7 169 aa3.15□□□□□ -1.91
CLCN5-204ENST00000376108 LCE3CQ5T5A8 94 aa3.15□□□□□ -1.91
CLCN5-204ENST00000376108 M0R2T5 61 aa3.12□□□□□ -1.91
CLCN5-204ENST00000376108 SPRR2GQ9BYE4 73 aa3.12□□□□□ -1.91
CLCN5-204ENST00000376108 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
CLCN5-204ENST00000376108 KRTAP10-7P60409 375 aaPredicted RBP3.11□□□□□ -1.91
CLCN5-204ENST00000376108 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.1□□□□□ -1.91
CLCN5-204ENST00000376108 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
CLCN5-204ENST00000376108 KRTAP4-8Q9BYQ9 185 aa3.06□□□□□ -1.92
CLCN5-204ENST00000376108 KRTAP6-3Q3LI67 103 aa3.06□□□□□ -1.92
CLCN5-204ENST00000376108 FSIP2Q5CZC0 6907 aa3.05□□□□□ -1.92
CLCN5-204ENST00000376108 LCE1AQ5T7P2 110 aa3.05□□□□□ -1.92
CLCN5-204ENST00000376108 KRTAP12-4P60329 112 aa3.04□□□□□ -1.92
CLCN5-204ENST00000376108 LCE3BQ5TA77 95 aa3.01□□□□□ -1.93
CLCN5-204ENST00000376108 KRTAP9-4Q9BYQ2 154 aa2.99□□□□□ -1.93
CLCN5-204ENST00000376108 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
CLCN5-204ENST00000376108 MT1HP80294 61 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms