RNA–Protein interactions for RNA: ENST00000375987.3

LINC01854-201, Transcript of long intergenic non-protein coding RNA 1854, humanhuman

TSL 2 BASIC

Gene LINC01854, Length 2,213 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01854-201ENST00000375987 P0C880 135 aa5.5□□□□□ -1.53
LINC01854-201ENST00000375987 RPL37P61927 97 aaKnown RBP5.48□□□□□ -1.53
LINC01854-201ENST00000375987 LUZP6Q538Z0 58 aa5.48□□□□□ -1.53
LINC01854-201ENST00000375987 SPINT4Q6UDR6 99 aa5.42□□□□□ -1.54
LINC01854-201ENST00000375987 FAT1Q14517 4588 aa5.42□□□□□ -1.54
LINC01854-201ENST00000375987 PKHD1L1Q86WI1 4243 aa5.41□□□□□ -1.54
LINC01854-201ENST00000375987 KRTAP10-6P60371 365 aaPredicted RBP5.4□□□□□ -1.55
LINC01854-201ENST00000375987 RYR1P21817 5038 aa5.39□□□□□ -1.55
LINC01854-201ENST00000375987 EPPK1P58107 5090 aaKnown RBP5.39□□□□□ -1.55
LINC01854-201ENST00000375987 A0A0D9SG42 100 aa5.39□□□□□ -1.55
LINC01854-201ENST00000375987 TPRXLQ17RH7 258 aa5.38□□□□□ -1.55
LINC01854-201ENST00000375987 KRTAP13-4Q3LI77 160 aa5.38□□□□□ -1.55
LINC01854-201ENST00000375987 KRTAP10-4P60372 401 aaPredicted RBP5.37□□□□□ -1.55
LINC01854-201ENST00000375987 HSPG2P98160 4391 aa5.37□□□□□ -1.55
LINC01854-201ENST00000375987 DMBT1Q9UGM3 2413 aaPredicted RBP5.35□□□□□ -1.55
LINC01854-201ENST00000375987 KIAA1109Q2LD37 5005 aa5.35□□□□□ -1.55
LINC01854-201ENST00000375987 KRTAP3-3Q9BYR6 98 aa5.34□□□□□ -1.55
LINC01854-201ENST00000375987 SMR3BP02814 79 aaPredicted RBP5.33□□□□□ -1.56
LINC01854-201ENST00000375987 NDUFAF8A1L188 74 aa5.32□□□□□ -1.56
LINC01854-201ENST00000375987 KRTAP17-1Q9BYP8 105 aa5.32□□□□□ -1.56
LINC01854-201ENST00000375987 KRTAP3-2Q9BYR7 98 aa5.32□□□□□ -1.56
LINC01854-201ENST00000375987 C10orf95Q9H7T3 257 aa5.31□□□□□ -1.56
LINC01854-201ENST00000375987 S4R3F8 94 aa5.31□□□□□ -1.56
LINC01854-201ENST00000375987 KRTAP15-1Q3LI76 137 aa5.28□□□□□ -1.56
LINC01854-201ENST00000375987 KRTAP12-2P59991 146 aa5.24□□□□□ -1.57
LINC01854-201ENST00000375987 BIRC6Q9NR09 4857 aa5.22□□□□□ -1.57
LINC01854-201ENST00000375987 Q5VSD8 79 aa5.21□□□□□ -1.58
LINC01854-201ENST00000375987 LRP1Q07954 4544 aaKnown RBP5.21□□□□□ -1.58
LINC01854-201ENST00000375987 FAT3Q8TDW7 4589 aa5.2□□□□□ -1.58
LINC01854-201ENST00000375987 KRTAP10-8P60410 259 aa5.2□□□□□ -1.58
LINC01854-201ENST00000375987 KRTAP12-1P59990 96 aa5.19□□□□□ -1.58
LINC01854-201ENST00000375987 TNXBP22105 4242 aa5.18□□□□□ -1.58
LINC01854-201ENST00000375987 CAMK2N1Q7Z7J9 78 aa5.16□□□□□ -1.58
LINC01854-201ENST00000375987 HERC2O95714 4834 aa5.15□□□□□ -1.59
LINC01854-201ENST00000375987 M0QZ58 72 aa5.13□□□□□ -1.59
LINC01854-201ENST00000375987 KRTAP4-5Q9BYR2 181 aa5.13□□□□□ -1.59
LINC01854-201ENST00000375987 MYCBP2O75592 4640 aa5.12□□□□□ -1.59
LINC01854-201ENST00000375987 ABCA13Q86UQ4 5058 aa5.11□□□□□ -1.59
LINC01854-201ENST00000375987 LOC100996750A0A140TA64 210 aa5.08□□□□□ -1.6
LINC01854-201ENST00000375987 KRTAP4-6Q9BYQ5 205 aa5.08□□□□□ -1.6
LINC01854-201ENST00000375987 MT1HL1P0DM35 61 aa5.08□□□□□ -1.6
LINC01854-201ENST00000375987 KRTAP9-8Q9BYQ0 159 aa5.04□□□□□ -1.6
LINC01854-201ENST00000375987 R4GN34 69 aa4.96□□□□□ -1.62
LINC01854-201ENST00000375987 PLAC4Q8WY50 150 aa4.95□□□□□ -1.62
LINC01854-201ENST00000375987 PCLOQ9Y6V0 5065 aa4.93□□□□□ -1.62
LINC01854-201ENST00000375987 LPAP08519 4548 aa4.92□□□□□ -1.62
LINC01854-201ENST00000375987 KRTAP23-1A1A580 65 aa4.92□□□□□ -1.62
LINC01854-201ENST00000375987 LRP2P98164 4655 aa4.85□□□□□ -1.63
LINC01854-201ENST00000375987 PP632Q6XCG6 107 aa4.84□□□□□ -1.64
LINC01854-201ENST00000375987 HERC1Q15751 4861 aa4.79□□□□□ -1.64
LINC01854-201ENST00000375987 KRTAP5-3Q6L8H2 238 aa4.77□□□□□ -1.65
LINC01854-201ENST00000375987 LORP23490 312 aaPredicted RBP4.76□□□□□ -1.65
LINC01854-201ENST00000375987 HMCN2Q8NDA2 5059 aa4.75□□□□□ -1.65
LINC01854-201ENST00000375987 PRO2289Q9P1D8 64 aa4.7□□□□□ -1.66
LINC01854-201ENST00000375987 MUC17Q685J3 4493 aa4.7□□□□□ -1.66
LINC01854-201ENST00000375987 KRTAP4-1Q9BYQ7 146 aa4.61□□□□□ -1.67
LINC01854-201ENST00000375987 TNP1P09430 55 aa4.6□□□□□ -1.67
LINC01854-201ENST00000375987 SPRR5A0A1B0GTR4 108 aa4.56□□□□□ -1.68
LINC01854-201ENST00000375987 UBR4Q5T4S7 5183 aa4.53□□□□□ -1.68
LINC01854-201ENST00000375987 KRTAP19-2Q3LHN2 52 aa4.52□□□□□ -1.69
LINC01854-201ENST00000375987 RNF213Q63HN8 5207 aa4.51□□□□□ -1.69
LINC01854-201ENST00000375987 MUC2Q02817 5179 aa4.5□□□□□ -1.69
LINC01854-201ENST00000375987 FLGP20930 4061 aaPredicted RBP4.45□□□□□ -1.7
LINC01854-201ENST00000375987 INE1O15225 51 aa4.4□□□□□ -1.71
LINC01854-201ENST00000375987 LCE2CQ5TA81 110 aa4.4□□□□□ -1.71
LINC01854-201ENST00000375987 FAT4Q6V0I7 4981 aa4.35□□□□□ -1.71
LINC01854-201ENST00000375987 SPRR2GQ9BYE4 73 aa4.29□□□□□ -1.72
LINC01854-201ENST00000375987 LCE3AQ5TA76 89 aa4.28□□□□□ -1.72
LINC01854-201ENST00000375987 MT1HP80294 61 aa4.26□□□□□ -1.73
LINC01854-201ENST00000375987 KRTAP19-1Q8IUB9 90 aa4.23□□□□□ -1.73
LINC01854-201ENST00000375987 KRTAP8-1Q8IUC2 63 aa4.19□□□□□ -1.74
LINC01854-201ENST00000375987 LCE2AQ5TA79 106 aaPredicted RBP4.15□□□□□ -1.75
LINC01854-201ENST00000375987 HMCN1Q96RW7 5635 aa4.13□□□□□ -1.75
LINC01854-201ENST00000375987 M0R2T5 61 aa4.13□□□□□ -1.75
LINC01854-201ENST00000375987 MT2AP02795 61 aa4.09□□□□□ -1.75
LINC01854-201ENST00000375987 KRTAP12-3P60328 96 aa4.08□□□□□ -1.76
LINC01854-201ENST00000375987 MT1FP04733 61 aa4.07□□□□□ -1.76
LINC01854-201ENST00000375987 KRTAP10-10P60014 251 aa4.07□□□□□ -1.76
LINC01854-201ENST00000375987 KRTAP10-12P60413 245 aa4.05□□□□□ -1.76
LINC01854-201ENST00000375987 KRTAP19-8Q3LI54 63 aa4.04□□□□□ -1.76
LINC01854-201ENST00000375987 KRTAP10-5P60370 271 aa4.02□□□□□ -1.77
LINC01854-201ENST00000375987 MT1XP80297 61 aa4.01□□□□□ -1.77
LINC01854-201ENST00000375987 KRTAP4-7Q9BYR0 210 aa4□□□□□ -1.77
LINC01854-201ENST00000375987 KRTAP4-8A0A0G2JLE6 195 aa3.98□□□□□ -1.77
LINC01854-201ENST00000375987 KRTAP9-3Q9BYQ3 159 aa3.98□□□□□ -1.77
LINC01854-201ENST00000375987 MT1BP07438 61 aa3.97□□□□□ -1.77
LINC01854-201ENST00000375987 KRTAP10-7P60409 375 aaPredicted RBP3.91□□□□□ -1.78
LINC01854-201ENST00000375987 KRTAP4-8Q9BYQ9 185 aa3.9□□□□□ -1.78
LINC01854-201ENST00000375987 LCE2BO14633 110 aa3.87□□□□□ -1.79
LINC01854-201ENST00000375987 LCE3CQ5T5A8 94 aa3.85□□□□□ -1.79
LINC01854-201ENST00000375987 USH2AO75445 5202 aa3.83□□□□□ -1.8
LINC01854-201ENST00000375987 KRTAP19-5Q3LI72 72 aa3.8□□□□□ -1.8
LINC01854-201ENST00000375987 LCE2DQ5TA82 110 aaPredicted RBP3.8□□□□□ -1.8
LINC01854-201ENST00000375987 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.78□□□□□ -1.8
LINC01854-201ENST00000375987 KRTAP4-2Q9BYR5 136 aa3.76□□□□□ -1.81
LINC01854-201ENST00000375987 KRTAP9-6A0A140TA67 174 aa3.75□□□□□ -1.81
LINC01854-201ENST00000375987 KRTAP9-2Q9BYQ4 174 aa3.73□□□□□ -1.81
LINC01854-201ENST00000375987 SSPOA2VEC9 5147 aa3.73□□□□□ -1.81
LINC01854-201ENST00000375987 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
LINC01854-201ENST00000375987 KRTAP2-3P0C7H8 128 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms