RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 KRTAP2-3P0C7H8 128 aa9.96□□□□□ -0.82
C9orf47-202ENST00000375850 KRTAP2-4Q9BYR9 128 aa9.96□□□□□ -0.82
C9orf47-202ENST00000375850 TRAV22A0A0B4J277 110 aa9.94□□□□□ -0.82
C9orf47-202ENST00000375850 A0A087WVE0 104 aa9.93□□□□□ -0.82
C9orf47-202ENST00000375850 NDUFC1O43677 76 aa9.93□□□□□ -0.82
C9orf47-202ENST00000375850 COL5A1-AS1Q5SY13 56 aa9.92□□□□□ -0.82
C9orf47-202ENST00000375850 PRO2289Q9P1D8 64 aa9.92□□□□□ -0.82
C9orf47-202ENST00000375850 K7EP34 96 aa9.91□□□□□ -0.82
C9orf47-202ENST00000375850 SPRR2FQ96RM1 72 aa9.85□□□□□ -0.83
C9orf47-202ENST00000375850 A8MUN3 132 aa9.83□□□□□ -0.84
C9orf47-202ENST00000375850 SPRR2EP22531 72 aa9.8□□□□□ -0.84
C9orf47-202ENST00000375850 SPRR2BP35325 72 aa9.8□□□□□ -0.84
C9orf47-202ENST00000375850 SPRR2AP35326 72 aa9.8□□□□□ -0.84
C9orf47-202ENST00000375850 ATOX1O00244 68 aa9.79□□□□□ -0.84
C9orf47-202ENST00000375850 F8W1H4 67 aa9.77□□□□□ -0.85
C9orf47-202ENST00000375850 ACYP1P07311 99 aa9.77□□□□□ -0.85
C9orf47-202ENST00000375850 GTF2H5Q6ZYL4 71 aa9.77□□□□□ -0.85
C9orf47-202ENST00000375850 UQCRQO14949 82 aa9.76□□□□□ -0.85
C9orf47-202ENST00000375850 ADM2Q7Z4H4 148 aa9.76□□□□□ -0.85
C9orf47-202ENST00000375850 MT1XP80297 61 aa9.74□□□□□ -0.85
C9orf47-202ENST00000375850 PLAC4Q8WY50 150 aa9.74□□□□□ -0.85
C9orf47-202ENST00000375850 ETDBQ3ZM63 59 aa9.72□□□□□ -0.85
C9orf47-202ENST00000375850 KRTAP8-1Q8IUC2 63 aa9.71□□□□□ -0.86
C9orf47-202ENST00000375850 H0Y9P7 68 aa9.7□□□□□ -0.86
C9orf47-202ENST00000375850 KRTAP12-2P59991 146 aa9.67□□□□□ -0.86
C9orf47-202ENST00000375850 ATP5EP2Q5VTU8 51 aa9.67□□□□□ -0.86
C9orf47-202ENST00000375850 LCE1AQ5T7P2 110 aa9.62□□□□□ -0.87
C9orf47-202ENST00000375850 KRTAP2-2Q9BYT5 123 aa9.62□□□□□ -0.87
C9orf47-202ENST00000375850 KRTAP2-1Q9BYU5 128 aa9.62□□□□□ -0.87
C9orf47-202ENST00000375850 C20orf197Q8N268 126 aa9.61□□□□□ -0.87
C9orf47-202ENST00000375850 R4GN34 69 aa9.61□□□□□ -0.87
C9orf47-202ENST00000375850 HIST1H4AP62805 103 aaKnown RBP9.59□□□□□ -0.87
C9orf47-202ENST00000375850 FAM240AA0A1B0GVK7 77 aa9.55□□□□□ -0.88
C9orf47-202ENST00000375850 LINC00208Q96KT6 92 aa9.51□□□□□ -0.89
C9orf47-202ENST00000375850 SPRR2DP22532 72 aa9.49□□□□□ -0.89
C9orf47-202ENST00000375850 M0QZ58 72 aa9.48□□□□□ -0.89
C9orf47-202ENST00000375850 MP68P56378 58 aa9.46□□□□□ -0.9
C9orf47-202ENST00000375850 P0C880 135 aa9.45□□□□□ -0.9
C9orf47-202ENST00000375850 A0A1B0GV90 55 aa9.41□□□□□ -0.9
C9orf47-202ENST00000375850 KRTAP4-8A0A0G2JLE6 195 aa9.4□□□□□ -0.9
C9orf47-202ENST00000375850 KRTAP4-8Q9BYQ9 185 aa9.4□□□□□ -0.9
C9orf47-202ENST00000375850 LINC00643Q86TS7 51 aa9.35□□□□□ -0.91
C9orf47-202ENST00000375850 OCR1Q9BZK8 76 aa9.34□□□□□ -0.91
C9orf47-202ENST00000375850 LINC01554Q52M75 96 aa9.33□□□□□ -0.92
C9orf47-202ENST00000375850 H3BPC8 53 aa9.3□□□□□ -0.92
C9orf47-202ENST00000375850 DMAC1Q96GE9 116 aa9.3□□□□□ -0.92
C9orf47-202ENST00000375850 KRTAP3-2Q9BYR7 98 aa9.3□□□□□ -0.92
C9orf47-202ENST00000375850 KRTAP10-12P60413 245 aa9.28□□□□□ -0.92
C9orf47-202ENST00000375850 KRTAP10-7P60409 375 aaPredicted RBP9.26□□□□□ -0.93
C9orf47-202ENST00000375850 LCE3BQ5TA77 95 aa9.26□□□□□ -0.93
C9orf47-202ENST00000375850 TRAV7A0A075B6U4 112 aa9.14□□□□□ -0.95
C9orf47-202ENST00000375850 MT-ATP8P03928 68 aa9.13□□□□□ -0.95
C9orf47-202ENST00000375850 SPTSSBQ8NFR3 76 aa9.06□□□□□ -0.96
C9orf47-202ENST00000375850 SCGB1A1P11684 91 aa9.03□□□□□ -0.96
C9orf47-202ENST00000375850 ACYP2P14621 99 aa9.03□□□□□ -0.96
C9orf47-202ENST00000375850 J3QR89 54 aa8.98□□□□□ -0.97
C9orf47-202ENST00000375850 CHKB-CPT1BH3BT56 60 aa8.85□□□□□ -0.99
C9orf47-202ENST00000375850 LCE5AQ5TCM9 118 aa8.78□□□□□ -1
C9orf47-202ENST00000375850 CAMK2N1Q7Z7J9 78 aa8.77□□□□□ -1.01
C9orf47-202ENST00000375850 GPR98Q8WXG9 6306 aa8.76□□□□□ -1.01
C9orf47-202ENST00000375850 K7ERU9 68 aa8.76□□□□□ -1.01
C9orf47-202ENST00000375850 SMIM20Q8N5G0 67 aa8.74□□□□□ -1.01
C9orf47-202ENST00000375850 KRTAP19-7Q3SYF9 63 aa8.71□□□□□ -1.02
C9orf47-202ENST00000375850 KRTAP19-3Q7Z4W3 81 aa8.71□□□□□ -1.02
C9orf47-202ENST00000375850 DSTQ03001 7570 aaKnown RBP8.7□□□□□ -1.02
C9orf47-202ENST00000375850 MT1EP04732 61 aa8.67□□□□□ -1.02
C9orf47-202ENST00000375850 KRTAP4-9Q9BYQ8 210 aa8.65□□□□□ -1.02
C9orf47-202ENST00000375850 KRTAP13-4Q3LI77 160 aa8.64□□□□□ -1.03
C9orf47-202ENST00000375850 SPANXA2-OT1Q8N9U9 137 aa8.55□□□□□ -1.04
C9orf47-202ENST00000375850 CYSTM1Q9H1C7 97 aa8.53□□□□□ -1.04
C9orf47-202ENST00000375850 MT1GP13640 62 aa8.49□□□□□ -1.05
C9orf47-202ENST00000375850 SNURFQ9Y675 71 aa8.48□□□□□ -1.05
C9orf47-202ENST00000375850 PP632Q6XCG6 107 aa8.46□□□□□ -1.06
C9orf47-202ENST00000375850 LCE1DQ5T752 114 aa8.45□□□□□ -1.06
C9orf47-202ENST00000375850 A0A0D9SG42 100 aa8.44□□□□□ -1.06
C9orf47-202ENST00000375850 LCE4AQ5TA78 99 aa8.42□□□□□ -1.06
C9orf47-202ENST00000375850 SEC61GP60059 68 aa8.38□□□□□ -1.07
C9orf47-202ENST00000375850 KRTAP19-5Q3LI72 72 aa8.37□□□□□ -1.07
C9orf47-202ENST00000375850 SERP1Q9Y6X1 66 aa8.36□□□□□ -1.07
C9orf47-202ENST00000375850 SPINT4Q6UDR6 99 aa8.3□□□□□ -1.08
C9orf47-202ENST00000375850 MT4P47944 62 aa8.28□□□□□ -1.08
C9orf47-202ENST00000375850 MT1MQ8N339 61 aa8.28□□□□□ -1.08
C9orf47-202ENST00000375850 SERP2Q8N6R1 65 aa8.28□□□□□ -1.08
C9orf47-202ENST00000375850 HMCN1Q96RW7 5635 aa8.28□□□□□ -1.08
C9orf47-202ENST00000375850 COA5Q86WW8 74 aa8.27□□□□□ -1.09
C9orf47-202ENST00000375850 SPATA8Q6RVD6 105 aa8.24□□□□□ -1.09
C9orf47-202ENST00000375850 MT1LQ93083 61 aa8.22□□□□□ -1.09
C9orf47-202ENST00000375850 A0A1B0GU33 70 aa8.21□□□□□ -1.1
C9orf47-202ENST00000375850 KRTAP12-1P59990 96 aa8.2□□□□□ -1.1
C9orf47-202ENST00000375850 KRTAP5-4Q6L8H1 288 aa8.15□□□□□ -1.1
C9orf47-202ENST00000375850 COX7CP15954 63 aa8.1□□□□□ -1.11
C9orf47-202ENST00000375850 AHNAK2Q8IVF2 5795 aa8.08□□□□□ -1.12
C9orf47-202ENST00000375850 KRTAP5-10Q6L8G5 202 aa8.06□□□□□ -1.12
C9orf47-202ENST00000375850 SMIM26A0A096LP01 95 aa8.04□□□□□ -1.12
C9orf47-202ENST00000375850 C10orf95Q9H7T3 257 aa8.03□□□□□ -1.12
C9orf47-202ENST00000375850 TNP1P09430 55 aa8□□□□□ -1.13
C9orf47-202ENST00000375850 KRTAP4-6Q9BYQ5 205 aa8□□□□□ -1.13
C9orf47-202ENST00000375850 KRTAP4-3Q9BYR4 195 aa8□□□□□ -1.13
C9orf47-202ENST00000375850 LCE3AQ5TA76 89 aa7.99□□□□□ -1.13
C9orf47-202ENST00000375850 ANAPC13Q9BS18 74 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms