RNA–Protein interactions for RNA: ENST00000374982.5

HLA-DRA-201, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

BASIC

Gene HLA-DRA, Length 1,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-201ENST00000374982 FAM236AA0A1B0GUQ0 79 aa4.35□□□□□ -1.71
HLA-DRA-201ENST00000374982 FAM236BA0A1B0GV22 79 aa4.35□□□□□ -1.71
HLA-DRA-201ENST00000374982 ATP5EP2Q5VTU8 51 aa4.35□□□□□ -1.71
HLA-DRA-201ENST00000374982 NREPQ16612 68 aa4.33□□□□□ -1.72
HLA-DRA-201ENST00000374982 H1FX-AS1Q4G0G2 97 aa4.32□□□□□ -1.72
HLA-DRA-201ENST00000374982 A0A087WSZ3 146 aa4.31□□□□□ -1.72
HLA-DRA-201ENST00000374982 MT-ATP8P03928 68 aa4.31□□□□□ -1.72
HLA-DRA-201ENST00000374982 ZCCHC13Q8WW36 166 aaKnown RBP4.31□□□□□ -1.72
HLA-DRA-201ENST00000374982 CXCL6P80162 114 aa4.3□□□□□ -1.72
HLA-DRA-201ENST00000374982 Q6ZVQ6 151 aa4.29□□□□□ -1.72
HLA-DRA-201ENST00000374982 AHNAK2Q8IVF2 5795 aa4.29□□□□□ -1.72
HLA-DRA-201ENST00000374982 KRTAP5-7Q6L8G8 165 aa4.28□□□□□ -1.72
HLA-DRA-201ENST00000374982 BPY2O14599 106 aa4.27□□□□□ -1.73
HLA-DRA-201ENST00000374982 IGKV3D-7A0A0C4DH55 119 aa4.26□□□□□ -1.73
HLA-DRA-201ENST00000374982 HIST1H4AP62805 103 aaKnown RBP4.26□□□□□ -1.73
HLA-DRA-201ENST00000374982 PCP4P48539 62 aa4.25□□□□□ -1.73
HLA-DRA-201ENST00000374982 HMCN1Q96RW7 5635 aa4.24□□□□□ -1.73
HLA-DRA-201ENST00000374982 J3KT08 172 aa4.24□□□□□ -1.73
HLA-DRA-201ENST00000374982 IGKV4-1P06312 121 aa4.24□□□□□ -1.73
HLA-DRA-201ENST00000374982 IGHV6-1A0A0B4J1U7 121 aa4.22□□□□□ -1.73
HLA-DRA-201ENST00000374982 SPRR5A0A1B0GTR4 108 aa4.22□□□□□ -1.73
HLA-DRA-201ENST00000374982 ATOX1O00244 68 aa4.22□□□□□ -1.73
HLA-DRA-201ENST00000374982 SMIM20Q8N5G0 67 aa4.22□□□□□ -1.73
HLA-DRA-201ENST00000374982 ANAPC13Q9BS18 74 aa4.22□□□□□ -1.73
HLA-DRA-201ENST00000374982 LINC00472Q9H8W2 130 aa4.22□□□□□ -1.73
HLA-DRA-201ENST00000374982 NDUFB1O75438 58 aa4.21□□□□□ -1.74
HLA-DRA-201ENST00000374982 C8orf87E5RJ46 101 aa4.19□□□□□ -1.74
HLA-DRA-201ENST00000374982 KRTAP12-2P59991 146 aa4.19□□□□□ -1.74
HLA-DRA-201ENST00000374982 A0A1B0GVX0 72 aa4.18□□□□□ -1.74
HLA-DRA-201ENST00000374982 MT1XP80297 61 aa4.18□□□□□ -1.74
HLA-DRA-201ENST00000374982 C5orf47Q569G3 176 aa4.18□□□□□ -1.74
HLA-DRA-201ENST00000374982 PRO2289Q9P1D8 64 aa4.18□□□□□ -1.74
HLA-DRA-201ENST00000374982 DEFB116Q30KQ4 102 aa4.17□□□□□ -1.74
HLA-DRA-201ENST00000374982 A0A087WVE0 104 aa4.16□□□□□ -1.74
HLA-DRA-201ENST00000374982 MT4P47944 62 aa4.16□□□□□ -1.74
HLA-DRA-201ENST00000374982 KLKP1Q107X0 134 aa4.16□□□□□ -1.74
HLA-DRA-201ENST00000374982 SERP2Q8N6R1 65 aa4.15□□□□□ -1.75
HLA-DRA-201ENST00000374982 TRAV7A0A075B6U4 112 aa4.14□□□□□ -1.75
HLA-DRA-201ENST00000374982 PRR15Q8IV56 129 aa4.14□□□□□ -1.75
HLA-DRA-201ENST00000374982 HCG22E2RYF7 251 aa4.13□□□□□ -1.75
HLA-DRA-201ENST00000374982 UQCRQO14949 82 aa4.13□□□□□ -1.75
HLA-DRA-201ENST00000374982 Q8N9L7 120 aa4.13□□□□□ -1.75
HLA-DRA-201ENST00000374982 K7EQZ3 153 aa4.12□□□□□ -1.75
HLA-DRA-201ENST00000374982 COX7CP15954 63 aa4.12□□□□□ -1.75
HLA-DRA-201ENST00000374982 CASC2Q6XLA1 102 aa4.11□□□□□ -1.75
HLA-DRA-201ENST00000374982 hDV103S1A0JD37 113 aa4.08□□□□□ -1.76
HLA-DRA-201ENST00000374982 TP53AIP1Q9HCN2 124 aa4.08□□□□□ -1.76
HLA-DRA-201ENST00000374982 C8orf17Q9NRJ1 99 aa4.08□□□□□ -1.76
HLA-DRA-201ENST00000374982 KRTAP15-1Q3LI76 137 aa4.07□□□□□ -1.76
HLA-DRA-201ENST00000374982 NDUFC1O43677 76 aa4.06□□□□□ -1.76
HLA-DRA-201ENST00000374982 MP68P56378 58 aa4.06□□□□□ -1.76
HLA-DRA-201ENST00000374982 LCA10Q71F78 164 aa4.06□□□□□ -1.76
HLA-DRA-201ENST00000374982 OCR1Q9BZK8 76 aa4.06□□□□□ -1.76
HLA-DRA-201ENST00000374982 CCDC179H3BU77 68 aa4.05□□□□□ -1.76
HLA-DRA-201ENST00000374982 TMEM254Q8TBM7 123 aa4.05□□□□□ -1.76
HLA-DRA-201ENST00000374982 MMP24-AS1A0A0U1RRL7 71 aa4.04□□□□□ -1.76
HLA-DRA-201ENST00000374982 H3BPC8 53 aa4.04□□□□□ -1.76
HLA-DRA-201ENST00000374982 C20orf197Q8N268 126 aa4.04□□□□□ -1.76
HLA-DRA-201ENST00000374982 MRPL34Q9BQ48 92 aaKnown RBP4.04□□□□□ -1.76
HLA-DRA-201ENST00000374982 CSAG1Q6PB30 78 aa4.03□□□□□ -1.76
HLA-DRA-201ENST00000374982 CRIPTQ9P021 101 aa4.03□□□□□ -1.76
HLA-DRA-201ENST00000374982 NDUFS5O43920 106 aa4.02□□□□□ -1.77
HLA-DRA-201ENST00000374982 KRTAP23-1A1A580 65 aa3.99□□□□□ -1.77
HLA-DRA-201ENST00000374982 KRTAP10-7P60409 375 aaPredicted RBP3.99□□□□□ -1.77
HLA-DRA-201ENST00000374982 S4R3F8 94 aa3.99□□□□□ -1.77
HLA-DRA-201ENST00000374982 TRAV22A0A0B4J277 110 aa3.98□□□□□ -1.77
HLA-DRA-201ENST00000374982 H0Y9P7 68 aa3.98□□□□□ -1.77
HLA-DRA-201ENST00000374982 TMEM258P61165 79 aa3.98□□□□□ -1.77
HLA-DRA-201ENST00000374982 C4orf26Q17RF5 130 aa3.97□□□□□ -1.77
HLA-DRA-201ENST00000374982 SNURFQ9Y675 71 aa3.97□□□□□ -1.77
HLA-DRA-201ENST00000374982 ATP5EP56381 51 aaPredicted RBP3.96□□□□□ -1.78
HLA-DRA-201ENST00000374982 C1orf64Q8NEQ6 169 aa3.96□□□□□ -1.78
HLA-DRA-201ENST00000374982 LINC00208Q96KT6 92 aa3.96□□□□□ -1.78
HLA-DRA-201ENST00000374982 IGKV2D-30A0A075B6S6 120 aa3.95□□□□□ -1.78
HLA-DRA-201ENST00000374982 LOC101927531A0A1B0GV80 90 aa3.95□□□□□ -1.78
HLA-DRA-201ENST00000374982 IGKV2-30P06310 120 aa3.95□□□□□ -1.78
HLA-DRA-201ENST00000374982 KRTAP10-12P60413 245 aa3.95□□□□□ -1.78
HLA-DRA-201ENST00000374982 C7orf65Q6ZTY9 151 aa3.95□□□□□ -1.78
HLA-DRA-201ENST00000374982 H7BZZ5 65 aa3.93□□□□□ -1.78
HLA-DRA-201ENST00000374982 PLAC4Q8WY50 150 aa3.92□□□□□ -1.78
HLA-DRA-201ENST00000374982 RPS28P62857 69 aaKnown RBP3.91□□□□□ -1.78
HLA-DRA-201ENST00000374982 Q5W150 140 aa3.91□□□□□ -1.78
HLA-DRA-201ENST00000374982 SPANXA2-OT1Q8N9U9 137 aa3.9□□□□□ -1.79
HLA-DRA-201ENST00000374982 KRTAP5-4Q6L8H1 288 aa3.88□□□□□ -1.79
HLA-DRA-201ENST00000374982 CYSTM1Q9H1C7 97 aa3.88□□□□□ -1.79
HLA-DRA-201ENST00000374982 CYP4F30PQ9H0H9 118 aa3.87□□□□□ -1.79
HLA-DRA-201ENST00000374982 SERP1Q9Y6X1 66 aa3.87□□□□□ -1.79
HLA-DRA-201ENST00000374982 A8MUN3 132 aa3.86□□□□□ -1.79
HLA-DRA-201ENST00000374982 KRTAP19-3Q7Z4W3 81 aa3.86□□□□□ -1.79
HLA-DRA-201ENST00000374982 ACYP2P14621 99 aa3.81□□□□□ -1.8
HLA-DRA-201ENST00000374982 SMIM26A0A096LP01 95 aa3.79□□□□□ -1.8
HLA-DRA-201ENST00000374982 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
HLA-DRA-201ENST00000374982 H0YAA0 97 aa3.75□□□□□ -1.81
HLA-DRA-201ENST00000374982 CHKB-CPT1BH3BT56 60 aa3.75□□□□□ -1.81
HLA-DRA-201ENST00000374982 MT1EP04732 61 aa3.75□□□□□ -1.81
HLA-DRA-201ENST00000374982 KRTAP19-7Q3SYF9 63 aa3.75□□□□□ -1.81
HLA-DRA-201ENST00000374982 DMAC1Q96GE9 116 aa3.75□□□□□ -1.81
HLA-DRA-201ENST00000374982 V9GYY9 64 aa3.75□□□□□ -1.81
HLA-DRA-201ENST00000374982 COA5Q86WW8 74 aa3.74□□□□□ -1.81
HLA-DRA-201ENST00000374982 SPTSSBQ8NFR3 76 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms