RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 COX6B2Q6YFQ2 88 aa8.14□□□□□ -1.11
TMEM50A-201ENST00000374358 KIAA1109Q2LD37 5005 aa8.13□□□□□ -1.11
TMEM50A-201ENST00000374358 KRTAP10-8P60410 259 aa8.13□□□□□ -1.11
TMEM50A-201ENST00000374358 RYR1P21817 5038 aa8.12□□□□□ -1.11
TMEM50A-201ENST00000374358 A0A1B0GU33 70 aa8.1□□□□□ -1.11
TMEM50A-201ENST00000374358 LPAP08519 4548 aa8.08□□□□□ -1.12
TMEM50A-201ENST00000374358 H1FX-AS1Q4G0G2 97 aa8.07□□□□□ -1.12
TMEM50A-201ENST00000374358 XP32Q5T750 250 aa8.05□□□□□ -1.12
TMEM50A-201ENST00000374358 RPL37P61927 97 aaKnown RBP8.03□□□□□ -1.12
TMEM50A-201ENST00000374358 CSAG1Q6PB30 78 aa8.01□□□□□ -1.13
TMEM50A-201ENST00000374358 KRTAP3-3Q9BYR6 98 aa8□□□□□ -1.13
TMEM50A-201ENST00000374358 LRP2P98164 4655 aa7.97□□□□□ -1.13
TMEM50A-201ENST00000374358 EPPK1P58107 5090 aaKnown RBP7.95□□□□□ -1.14
TMEM50A-201ENST00000374358 MT1HL1P0DM35 61 aa7.95□□□□□ -1.14
TMEM50A-201ENST00000374358 KRTAP10-6P60371 365 aaPredicted RBP7.91□□□□□ -1.14
TMEM50A-201ENST00000374358 KRTAP13-4Q3LI77 160 aa7.89□□□□□ -1.15
TMEM50A-201ENST00000374358 ABCA13Q86UQ4 5058 aa7.88□□□□□ -1.15
TMEM50A-201ENST00000374358 S4R3F8 94 aa7.88□□□□□ -1.15
TMEM50A-201ENST00000374358 KRTAP3-2Q9BYR7 98 aa7.85□□□□□ -1.15
TMEM50A-201ENST00000374358 A0A0D9SG42 100 aa7.85□□□□□ -1.15
TMEM50A-201ENST00000374358 CRIPTQ9P021 101 aa7.84□□□□□ -1.16
TMEM50A-201ENST00000374358 P0C880 135 aa7.82□□□□□ -1.16
TMEM50A-201ENST00000374358 K7ERS5 55 aa7.75□□□□□ -1.17
TMEM50A-201ENST00000374358 KRTAP4-5Q9BYR2 181 aa7.74□□□□□ -1.17
TMEM50A-201ENST00000374358 KRTAP25-1Q3LHN0 102 aa7.73□□□□□ -1.17
TMEM50A-201ENST00000374358 TPRXLQ17RH7 258 aa7.67□□□□□ -1.18
TMEM50A-201ENST00000374358 BIRC6Q9NR09 4857 aa7.67□□□□□ -1.18
TMEM50A-201ENST00000374358 ROMO1P60602 79 aa7.63□□□□□ -1.19
TMEM50A-201ENST00000374358 KRTAP12-2P59991 146 aa7.61□□□□□ -1.19
TMEM50A-201ENST00000374358 SPINT4Q6UDR6 99 aa7.55□□□□□ -1.2
TMEM50A-201ENST00000374358 C10orf95Q9H7T3 257 aa7.53□□□□□ -1.2
TMEM50A-201ENST00000374358 MUC17Q685J3 4493 aa7.52□□□□□ -1.21
TMEM50A-201ENST00000374358 KRTAP12-1P59990 96 aa7.51□□□□□ -1.21
TMEM50A-201ENST00000374358 HERC2O95714 4834 aa7.47□□□□□ -1.21
TMEM50A-201ENST00000374358 MUC2Q02817 5179 aa7.47□□□□□ -1.21
TMEM50A-201ENST00000374358 KRTAP4-1Q9BYQ7 146 aa7.46□□□□□ -1.22
TMEM50A-201ENST00000374358 PCLOQ9Y6V0 5065 aa7.39□□□□□ -1.23
TMEM50A-201ENST00000374358 M0QZ58 72 aa7.39□□□□□ -1.23
TMEM50A-201ENST00000374358 LORP23490 312 aaPredicted RBP7.37□□□□□ -1.23
TMEM50A-201ENST00000374358 SEC61BP60468 96 aaKnown RBP7.36□□□□□ -1.23
TMEM50A-201ENST00000374358 J3QL48 77 aa7.36□□□□□ -1.23
TMEM50A-201ENST00000374358 R4GN34 69 aa7.34□□□□□ -1.24
TMEM50A-201ENST00000374358 KRTAP19-2Q3LHN2 52 aa7.25□□□□□ -1.25
TMEM50A-201ENST00000374358 HERC1Q15751 4861 aa7.22□□□□□ -1.25
TMEM50A-201ENST00000374358 NDUFAF8A1L188 74 aa7.2□□□□□ -1.26
TMEM50A-201ENST00000374358 FLGP20930 4061 aaPredicted RBP7.12□□□□□ -1.27
TMEM50A-201ENST00000374358 FAT4Q6V0I7 4981 aa7.09□□□□□ -1.27
TMEM50A-201ENST00000374358 KRTAP15-1Q3LI76 137 aa7.05□□□□□ -1.28
TMEM50A-201ENST00000374358 HMCN2Q8NDA2 5059 aa7.03□□□□□ -1.28
TMEM50A-201ENST00000374358 CAMK2N1Q7Z7J9 78 aa6.96□□□□□ -1.29
TMEM50A-201ENST00000374358 RNF213Q63HN8 5207 aa6.92□□□□□ -1.3
TMEM50A-201ENST00000374358 UBR4Q5T4S7 5183 aa6.86□□□□□ -1.31
TMEM50A-201ENST00000374358 A0A0A0MQY5 61 aa6.85□□□□□ -1.31
TMEM50A-201ENST00000374358 LCE2CQ5TA81 110 aa6.84□□□□□ -1.31
TMEM50A-201ENST00000374358 PLAC4Q8WY50 150 aa6.77□□□□□ -1.33
TMEM50A-201ENST00000374358 M0R2T5 61 aa6.71□□□□□ -1.34
TMEM50A-201ENST00000374358 PP632Q6XCG6 107 aa6.66□□□□□ -1.34
TMEM50A-201ENST00000374358 KRTAP19-1Q8IUB9 90 aa6.66□□□□□ -1.34
TMEM50A-201ENST00000374358 MT1HP80294 61 aa6.65□□□□□ -1.35
TMEM50A-201ENST00000374358 LUZP6Q538Z0 58 aa6.65□□□□□ -1.35
TMEM50A-201ENST00000374358 TNP1P09430 55 aa6.64□□□□□ -1.35
TMEM50A-201ENST00000374358 SPRR2GQ9BYE4 73 aa6.62□□□□□ -1.35
TMEM50A-201ENST00000374358 MT1FP04733 61 aa6.58□□□□□ -1.36
TMEM50A-201ENST00000374358 MT2AP02795 61 aa6.54□□□□□ -1.36
TMEM50A-201ENST00000374358 KRTAP10-10P60014 251 aa6.54□□□□□ -1.36
TMEM50A-201ENST00000374358 KRTAP9-8Q9BYQ0 159 aa6.49□□□□□ -1.37
TMEM50A-201ENST00000374358 KRTAP23-1A1A580 65 aa6.39□□□□□ -1.39
TMEM50A-201ENST00000374358 LCE3AQ5TA76 89 aa6.39□□□□□ -1.39
TMEM50A-201ENST00000374358 MT1BP07438 61 aa6.32□□□□□ -1.4
TMEM50A-201ENST00000374358 KRTAP19-8Q3LI54 63 aa6.31□□□□□ -1.4
TMEM50A-201ENST00000374358 KRTAP10-5P60370 271 aa6.28□□□□□ -1.4
TMEM50A-201ENST00000374358 MT1XP80297 61 aa6.27□□□□□ -1.41
TMEM50A-201ENST00000374358 SPRR5A0A1B0GTR4 108 aa6.26□□□□□ -1.41
TMEM50A-201ENST00000374358 KRTAP9-3Q9BYQ3 159 aa6.2□□□□□ -1.42
TMEM50A-201ENST00000374358 USH2AO75445 5202 aa6.2□□□□□ -1.42
TMEM50A-201ENST00000374358 KRTAP10-7P60409 375 aaPredicted RBP6.14□□□□□ -1.43
TMEM50A-201ENST00000374358 KRTAP8-1Q8IUC2 63 aa6.13□□□□□ -1.43
TMEM50A-201ENST00000374358 KRTAP10-12P60413 245 aa6.12□□□□□ -1.43
TMEM50A-201ENST00000374358 KMT2DO14686 5537 aa6.08□□□□□ -1.44
TMEM50A-201ENST00000374358 KRTAP12-3P60328 96 aa6.04□□□□□ -1.44
TMEM50A-201ENST00000374358 LCE2BO14633 110 aa6.02□□□□□ -1.45
TMEM50A-201ENST00000374358 PRO2289Q9P1D8 64 aa5.92□□□□□ -1.46
TMEM50A-201ENST00000374358 LCE2AQ5TA79 106 aaPredicted RBP5.86□□□□□ -1.47
TMEM50A-201ENST00000374358 KRTAP19-5Q3LI72 72 aa5.85□□□□□ -1.47
TMEM50A-201ENST00000374358 LCE2DQ5TA82 110 aaPredicted RBP5.84□□□□□ -1.47
TMEM50A-201ENST00000374358 KRTAP4-8A0A0G2JLE6 195 aa5.82□□□□□ -1.48
TMEM50A-201ENST00000374358 KRTAP4-8Q9BYQ9 185 aa5.82□□□□□ -1.48
TMEM50A-201ENST00000374358 KRTAP9-2Q9BYQ4 174 aa5.74□□□□□ -1.49
TMEM50A-201ENST00000374358 FSIP2Q5CZC0 6907 aa5.73□□□□□ -1.49
TMEM50A-201ENST00000374358 LCE3CQ5T5A8 94 aa5.67□□□□□ -1.5
TMEM50A-201ENST00000374358 SSPOA2VEC9 5147 aa5.6□□□□□ -1.51
TMEM50A-201ENST00000374358 KRTAP19-7Q3SYF9 63 aa5.59□□□□□ -1.51
TMEM50A-201ENST00000374358 KRTAP4-7Q9BYR0 210 aa5.59□□□□□ -1.52
TMEM50A-201ENST00000374358 KRTAP9-6A8MVA2 160 aa5.57□□□□□ -1.52
TMEM50A-201ENST00000374358 INE1O15225 51 aa5.56□□□□□ -1.52
TMEM50A-201ENST00000374358 KRTAP9-6A0A140TA67 174 aa5.51□□□□□ -1.53
TMEM50A-201ENST00000374358 MT1EP04732 61 aa5.41□□□□□ -1.54
TMEM50A-201ENST00000374358 MT1LQ93083 61 aa5.41□□□□□ -1.54
TMEM50A-201ENST00000374358 CRCT1Q9UGL9 99 aa5.4□□□□□ -1.54
TMEM50A-201ENST00000374358 FCGBPQ9Y6R7 5405 aaPredicted RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms