RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 ALMS1Q8TCU4 4167 aa6.08□□□□□ -1.44
PACSIN1-202ENST00000374043 M0QZ58 72 aa6.07□□□□□ -1.44
PACSIN1-202ENST00000374043 KIAA1109Q2LD37 5005 aa6.06□□□□□ -1.44
PACSIN1-202ENST00000374043 LRP1Q07954 4544 aaKnown RBP6.04□□□□□ -1.44
PACSIN1-202ENST00000374043 SACSQ9NZJ4 4579 aa6.04□□□□□ -1.44
PACSIN1-202ENST00000374043 P0C880 135 aa6.04□□□□□ -1.44
PACSIN1-202ENST00000374043 KRTAP4-5Q9BYR2 181 aa6□□□□□ -1.45
PACSIN1-202ENST00000374043 APOBP04114 4563 aaKnown RBP6□□□□□ -1.45
PACSIN1-202ENST00000374043 KMT2CQ8NEZ4 4911 aaKnown RBP6□□□□□ -1.45
PACSIN1-202ENST00000374043 M0R2T5 61 aa6□□□□□ -1.45
PACSIN1-202ENST00000374043 RYR1P21817 5038 aa5.99□□□□□ -1.45
PACSIN1-202ENST00000374043 H3BS24 57 aa5.99□□□□□ -1.45
PACSIN1-202ENST00000374043 FAT3Q8TDW7 4589 aa5.98□□□□□ -1.45
PACSIN1-202ENST00000374043 ROMO1P60602 79 aa5.98□□□□□ -1.45
PACSIN1-202ENST00000374043 CAMK2N1Q7Z7J9 78 aa5.97□□□□□ -1.45
PACSIN1-202ENST00000374043 FAT2Q9NYQ8 4349 aa5.96□□□□□ -1.46
PACSIN1-202ENST00000374043 MT1HL1P0DM35 61 aa5.96□□□□□ -1.46
PACSIN1-202ENST00000374043 RYR3Q15413 4870 aa5.95□□□□□ -1.46
PACSIN1-202ENST00000374043 TPRXLQ17RH7 258 aa5.93□□□□□ -1.46
PACSIN1-202ENST00000374043 C10orf95Q9H7T3 257 aa5.91□□□□□ -1.46
PACSIN1-202ENST00000374043 KRTAP25-1Q3LHN0 102 aa5.88□□□□□ -1.47
PACSIN1-202ENST00000374043 RYR2Q92736 4967 aa5.87□□□□□ -1.47
PACSIN1-202ENST00000374043 PKD1P98161 4303 aa5.87□□□□□ -1.47
PACSIN1-202ENST00000374043 KRTAP17-1Q9BYP8 105 aa5.86□□□□□ -1.47
PACSIN1-202ENST00000374043 KRTAP13-4Q3LI77 160 aa5.85□□□□□ -1.47
PACSIN1-202ENST00000374043 KRTAP10-6P60371 365 aaPredicted RBP5.81□□□□□ -1.48
PACSIN1-202ENST00000374043 KRTAP3-3Q9BYR6 98 aa5.8□□□□□ -1.48
PACSIN1-202ENST00000374043 KRTAP12-2P59991 146 aa5.76□□□□□ -1.49
PACSIN1-202ENST00000374043 KRTAP3-2Q9BYR7 98 aa5.71□□□□□ -1.5
PACSIN1-202ENST00000374043 LRP2P98164 4655 aa5.7□□□□□ -1.5
PACSIN1-202ENST00000374043 HSPG2P98160 4391 aa5.69□□□□□ -1.5
PACSIN1-202ENST00000374043 LUZP6Q538Z0 58 aa5.66□□□□□ -1.5
PACSIN1-202ENST00000374043 KRTAP12-1P59990 96 aa5.65□□□□□ -1.51
PACSIN1-202ENST00000374043 EPPK1P58107 5090 aaKnown RBP5.62□□□□□ -1.51
PACSIN1-202ENST00000374043 LPAP08519 4548 aa5.59□□□□□ -1.51
PACSIN1-202ENST00000374043 HERC2O95714 4834 aa5.57□□□□□ -1.52
PACSIN1-202ENST00000374043 PLAC4Q8WY50 150 aa5.56□□□□□ -1.52
PACSIN1-202ENST00000374043 PKHD1L1Q86WI1 4243 aa5.55□□□□□ -1.52
PACSIN1-202ENST00000374043 KRTAP4-1Q9BYQ7 146 aa5.55□□□□□ -1.52
PACSIN1-202ENST00000374043 LORP23490 312 aaPredicted RBP5.54□□□□□ -1.52
PACSIN1-202ENST00000374043 NDUFAF8A1L188 74 aa5.52□□□□□ -1.53
PACSIN1-202ENST00000374043 KRTAP10-10P60014 251 aa5.49□□□□□ -1.53
PACSIN1-202ENST00000374043 TNXBP22105 4242 aa5.46□□□□□ -1.54
PACSIN1-202ENST00000374043 ABCA13Q86UQ4 5058 aa5.44□□□□□ -1.54
PACSIN1-202ENST00000374043 TNP1P09430 55 aa5.43□□□□□ -1.54
PACSIN1-202ENST00000374043 MUC2Q02817 5179 aa5.37□□□□□ -1.55
PACSIN1-202ENST00000374043 A0A0A0MQY5 61 aa5.34□□□□□ -1.55
PACSIN1-202ENST00000374043 HERC1Q15751 4861 aa5.27□□□□□ -1.57
PACSIN1-202ENST00000374043 BIRC6Q9NR09 4857 aa5.22□□□□□ -1.57
PACSIN1-202ENST00000374043 RNF213Q63HN8 5207 aa5.21□□□□□ -1.58
PACSIN1-202ENST00000374043 PP632Q6XCG6 107 aa5.21□□□□□ -1.58
PACSIN1-202ENST00000374043 FAT4Q6V0I7 4981 aa5.16□□□□□ -1.58
PACSIN1-202ENST00000374043 PCLOQ9Y6V0 5065 aa5.12□□□□□ -1.59
PACSIN1-202ENST00000374043 KRTAP15-1Q3LI76 137 aa5.08□□□□□ -1.6
PACSIN1-202ENST00000374043 UBR4Q5T4S7 5183 aa5.07□□□□□ -1.6
PACSIN1-202ENST00000374043 MT1HP80294 61 aa5.05□□□□□ -1.6
PACSIN1-202ENST00000374043 LCE2DQ5TA82 110 aaPredicted RBP5.01□□□□□ -1.61
PACSIN1-202ENST00000374043 MT1FP04733 61 aa4.98□□□□□ -1.61
PACSIN1-202ENST00000374043 MT2AP02795 61 aa4.97□□□□□ -1.61
PACSIN1-202ENST00000374043 KRTAP19-2Q3LHN2 52 aa4.96□□□□□ -1.62
PACSIN1-202ENST00000374043 PRO2289Q9P1D8 64 aa4.95□□□□□ -1.62
PACSIN1-202ENST00000374043 MUC17Q685J3 4493 aa4.94□□□□□ -1.62
PACSIN1-202ENST00000374043 LCE3AQ5TA76 89 aa4.93□□□□□ -1.62
PACSIN1-202ENST00000374043 LCE2CQ5TA81 110 aa4.92□□□□□ -1.62
PACSIN1-202ENST00000374043 HMCN2Q8NDA2 5059 aa4.92□□□□□ -1.62
PACSIN1-202ENST00000374043 FLGP20930 4061 aaPredicted RBP4.9□□□□□ -1.63
PACSIN1-202ENST00000374043 KRTAP19-1Q8IUB9 90 aa4.88□□□□□ -1.63
PACSIN1-202ENST00000374043 SPRR2GQ9BYE4 73 aa4.86□□□□□ -1.63
PACSIN1-202ENST00000374043 FSIP2Q5CZC0 6907 aa4.85□□□□□ -1.63
PACSIN1-202ENST00000374043 KRTAP10-12P60413 245 aa4.84□□□□□ -1.64
PACSIN1-202ENST00000374043 KRTAP9-8Q9BYQ0 159 aa4.76□□□□□ -1.65
PACSIN1-202ENST00000374043 KRTAP12-3P60328 96 aa4.75□□□□□ -1.65
PACSIN1-202ENST00000374043 MT1BP07438 61 aa4.65□□□□□ -1.67
PACSIN1-202ENST00000374043 KRTAP10-7P60409 375 aaPredicted RBP4.64□□□□□ -1.67
PACSIN1-202ENST00000374043 USH2AO75445 5202 aa4.62□□□□□ -1.67
PACSIN1-202ENST00000374043 KRTAP23-1A1A580 65 aa4.62□□□□□ -1.67
PACSIN1-202ENST00000374043 MT1XP80297 61 aa4.61□□□□□ -1.67
PACSIN1-202ENST00000374043 KRTAP10-5P60370 271 aa4.59□□□□□ -1.67
PACSIN1-202ENST00000374043 KRTAP19-8Q3LI54 63 aa4.59□□□□□ -1.68
PACSIN1-202ENST00000374043 LCE2BO14633 110 aa4.56□□□□□ -1.68
PACSIN1-202ENST00000374043 KRTAP9-3Q9BYQ3 159 aa4.56□□□□□ -1.68
PACSIN1-202ENST00000374043 CRCT1Q9UGL9 99 aa4.53□□□□□ -1.68
PACSIN1-202ENST00000374043 KRTAP19-5Q3LI72 72 aa4.51□□□□□ -1.69
PACSIN1-202ENST00000374043 KRTAP4-8A0A0G2JLE6 195 aa4.51□□□□□ -1.69
PACSIN1-202ENST00000374043 KRTAP4-8Q9BYQ9 185 aa4.51□□□□□ -1.69
PACSIN1-202ENST00000374043 KRTAP8-1Q8IUC2 63 aa4.5□□□□□ -1.69
PACSIN1-202ENST00000374043 KMT2DO14686 5537 aa4.46□□□□□ -1.7
PACSIN1-202ENST00000374043 LCE3CQ5T5A8 94 aa4.3□□□□□ -1.72
PACSIN1-202ENST00000374043 KRTAP4-7Q9BYR0 210 aa4.29□□□□□ -1.72
PACSIN1-202ENST00000374043 SPRR5A0A1B0GTR4 108 aa4.27□□□□□ -1.73
PACSIN1-202ENST00000374043 LCE2AQ5TA79 106 aaPredicted RBP4.26□□□□□ -1.73
PACSIN1-202ENST00000374043 DSTQ03001 7570 aaKnown RBP4.25□□□□□ -1.73
PACSIN1-202ENST00000374043 OBSCNQ5VST9 7968 aa4.22□□□□□ -1.73
PACSIN1-202ENST00000374043 SYNE1Q8NF91 8797 aaKnown RBP4.19□□□□□ -1.74
PACSIN1-202ENST00000374043 SPRR2FQ96RM1 72 aa4.18□□□□□ -1.74
PACSIN1-202ENST00000374043 FCGBPQ9Y6R7 5405 aaPredicted RBP4.14□□□□□ -1.75
PACSIN1-202ENST00000374043 INE1O15225 51 aa4.11□□□□□ -1.75
PACSIN1-202ENST00000374043 MT1GP13640 62 aa4.07□□□□□ -1.76
PACSIN1-202ENST00000374043 MUC12Q9UKN1 5478 aa4.06□□□□□ -1.76
PACSIN1-202ENST00000374043 SSPOA2VEC9 5147 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms