RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 MP68P56378 58 aa9.63□□□□□ -0.87
TMEM54-202ENST00000373463 MT-ATP8P03928 68 aa9.59□□□□□ -0.87
TMEM54-202ENST00000373463 SPRR2GQ9BYE4 73 aa9.58□□□□□ -0.88
TMEM54-202ENST00000373463 A8MUN3 132 aa9.56□□□□□ -0.88
TMEM54-202ENST00000373463 H3BPC8 53 aa9.54□□□□□ -0.88
TMEM54-202ENST00000373463 K7ERU9 68 aa9.54□□□□□ -0.88
TMEM54-202ENST00000373463 MT1BP07438 61 aa9.54□□□□□ -0.88
TMEM54-202ENST00000373463 SCGB1A1P11684 91 aa9.54□□□□□ -0.88
TMEM54-202ENST00000373463 IMUPQ9GZP8 106 aa9.54□□□□□ -0.88
TMEM54-202ENST00000373463 NDUFC1O43677 76 aa9.51□□□□□ -0.89
TMEM54-202ENST00000373463 KRTAP19-8Q3LI54 63 aa9.51□□□□□ -0.89
TMEM54-202ENST00000373463 KRTAP9-7A8MTY7 169 aa9.49□□□□□ -0.89
TMEM54-202ENST00000373463 H0YAA0 97 aa9.45□□□□□ -0.9
TMEM54-202ENST00000373463 Q5VV11 94 aa9.42□□□□□ -0.9
TMEM54-202ENST00000373463 DMAC1Q96GE9 116 aa9.42□□□□□ -0.9
TMEM54-202ENST00000373463 CRIPTQ9P021 101 aa9.38□□□□□ -0.91
TMEM54-202ENST00000373463 TRAV7A0A075B6U4 112 aa9.37□□□□□ -0.91
TMEM54-202ENST00000373463 ADM2Q7Z4H4 148 aa9.34□□□□□ -0.91
TMEM54-202ENST00000373463 MACF1Q9UPN3 7388 aaKnown RBP9.33□□□□□ -0.92
TMEM54-202ENST00000373463 SMIM20Q8N5G0 67 aa9.32□□□□□ -0.92
TMEM54-202ENST00000373463 A6NN06 94 aa9.24□□□□□ -0.93
TMEM54-202ENST00000373463 KRTAP10-5P60370 271 aa9.24□□□□□ -0.93
TMEM54-202ENST00000373463 P0C880 135 aa9.22□□□□□ -0.93
TMEM54-202ENST00000373463 KRTAP3-2Q9BYR7 98 aa9.2□□□□□ -0.94
TMEM54-202ENST00000373463 SNURFQ9Y675 71 aa9.2□□□□□ -0.94
TMEM54-202ENST00000373463 SYNE2Q8WXH0 6885 aaKnown RBP9.17□□□□□ -0.94
TMEM54-202ENST00000373463 ACYP2P14621 99 aa9.15□□□□□ -0.94
TMEM54-202ENST00000373463 SERP2Q8N6R1 65 aa9.11□□□□□ -0.95
TMEM54-202ENST00000373463 KRTAP6-3Q3LI67 103 aa9.09□□□□□ -0.95
TMEM54-202ENST00000373463 C20orf197Q8N268 126 aa9.09□□□□□ -0.95
TMEM54-202ENST00000373463 R4GN34 69 aa9.05□□□□□ -0.96
TMEM54-202ENST00000373463 SPANXA2-OT1Q8N9U9 137 aa9.02□□□□□ -0.97
TMEM54-202ENST00000373463 M0QZ58 72 aa9.01□□□□□ -0.97
TMEM54-202ENST00000373463 MT1XP80297 61 aa8.97□□□□□ -0.97
TMEM54-202ENST00000373463 CHKB-CPT1BH3BT56 60 aa8.94□□□□□ -0.98
TMEM54-202ENST00000373463 SPTSSBQ8NFR3 76 aa8.94□□□□□ -0.98
TMEM54-202ENST00000373463 PLAC4Q8WY50 150 aa8.9□□□□□ -0.98
TMEM54-202ENST00000373463 COX7CP15954 63 aa8.87□□□□□ -0.99
TMEM54-202ENST00000373463 LINC01554Q52M75 96 aa8.87□□□□□ -0.99
TMEM54-202ENST00000373463 CYSTM1Q9H1C7 97 aa8.83□□□□□ -1
TMEM54-202ENST00000373463 PRO2289Q9P1D8 64 aa8.82□□□□□ -1
TMEM54-202ENST00000373463 COA5Q86WW8 74 aa8.78□□□□□ -1
TMEM54-202ENST00000373463 KRTAP5-9P26371 169 aa8.77□□□□□ -1.01
TMEM54-202ENST00000373463 H7BZZ5 65 aa8.75□□□□□ -1.01
TMEM54-202ENST00000373463 KRTAP13-4Q3LI77 160 aa8.71□□□□□ -1.02
TMEM54-202ENST00000373463 KRTAP12-2P59991 146 aa8.67□□□□□ -1.02
TMEM54-202ENST00000373463 MUC12Q9UKN1 5478 aa8.64□□□□□ -1.03
TMEM54-202ENST00000373463 KMT2DO14686 5537 aa8.63□□□□□ -1.03
TMEM54-202ENST00000373463 NEBP20929 6669 aa8.61□□□□□ -1.03
TMEM54-202ENST00000373463 ANAPC13Q9BS18 74 aa8.6□□□□□ -1.03
TMEM54-202ENST00000373463 KRTAP10-7P60409 375 aaPredicted RBP8.56□□□□□ -1.04
TMEM54-202ENST00000373463 KRTAP4-8A0A0G2JLE6 195 aa8.54□□□□□ -1.04
TMEM54-202ENST00000373463 KRTAP4-8Q9BYQ9 185 aa8.54□□□□□ -1.04
TMEM54-202ENST00000373463 CCDC179H3BU77 68 aa8.51□□□□□ -1.05
TMEM54-202ENST00000373463 KRTAP8-1Q8IUC2 63 aa8.51□□□□□ -1.05
TMEM54-202ENST00000373463 KRTAP10-12P60413 245 aa8.5□□□□□ -1.05
TMEM54-202ENST00000373463 SPRR2FQ96RM1 72 aa8.5□□□□□ -1.05
TMEM54-202ENST00000373463 SERP1Q9Y6X1 66 aa8.45□□□□□ -1.06
TMEM54-202ENST00000373463 MDN1Q9NU22 5596 aa8.44□□□□□ -1.06
TMEM54-202ENST00000373463 SEC61GP60059 68 aa8.44□□□□□ -1.06
TMEM54-202ENST00000373463 SPATA8Q6RVD6 105 aa8.41□□□□□ -1.06
TMEM54-202ENST00000373463 A0A1B0GU33 70 aa8.38□□□□□ -1.07
TMEM54-202ENST00000373463 A0A0D9SG42 100 aa8.36□□□□□ -1.07
TMEM54-202ENST00000373463 SPRR2EP22531 72 aa8.34□□□□□ -1.07
TMEM54-202ENST00000373463 SPRR2BP35325 72 aa8.34□□□□□ -1.07
TMEM54-202ENST00000373463 SPRR2AP35326 72 aa8.34□□□□□ -1.07
TMEM54-202ENST00000373463 CAMK2N1Q7Z7J9 78 aa8.32□□□□□ -1.08
TMEM54-202ENST00000373463 KRTAP20-1Q3LI63 56 aa8.31□□□□□ -1.08
TMEM54-202ENST00000373463 LCE1AQ5T7P2 110 aa8.31□□□□□ -1.08
TMEM54-202ENST00000373463 A0A1B0GU69 56 aa8.27□□□□□ -1.09
TMEM54-202ENST00000373463 KRTAP12-1P59990 96 aa8.26□□□□□ -1.09
TMEM54-202ENST00000373463 ATP5EP56381 51 aaPredicted RBP8.25□□□□□ -1.09
TMEM54-202ENST00000373463 SPINT4Q6UDR6 99 aa8.2□□□□□ -1.1
TMEM54-202ENST00000373463 A8MU10 97 aa8.15□□□□□ -1.1
TMEM54-202ENST00000373463 KRTAP2-3P0C7H8 128 aa8.14□□□□□ -1.11
TMEM54-202ENST00000373463 KRTAP2-4Q9BYR9 128 aa8.14□□□□□ -1.11
TMEM54-202ENST00000373463 TMEM258P61165 79 aa8.12□□□□□ -1.11
TMEM54-202ENST00000373463 SMIM26A0A096LP01 95 aa8.1□□□□□ -1.11
TMEM54-202ENST00000373463 LINC01558Q9Y6Z2 57 aa8.08□□□□□ -1.12
TMEM54-202ENST00000373463 SPRR2DP22532 72 aa8.05□□□□□ -1.12
TMEM54-202ENST00000373463 KRTAP19-7Q3SYF9 63 aa8.03□□□□□ -1.12
TMEM54-202ENST00000373463 PRR15LQ9BU68 103 aa8□□□□□ -1.13
TMEM54-202ENST00000373463 MT1EP04732 61 aa7.92□□□□□ -1.14
TMEM54-202ENST00000373463 C10orf95Q9H7T3 257 aa7.9□□□□□ -1.14
TMEM54-202ENST00000373463 KRTAP2-2Q9BYT5 123 aa7.88□□□□□ -1.15
TMEM54-202ENST00000373463 KRTAP2-1Q9BYU5 128 aa7.88□□□□□ -1.15
TMEM54-202ENST00000373463 KRTAP19-5Q3LI72 72 aa7.83□□□□□ -1.16
TMEM54-202ENST00000373463 LCE3BQ5TA77 95 aa7.83□□□□□ -1.16
TMEM54-202ENST00000373463 LCE5AQ5TCM9 118 aa7.82□□□□□ -1.16
TMEM54-202ENST00000373463 UQCR11O14957 56 aa7.79□□□□□ -1.16
TMEM54-202ENST00000373463 KRTAP19-3Q7Z4W3 81 aa7.79□□□□□ -1.16
TMEM54-202ENST00000373463 TNP1P09430 55 aa7.73□□□□□ -1.17
TMEM54-202ENST00000373463 LCE3AQ5TA76 89 aa7.73□□□□□ -1.17
TMEM54-202ENST00000373463 MIR22HGQ0VDD5 57 aa7.65□□□□□ -1.18
TMEM54-202ENST00000373463 PSPHP1O15172 72 aa7.63□□□□□ -1.19
TMEM54-202ENST00000373463 Q1T7F1 81 aa7.63□□□□□ -1.19
TMEM54-202ENST00000373463 MT1GP13640 62 aa7.6□□□□□ -1.19
TMEM54-202ENST00000373463 MT1LQ93083 61 aa7.6□□□□□ -1.19
TMEM54-202ENST00000373463 V9GYY9 64 aa7.59□□□□□ -1.19
TMEM54-202ENST00000373463 DSTQ03001 7570 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms