RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 PKD1P98161 4303 aa6.98□□□□□ -1.29
NCDN-203ENST00000373253 RYR1P21817 5038 aa6.98□□□□□ -1.29
NCDN-203ENST00000373253 XP32Q5T750 250 aa6.96□□□□□ -1.3
NCDN-203ENST00000373253 KRTAP10-8P60410 259 aa6.93□□□□□ -1.3
NCDN-203ENST00000373253 S4R3F8 94 aa6.91□□□□□ -1.3
NCDN-203ENST00000373253 RPL37P61927 97 aaKnown RBP6.91□□□□□ -1.3
NCDN-203ENST00000373253 KRTAP4-5Q9BYR2 181 aa6.91□□□□□ -1.3
NCDN-203ENST00000373253 RYR2Q92736 4967 aa6.9□□□□□ -1.3
NCDN-203ENST00000373253 SPINT4Q6UDR6 99 aa6.9□□□□□ -1.31
NCDN-203ENST00000373253 KRTAP3-1Q9BYR8 98 aa6.9□□□□□ -1.31
NCDN-203ENST00000373253 KRTAP17-1Q9BYP8 105 aa6.87□□□□□ -1.31
NCDN-203ENST00000373253 ROMO1P60602 79 aa6.86□□□□□ -1.31
NCDN-203ENST00000373253 KRTAP25-1Q3LHN0 102 aa6.86□□□□□ -1.31
NCDN-203ENST00000373253 H1FX-AS1Q4G0G2 97 aa6.83□□□□□ -1.32
NCDN-203ENST00000373253 H0YAA0 97 aa6.79□□□□□ -1.32
NCDN-203ENST00000373253 A0A0A0MQY5 61 aa6.79□□□□□ -1.32
NCDN-203ENST00000373253 MT1HL1P0DM35 61 aa6.77□□□□□ -1.33
NCDN-203ENST00000373253 P0C880 135 aa6.72□□□□□ -1.33
NCDN-203ENST00000373253 EPPK1P58107 5090 aaKnown RBP6.71□□□□□ -1.33
NCDN-203ENST00000373253 LRP2P98164 4655 aa6.71□□□□□ -1.34
NCDN-203ENST00000373253 HSPG2P98160 4391 aa6.68□□□□□ -1.34
NCDN-203ENST00000373253 SEC61BP60468 96 aaKnown RBP6.68□□□□□ -1.34
NCDN-203ENST00000373253 NDUFAF8A1L188 74 aa6.66□□□□□ -1.34
NCDN-203ENST00000373253 M0QZ58 72 aa6.64□□□□□ -1.35
NCDN-203ENST00000373253 C10orf95Q9H7T3 257 aa6.64□□□□□ -1.35
NCDN-203ENST00000373253 R4GN34 69 aa6.64□□□□□ -1.35
NCDN-203ENST00000373253 LPAP08519 4548 aa6.61□□□□□ -1.35
NCDN-203ENST00000373253 TPRXLQ17RH7 258 aa6.61□□□□□ -1.35
NCDN-203ENST00000373253 M0R2T5 61 aa6.58□□□□□ -1.36
NCDN-203ENST00000373253 PKHD1L1Q86WI1 4243 aa6.58□□□□□ -1.36
NCDN-203ENST00000373253 KRTAP13-4Q3LI77 160 aa6.55□□□□□ -1.36
NCDN-203ENST00000373253 KRTAP3-3Q9BYR6 98 aa6.53□□□□□ -1.36
NCDN-203ENST00000373253 HERC2O95714 4834 aa6.52□□□□□ -1.37
NCDN-203ENST00000373253 ABCA13Q86UQ4 5058 aa6.5□□□□□ -1.37
NCDN-203ENST00000373253 KRTAP10-6P60371 365 aaPredicted RBP6.49□□□□□ -1.37
NCDN-203ENST00000373253 CAMK2N1Q7Z7J9 78 aa6.47□□□□□ -1.37
NCDN-203ENST00000373253 MUC2Q02817 5179 aa6.44□□□□□ -1.38
NCDN-203ENST00000373253 TNXBP22105 4242 aa6.42□□□□□ -1.38
NCDN-203ENST00000373253 KRTAP12-2P59991 146 aa6.4□□□□□ -1.39
NCDN-203ENST00000373253 KRTAP3-2Q9BYR7 98 aa6.4□□□□□ -1.39
NCDN-203ENST00000373253 KRTAP4-1Q9BYQ7 146 aa6.35□□□□□ -1.39
NCDN-203ENST00000373253 HERC1Q15751 4861 aa6.29□□□□□ -1.4
NCDN-203ENST00000373253 LUZP6Q538Z0 58 aa6.29□□□□□ -1.4
NCDN-203ENST00000373253 LORP23490 312 aaPredicted RBP6.27□□□□□ -1.41
NCDN-203ENST00000373253 KRTAP12-1P59990 96 aa6.26□□□□□ -1.41
NCDN-203ENST00000373253 RNF213Q63HN8 5207 aa6.22□□□□□ -1.41
NCDN-203ENST00000373253 KRTAP15-1Q3LI76 137 aa6.2□□□□□ -1.42
NCDN-203ENST00000373253 FAT4Q6V0I7 4981 aa6.15□□□□□ -1.43
NCDN-203ENST00000373253 BIRC6Q9NR09 4857 aa6.08□□□□□ -1.44
NCDN-203ENST00000373253 KRTAP10-10P60014 251 aa6.08□□□□□ -1.44
NCDN-203ENST00000373253 PCLOQ9Y6V0 5065 aa6.07□□□□□ -1.44
NCDN-203ENST00000373253 UBR4Q5T4S7 5183 aa6.04□□□□□ -1.44
NCDN-203ENST00000373253 PLAC4Q8WY50 150 aa6.03□□□□□ -1.44
NCDN-203ENST00000373253 TNP1P09430 55 aa5.89□□□□□ -1.47
NCDN-203ENST00000373253 MUC17Q685J3 4493 aa5.79□□□□□ -1.48
NCDN-203ENST00000373253 HMCN2Q8NDA2 5059 aa5.78□□□□□ -1.48
NCDN-203ENST00000373253 FSIP2Q5CZC0 6907 aa5.73□□□□□ -1.49
NCDN-203ENST00000373253 KRTAP19-2Q3LHN2 52 aa5.73□□□□□ -1.49
NCDN-203ENST00000373253 MT1HP80294 61 aa5.72□□□□□ -1.49
NCDN-203ENST00000373253 FLGP20930 4061 aaPredicted RBP5.69□□□□□ -1.5
NCDN-203ENST00000373253 LCE2CQ5TA81 110 aa5.66□□□□□ -1.5
NCDN-203ENST00000373253 MT1FP04733 61 aa5.65□□□□□ -1.51
NCDN-203ENST00000373253 MT2AP02795 61 aa5.62□□□□□ -1.51
NCDN-203ENST00000373253 PP632Q6XCG6 107 aa5.61□□□□□ -1.51
NCDN-203ENST00000373253 KRTAP19-1Q8IUB9 90 aa5.54□□□□□ -1.52
NCDN-203ENST00000373253 USH2AO75445 5202 aa5.52□□□□□ -1.53
NCDN-203ENST00000373253 LCE3AQ5TA76 89 aa5.48□□□□□ -1.53
NCDN-203ENST00000373253 SPRR2GQ9BYE4 73 aa5.46□□□□□ -1.54
NCDN-203ENST00000373253 KRTAP9-8Q9BYQ0 159 aa5.44□□□□□ -1.54
NCDN-203ENST00000373253 PRO2289Q9P1D8 64 aa5.38□□□□□ -1.55
NCDN-203ENST00000373253 KRTAP10-12P60413 245 aa5.34□□□□□ -1.55
NCDN-203ENST00000373253 KMT2DO14686 5537 aa5.29□□□□□ -1.56
NCDN-203ENST00000373253 MT1BP07438 61 aa5.28□□□□□ -1.56
NCDN-203ENST00000373253 KRTAP10-7P60409 375 aaPredicted RBP5.25□□□□□ -1.57
NCDN-203ENST00000373253 KRTAP12-3P60328 96 aa5.24□□□□□ -1.57
NCDN-203ENST00000373253 MT1XP80297 61 aa5.22□□□□□ -1.57
NCDN-203ENST00000373253 KRTAP10-5P60370 271 aa5.2□□□□□ -1.58
NCDN-203ENST00000373253 KRTAP9-3Q9BYQ3 159 aa5.2□□□□□ -1.58
NCDN-203ENST00000373253 KRTAP19-8Q3LI54 63 aa5.16□□□□□ -1.58
NCDN-203ENST00000373253 LCE2BO14633 110 aa5.16□□□□□ -1.58
NCDN-203ENST00000373253 KRTAP4-8A0A0G2JLE6 195 aa5.14□□□□□ -1.59
NCDN-203ENST00000373253 KRTAP4-8Q9BYQ9 185 aa5.14□□□□□ -1.59
NCDN-203ENST00000373253 KRTAP19-5Q3LI72 72 aa5.05□□□□□ -1.6
NCDN-203ENST00000373253 KRTAP23-1A1A580 65 aa5.02□□□□□ -1.61
NCDN-203ENST00000373253 SPRR5A0A1B0GTR4 108 aa5.02□□□□□ -1.61
NCDN-203ENST00000373253 KRTAP8-1Q8IUC2 63 aa5□□□□□ -1.61
NCDN-203ENST00000373253 DSTQ03001 7570 aaKnown RBP5□□□□□ -1.61
NCDN-203ENST00000373253 CRCT1Q9UGL9 99 aa5□□□□□ -1.61
NCDN-203ENST00000373253 INE1O15225 51 aa4.95□□□□□ -1.62
NCDN-203ENST00000373253 OBSCNQ5VST9 7968 aa4.95□□□□□ -1.62
NCDN-203ENST00000373253 LCE2AQ5TA79 106 aaPredicted RBP4.94□□□□□ -1.62
NCDN-203ENST00000373253 KRTAP4-7Q9BYR0 210 aa4.88□□□□□ -1.63
NCDN-203ENST00000373253 SYNE1Q8NF91 8797 aaKnown RBP4.86□□□□□ -1.63
NCDN-203ENST00000373253 FCGBPQ9Y6R7 5405 aaPredicted RBP4.83□□□□□ -1.64
NCDN-203ENST00000373253 SSPOA2VEC9 5147 aa4.8□□□□□ -1.64
NCDN-203ENST00000373253 MUC12Q9UKN1 5478 aa4.78□□□□□ -1.64
NCDN-203ENST00000373253 LCE3CQ5T5A8 94 aa4.76□□□□□ -1.65
NCDN-203ENST00000373253 SPRR2FQ96RM1 72 aa4.67□□□□□ -1.66
NCDN-203ENST00000373253 KRTAP4-3Q9BYR4 195 aa4.61□□□□□ -1.67
NCDN-203ENST00000373253 KRTAP19-7Q3SYF9 63 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms