RNA–Protein interactions for RNA: ENST00000373093.4

GRIK3-202, Transcript of glutamate ionotropic receptor kainate type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIK3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK3-202ENST00000373093 H1FX-AS1Q4G0G2 97 aa5.81□□□□□ -1.48
GRIK3-202ENST00000373093 KRTAP25-1Q3LHN0 102 aa5.8□□□□□ -1.48
GRIK3-202ENST00000373093 LPAP08519 4548 aa5.78□□□□□ -1.48
GRIK3-202ENST00000373093 KRTAP10-4P60372 401 aaPredicted RBP5.78□□□□□ -1.48
GRIK3-202ENST00000373093 KRTAP17-1Q9BYP8 105 aa5.78□□□□□ -1.48
GRIK3-202ENST00000373093 RYR1P21817 5038 aa5.78□□□□□ -1.48
GRIK3-202ENST00000373093 COX6B2Q6YFQ2 88 aa5.77□□□□□ -1.49
GRIK3-202ENST00000373093 A0A1B0GVY2 172 aa5.75□□□□□ -1.49
GRIK3-202ENST00000373093 C20orf166-AS1Q96NR2 134 aa5.74□□□□□ -1.49
GRIK3-202ENST00000373093 ROMO1P60602 79 aa5.73□□□□□ -1.49
GRIK3-202ENST00000373093 C10orf95Q9H7T3 257 aa5.71□□□□□ -1.5
GRIK3-202ENST00000373093 KRTAP13-4Q3LI77 160 aa5.7□□□□□ -1.5
GRIK3-202ENST00000373093 KRTAP10-8P60410 259 aa5.69□□□□□ -1.5
GRIK3-202ENST00000373093 ABCA13Q86UQ4 5058 aa5.69□□□□□ -1.5
GRIK3-202ENST00000373093 TNXBP22105 4242 aa5.68□□□□□ -1.5
GRIK3-202ENST00000373093 K7ERS5 55 aa5.67□□□□□ -1.5
GRIK3-202ENST00000373093 LRP2P98164 4655 aa5.66□□□□□ -1.5
GRIK3-202ENST00000373093 RPS29P62273 56 aaKnown RBP5.66□□□□□ -1.5
GRIK3-202ENST00000373093 P0C880 135 aa5.65□□□□□ -1.5
GRIK3-202ENST00000373093 Q5VSD8 79 aa5.62□□□□□ -1.51
GRIK3-202ENST00000373093 KRTAP10-6P60371 365 aaPredicted RBP5.62□□□□□ -1.51
GRIK3-202ENST00000373093 TPRXLQ17RH7 258 aa5.61□□□□□ -1.51
GRIK3-202ENST00000373093 SPINT4Q6UDR6 99 aa5.61□□□□□ -1.51
GRIK3-202ENST00000373093 KRTAP4-5Q9BYR2 181 aa5.6□□□□□ -1.51
GRIK3-202ENST00000373093 KRTAP3-3Q9BYR6 98 aa5.6□□□□□ -1.51
GRIK3-202ENST00000373093 RPL37P61927 97 aaKnown RBP5.59□□□□□ -1.51
GRIK3-202ENST00000373093 MUC2Q02817 5179 aa5.57□□□□□ -1.52
GRIK3-202ENST00000373093 XP32Q5T750 250 aa5.55□□□□□ -1.52
GRIK3-202ENST00000373093 KRTAP3-2Q9BYR7 98 aa5.55□□□□□ -1.52
GRIK3-202ENST00000373093 KRTAP12-2P59991 146 aa5.52□□□□□ -1.53
GRIK3-202ENST00000373093 S4R3F8 94 aa5.5□□□□□ -1.53
GRIK3-202ENST00000373093 HERC2O95714 4834 aa5.49□□□□□ -1.53
GRIK3-202ENST00000373093 HERC1Q15751 4861 aa5.48□□□□□ -1.53
GRIK3-202ENST00000373093 NDUFAF8A1L188 74 aa5.46□□□□□ -1.53
GRIK3-202ENST00000373093 PCLOQ9Y6V0 5065 aa5.43□□□□□ -1.54
GRIK3-202ENST00000373093 MT1HL1P0DM35 61 aa5.42□□□□□ -1.54
GRIK3-202ENST00000373093 KRTAP12-1P59990 96 aa5.38□□□□□ -1.55
GRIK3-202ENST00000373093 RNF213Q63HN8 5207 aa5.36□□□□□ -1.55
GRIK3-202ENST00000373093 KRTAP15-1Q3LI76 137 aa5.33□□□□□ -1.56
GRIK3-202ENST00000373093 FAT4Q6V0I7 4981 aa5.26□□□□□ -1.57
GRIK3-202ENST00000373093 M0QZ58 72 aa5.26□□□□□ -1.57
GRIK3-202ENST00000373093 J3QL48 77 aa5.25□□□□□ -1.57
GRIK3-202ENST00000373093 LORP23490 312 aaPredicted RBP5.25□□□□□ -1.57
GRIK3-202ENST00000373093 UBR4Q5T4S7 5183 aa5.24□□□□□ -1.57
GRIK3-202ENST00000373093 BIRC6Q9NR09 4857 aa5.22□□□□□ -1.57
GRIK3-202ENST00000373093 KRTAP4-1Q9BYQ7 146 aa5.2□□□□□ -1.58
GRIK3-202ENST00000373093 R4GN34 69 aa5.19□□□□□ -1.58
GRIK3-202ENST00000373093 MUC17Q685J3 4493 aa5.17□□□□□ -1.58
GRIK3-202ENST00000373093 SEC61BP60468 96 aaKnown RBP5.1□□□□□ -1.59
GRIK3-202ENST00000373093 PLAC4Q8WY50 150 aa5.06□□□□□ -1.6
GRIK3-202ENST00000373093 LUZP6Q538Z0 58 aa5.04□□□□□ -1.6
GRIK3-202ENST00000373093 HMCN2Q8NDA2 5059 aa5.02□□□□□ -1.61
GRIK3-202ENST00000373093 CAMK2N1Q7Z7J9 78 aa5□□□□□ -1.61
GRIK3-202ENST00000373093 LCE2DQ5TA82 110 aaPredicted RBP4.97□□□□□ -1.61
GRIK3-202ENST00000373093 KRTAP19-2Q3LHN2 52 aa4.92□□□□□ -1.62
GRIK3-202ENST00000373093 FLGP20930 4061 aaPredicted RBP4.84□□□□□ -1.63
GRIK3-202ENST00000373093 FSIP2Q5CZC0 6907 aa4.77□□□□□ -1.65
GRIK3-202ENST00000373093 USH2AO75445 5202 aa4.74□□□□□ -1.65
GRIK3-202ENST00000373093 M0R2T5 61 aa4.74□□□□□ -1.65
GRIK3-202ENST00000373093 PP632Q6XCG6 107 aa4.71□□□□□ -1.66
GRIK3-202ENST00000373093 TNP1P09430 55 aa4.71□□□□□ -1.66
GRIK3-202ENST00000373093 LCE2CQ5TA81 110 aa4.66□□□□□ -1.66
GRIK3-202ENST00000373093 KRTAP19-1Q8IUB9 90 aa4.59□□□□□ -1.67
GRIK3-202ENST00000373093 KRTAP10-10P60014 251 aa4.57□□□□□ -1.68
GRIK3-202ENST00000373093 MT1FP04733 61 aa4.54□□□□□ -1.68
GRIK3-202ENST00000373093 MT1HP80294 61 aa4.54□□□□□ -1.68
GRIK3-202ENST00000373093 LCE3AQ5TA76 89 aa4.54□□□□□ -1.68
GRIK3-202ENST00000373093 KMT2DO14686 5537 aa4.5□□□□□ -1.69
GRIK3-202ENST00000373093 MT2AP02795 61 aa4.49□□□□□ -1.69
GRIK3-202ENST00000373093 SPRR5A0A1B0GTR4 108 aa4.48□□□□□ -1.69
GRIK3-202ENST00000373093 SPRR2GQ9BYE4 73 aa4.48□□□□□ -1.69
GRIK3-202ENST00000373093 LCE2BO14633 110 aa4.47□□□□□ -1.69
GRIK3-202ENST00000373093 KRTAP9-8Q9BYQ0 159 aa4.43□□□□□ -1.7
GRIK3-202ENST00000373093 KRTAP23-1A1A580 65 aa4.35□□□□□ -1.71
GRIK3-202ENST00000373093 MT1BP07438 61 aa4.34□□□□□ -1.71
GRIK3-202ENST00000373093 KRTAP10-5P60370 271 aa4.33□□□□□ -1.72
GRIK3-202ENST00000373093 MT1XP80297 61 aa4.32□□□□□ -1.72
GRIK3-202ENST00000373093 KRTAP10-7P60409 375 aaPredicted RBP4.32□□□□□ -1.72
GRIK3-202ENST00000373093 LCE2AQ5TA79 106 aaPredicted RBP4.32□□□□□ -1.72
GRIK3-202ENST00000373093 KRTAP12-3P60328 96 aa4.25□□□□□ -1.73
GRIK3-202ENST00000373093 KRTAP10-12P60413 245 aa4.24□□□□□ -1.73
GRIK3-202ENST00000373093 KRTAP19-8Q3LI54 63 aa4.23□□□□□ -1.73
GRIK3-202ENST00000373093 KRTAP8-1Q8IUC2 63 aa4.23□□□□□ -1.73
GRIK3-202ENST00000373093 PRO2289Q9P1D8 64 aa4.23□□□□□ -1.73
GRIK3-202ENST00000373093 KRTAP9-3Q9BYQ3 159 aa4.21□□□□□ -1.74
GRIK3-202ENST00000373093 KRTAP4-8A0A0G2JLE6 195 aa4.16□□□□□ -1.74
GRIK3-202ENST00000373093 KRTAP4-8Q9BYQ9 185 aa4.16□□□□□ -1.74
GRIK3-202ENST00000373093 SSPOA2VEC9 5147 aa4.15□□□□□ -1.75
GRIK3-202ENST00000373093 INE1O15225 51 aa4.12□□□□□ -1.75
GRIK3-202ENST00000373093 KRTAP19-5Q3LI72 72 aa4.11□□□□□ -1.75
GRIK3-202ENST00000373093 KRTAP4-7Q9BYR0 210 aa4.05□□□□□ -1.76
GRIK3-202ENST00000373093 DSTQ03001 7570 aaKnown RBP4.04□□□□□ -1.76
GRIK3-202ENST00000373093 MUC12Q9UKN1 5478 aa4.02□□□□□ -1.77
GRIK3-202ENST00000373093 KRTAP9-6A8MVA2 160 aa3.99□□□□□ -1.77
GRIK3-202ENST00000373093 FCGBPQ9Y6R7 5405 aaPredicted RBP3.98□□□□□ -1.77
GRIK3-202ENST00000373093 LCE3CQ5T5A8 94 aa3.97□□□□□ -1.77
GRIK3-202ENST00000373093 SYNE2Q8WXH0 6885 aaKnown RBP3.93□□□□□ -1.78
GRIK3-202ENST00000373093 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.79
GRIK3-202ENST00000373093 MACF1Q9UPN3 7388 aaKnown RBP3.86□□□□□ -1.79
GRIK3-202ENST00000373093 KRTAP19-7Q3SYF9 63 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms