RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 EPPK1P58107 5090 aaKnown RBP9.77□□□□□ -0.85
USP49-202ENST00000373010 KTN1-AS1Q86SY8 53 aa9.7□□□□□ -0.86
USP49-202ENST00000373010 KRTAP4-5Q9BYR2 181 aa9.58□□□□□ -0.88
USP49-202ENST00000373010 H0YAA0 97 aa9.57□□□□□ -0.88
USP49-202ENST00000373010 A0A1B0GU33 70 aa9.56□□□□□ -0.88
USP49-202ENST00000373010 KRTAP3-3Q9BYR6 98 aa9.55□□□□□ -0.88
USP49-202ENST00000373010 H1FX-AS1Q4G0G2 97 aa9.54□□□□□ -0.88
USP49-202ENST00000373010 RBM12B-AS1Q9P1G2 102 aa9.54□□□□□ -0.88
USP49-202ENST00000373010 LRP2P98164 4655 aa9.5□□□□□ -0.89
USP49-202ENST00000373010 TPRXLQ17RH7 258 aa9.5□□□□□ -0.89
USP49-202ENST00000373010 S4R3F8 94 aa9.48□□□□□ -0.89
USP49-202ENST00000373010 ABCA13Q86UQ4 5058 aa9.47□□□□□ -0.89
USP49-202ENST00000373010 LPAP08519 4548 aa9.46□□□□□ -0.89
USP49-202ENST00000373010 ADM2Q7Z4H4 148 aa9.43□□□□□ -0.9
USP49-202ENST00000373010 PRAC1Q96KF2 57 aa9.41□□□□□ -0.9
USP49-202ENST00000373010 KRTAP10-6P60371 365 aaPredicted RBP9.39□□□□□ -0.91
USP49-202ENST00000373010 KRTAP3-2Q9BYR7 98 aa9.36□□□□□ -0.91
USP49-202ENST00000373010 KRTAP13-4Q3LI77 160 aa9.27□□□□□ -0.92
USP49-202ENST00000373010 P0C880 135 aa9.26□□□□□ -0.93
USP49-202ENST00000373010 J3QL48 77 aa9.23□□□□□ -0.93
USP49-202ENST00000373010 HERC2O95714 4834 aa9.21□□□□□ -0.94
USP49-202ENST00000373010 A0A0D9SG42 100 aa9.18□□□□□ -0.94
USP49-202ENST00000373010 CSAG1Q6PB30 78 aa9.17□□□□□ -0.94
USP49-202ENST00000373010 SEC61BP60468 96 aaKnown RBP9.15□□□□□ -0.94
USP49-202ENST00000373010 K7ERS5 55 aa9.15□□□□□ -0.94
USP49-202ENST00000373010 KRTAP4-1Q9BYQ7 146 aa9.1□□□□□ -0.95
USP49-202ENST00000373010 MUC17Q685J3 4493 aa9.09□□□□□ -0.95
USP49-202ENST00000373010 BIRC6Q9NR09 4857 aa9.07□□□□□ -0.96
USP49-202ENST00000373010 LINC01554Q52M75 96 aa9.02□□□□□ -0.97
USP49-202ENST00000373010 KRTAP12-2P59991 146 aa8.94□□□□□ -0.98
USP49-202ENST00000373010 CRIPTQ9P021 101 aa8.94□□□□□ -0.98
USP49-202ENST00000373010 ROMO1P60602 79 aa8.93□□□□□ -0.98
USP49-202ENST00000373010 KRTAP25-1Q3LHN0 102 aa8.92□□□□□ -0.98
USP49-202ENST00000373010 M0QZ58 72 aa8.91□□□□□ -0.98
USP49-202ENST00000373010 KRTAP12-1P59990 96 aa8.89□□□□□ -0.99
USP49-202ENST00000373010 KRTAP19-2Q3LHN2 52 aa8.89□□□□□ -0.99
USP49-202ENST00000373010 SPINT4Q6UDR6 99 aa8.88□□□□□ -0.99
USP49-202ENST00000373010 PCLOQ9Y6V0 5065 aa8.78□□□□□ -1
USP49-202ENST00000373010 LORP23490 312 aaPredicted RBP8.78□□□□□ -1
USP49-202ENST00000373010 R4GN34 69 aa8.78□□□□□ -1
USP49-202ENST00000373010 HERC1Q15751 4861 aa8.77□□□□□ -1.01
USP49-202ENST00000373010 MUC2Q02817 5179 aa8.76□□□□□ -1.01
USP49-202ENST00000373010 HMCN2Q8NDA2 5059 aa8.69□□□□□ -1.02
USP49-202ENST00000373010 C10orf95Q9H7T3 257 aa8.65□□□□□ -1.02
USP49-202ENST00000373010 FLGP20930 4061 aaPredicted RBP8.62□□□□□ -1.03
USP49-202ENST00000373010 H3BS24 57 aa8.52□□□□□ -1.05
USP49-202ENST00000373010 LCE2CQ5TA81 110 aa8.45□□□□□ -1.06
USP49-202ENST00000373010 FAT4Q6V0I7 4981 aa8.38□□□□□ -1.07
USP49-202ENST00000373010 RNF213Q63HN8 5207 aa8.31□□□□□ -1.08
USP49-202ENST00000373010 CAMK2N1Q7Z7J9 78 aa8.31□□□□□ -1.08
USP49-202ENST00000373010 UBR4Q5T4S7 5183 aa8.29□□□□□ -1.08
USP49-202ENST00000373010 M0R2T5 61 aa8.24□□□□□ -1.09
USP49-202ENST00000373010 MT1HP80294 61 aa8.23□□□□□ -1.09
USP49-202ENST00000373010 KRTAP19-1Q8IUB9 90 aa8.11□□□□□ -1.11
USP49-202ENST00000373010 SPRR2GQ9BYE4 73 aa8.11□□□□□ -1.11
USP49-202ENST00000373010 KRTAP15-1Q3LI76 137 aa8.07□□□□□ -1.12
USP49-202ENST00000373010 MT2AP02795 61 aa8.05□□□□□ -1.12
USP49-202ENST00000373010 MT1FP04733 61 aa8.05□□□□□ -1.12
USP49-202ENST00000373010 KRTAP10-10P60014 251 aa8.03□□□□□ -1.12
USP49-202ENST00000373010 KRTAP9-8Q9BYQ0 159 aa8.01□□□□□ -1.13
USP49-202ENST00000373010 PLAC4Q8WY50 150 aa7.99□□□□□ -1.13
USP49-202ENST00000373010 PP632Q6XCG6 107 aa7.96□□□□□ -1.14
USP49-202ENST00000373010 TNP1P09430 55 aa7.94□□□□□ -1.14
USP49-202ENST00000373010 NDUFAF8A1L188 74 aa7.87□□□□□ -1.15
USP49-202ENST00000373010 KRTAP19-8Q3LI54 63 aa7.8□□□□□ -1.16
USP49-202ENST00000373010 KRTAP23-1A1A580 65 aa7.76□□□□□ -1.17
USP49-202ENST00000373010 MT1BP07438 61 aa7.73□□□□□ -1.17
USP49-202ENST00000373010 KRTAP9-3Q9BYQ3 159 aa7.69□□□□□ -1.18
USP49-202ENST00000373010 KRTAP10-5P60370 271 aa7.61□□□□□ -1.19
USP49-202ENST00000373010 MT1XP80297 61 aa7.61□□□□□ -1.19
USP49-202ENST00000373010 LCE3AQ5TA76 89 aa7.6□□□□□ -1.19
USP49-202ENST00000373010 LCE2AQ5TA79 106 aaPredicted RBP7.44□□□□□ -1.22
USP49-202ENST00000373010 LCE2BO14633 110 aa7.43□□□□□ -1.22
USP49-202ENST00000373010 KRTAP10-7P60409 375 aaPredicted RBP7.39□□□□□ -1.23
USP49-202ENST00000373010 LUZP6Q538Z0 58 aa7.39□□□□□ -1.23
USP49-202ENST00000373010 KRTAP10-12P60413 245 aa7.38□□□□□ -1.23
USP49-202ENST00000373010 KRTAP8-1Q8IUC2 63 aa7.38□□□□□ -1.23
USP49-202ENST00000373010 SPRR5A0A1B0GTR4 108 aa7.35□□□□□ -1.23
USP49-202ENST00000373010 PRO2289Q9P1D8 64 aa7.33□□□□□ -1.24
USP49-202ENST00000373010 USH2AO75445 5202 aa7.24□□□□□ -1.25
USP49-202ENST00000373010 KRTAP12-3P60328 96 aa7.23□□□□□ -1.25
USP49-202ENST00000373010 KRTAP19-5Q3LI72 72 aa7.04□□□□□ -1.28
USP49-202ENST00000373010 KMT2DO14686 5537 aa7.01□□□□□ -1.29
USP49-202ENST00000373010 A0A0A0MQY5 61 aa7□□□□□ -1.29
USP49-202ENST00000373010 KRTAP4-8A0A0G2JLE6 195 aa7□□□□□ -1.29
USP49-202ENST00000373010 KRTAP4-8Q9BYQ9 185 aa7□□□□□ -1.29
USP49-202ENST00000373010 SSPOA2VEC9 5147 aa6.88□□□□□ -1.31
USP49-202ENST00000373010 LCE3CQ5T5A8 94 aa6.8□□□□□ -1.32
USP49-202ENST00000373010 KRTAP19-7Q3SYF9 63 aa6.78□□□□□ -1.32
USP49-202ENST00000373010 KRTAP19-6Q3LI70 58 aa6.72□□□□□ -1.33
USP49-202ENST00000373010 FSIP2Q5CZC0 6907 aa6.69□□□□□ -1.34
USP49-202ENST00000373010 MT1EP04732 61 aa6.6□□□□□ -1.35
USP49-202ENST00000373010 KRTAP4-7Q9BYR0 210 aa6.6□□□□□ -1.35
USP49-202ENST00000373010 MT1LQ93083 61 aa6.57□□□□□ -1.36
USP49-202ENST00000373010 KRTAP9-6A8MVA2 160 aa6.56□□□□□ -1.36
USP49-202ENST00000373010 LCE2DQ5TA82 110 aaPredicted RBP6.46□□□□□ -1.38
USP49-202ENST00000373010 KRTAP19-4Q3LI73 84 aa6.42□□□□□ -1.38
USP49-202ENST00000373010 FCGBPQ9Y6R7 5405 aaPredicted RBP6.41□□□□□ -1.38
USP49-202ENST00000373010 INE1O15225 51 aa6.28□□□□□ -1.4
USP49-202ENST00000373010 MUC12Q9UKN1 5478 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms