RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 ROMO1P60602 79 aa7.81□□□□□ -1.16
COL9A2-202ENST00000372748 KIAA1109Q2LD37 5005 aa7.8□□□□□ -1.16
COL9A2-202ENST00000372748 K7ERS5 55 aa7.79□□□□□ -1.16
COL9A2-202ENST00000372748 DMBT1Q9UGM3 2413 aaPredicted RBP7.77□□□□□ -1.16
COL9A2-202ENST00000372748 LRP1Q07954 4544 aaKnown RBP7.73□□□□□ -1.17
COL9A2-202ENST00000372748 HSPG2P98160 4391 aa7.72□□□□□ -1.17
COL9A2-202ENST00000372748 A0A0D9SG42 100 aa7.71□□□□□ -1.18
COL9A2-202ENST00000372748 KRTAP13-4Q3LI77 160 aa7.68□□□□□ -1.18
COL9A2-202ENST00000372748 KRTAP10-6P60371 365 aaPredicted RBP7.66□□□□□ -1.18
COL9A2-202ENST00000372748 RYR1P21817 5038 aa7.65□□□□□ -1.18
COL9A2-202ENST00000372748 MYCBP2O75592 4640 aa7.65□□□□□ -1.18
COL9A2-202ENST00000372748 FAT3Q8TDW7 4589 aa7.65□□□□□ -1.19
COL9A2-202ENST00000372748 RPL37P61927 97 aaKnown RBP7.65□□□□□ -1.19
COL9A2-202ENST00000372748 KRTAP17-1Q9BYP8 105 aa7.65□□□□□ -1.19
COL9A2-202ENST00000372748 KRTAP3-3Q9BYR6 98 aa7.63□□□□□ -1.19
COL9A2-202ENST00000372748 P0C880 135 aa7.62□□□□□ -1.19
COL9A2-202ENST00000372748 TNXBP22105 4242 aa7.62□□□□□ -1.19
COL9A2-202ENST00000372748 TPRXLQ17RH7 258 aa7.57□□□□□ -1.2
COL9A2-202ENST00000372748 Q5VSD8 79 aa7.57□□□□□ -1.2
COL9A2-202ENST00000372748 KRTAP3-2Q9BYR7 98 aa7.57□□□□□ -1.2
COL9A2-202ENST00000372748 C10orf95Q9H7T3 257 aa7.56□□□□□ -1.2
COL9A2-202ENST00000372748 KRTAP10-8P60410 259 aa7.55□□□□□ -1.2
COL9A2-202ENST00000372748 SPINT4Q6UDR6 99 aa7.53□□□□□ -1.2
COL9A2-202ENST00000372748 S4R3F8 94 aa7.5□□□□□ -1.21
COL9A2-202ENST00000372748 XP32Q5T750 250 aa7.48□□□□□ -1.21
COL9A2-202ENST00000372748 KRTAP4-5Q9BYR2 181 aa7.45□□□□□ -1.22
COL9A2-202ENST00000372748 KRTAP12-2P59991 146 aa7.45□□□□□ -1.22
COL9A2-202ENST00000372748 A0A0A0MQY5 61 aa7.43□□□□□ -1.22
COL9A2-202ENST00000372748 ABCA13Q86UQ4 5058 aa7.39□□□□□ -1.23
COL9A2-202ENST00000372748 LPAP08519 4548 aa7.37□□□□□ -1.23
COL9A2-202ENST00000372748 HERC2O95714 4834 aa7.34□□□□□ -1.23
COL9A2-202ENST00000372748 MT1HL1P0DM35 61 aa7.33□□□□□ -1.24
COL9A2-202ENST00000372748 KRTAP12-1P59990 96 aa7.33□□□□□ -1.24
COL9A2-202ENST00000372748 NDUFAF8A1L188 74 aa7.32□□□□□ -1.24
COL9A2-202ENST00000372748 BIRC6Q9NR09 4857 aa7.31□□□□□ -1.24
COL9A2-202ENST00000372748 KRTAP15-1Q3LI76 137 aa7.3□□□□□ -1.24
COL9A2-202ENST00000372748 LRP2P98164 4655 aa7.29□□□□□ -1.24
COL9A2-202ENST00000372748 PCLOQ9Y6V0 5065 aa7.19□□□□□ -1.26
COL9A2-202ENST00000372748 M0QZ58 72 aa7.15□□□□□ -1.27
COL9A2-202ENST00000372748 HERC1Q15751 4861 aa7.14□□□□□ -1.27
COL9A2-202ENST00000372748 LCE2DQ5TA82 110 aaPredicted RBP7.13□□□□□ -1.27
COL9A2-202ENST00000372748 R4GN34 69 aa7.02□□□□□ -1.28
COL9A2-202ENST00000372748 MUC2Q02817 5179 aa6.95□□□□□ -1.3
COL9A2-202ENST00000372748 LORP23490 312 aaPredicted RBP6.94□□□□□ -1.3
COL9A2-202ENST00000372748 LUZP6Q538Z0 58 aa6.92□□□□□ -1.3
COL9A2-202ENST00000372748 MUC17Q685J3 4493 aa6.9□□□□□ -1.31
COL9A2-202ENST00000372748 KRTAP4-1Q9BYQ7 146 aa6.89□□□□□ -1.31
COL9A2-202ENST00000372748 PLAC4Q8WY50 150 aa6.89□□□□□ -1.31
COL9A2-202ENST00000372748 SEC61BP60468 96 aaKnown RBP6.87□□□□□ -1.31
COL9A2-202ENST00000372748 HMCN2Q8NDA2 5059 aa6.8□□□□□ -1.32
COL9A2-202ENST00000372748 RNF213Q63HN8 5207 aa6.75□□□□□ -1.33
COL9A2-202ENST00000372748 UBR4Q5T4S7 5183 aa6.74□□□□□ -1.33
COL9A2-202ENST00000372748 CAMK2N1Q7Z7J9 78 aa6.72□□□□□ -1.33
COL9A2-202ENST00000372748 KRTAP19-2Q3LHN2 52 aa6.69□□□□□ -1.34
COL9A2-202ENST00000372748 FAT4Q6V0I7 4981 aa6.62□□□□□ -1.35
COL9A2-202ENST00000372748 PP632Q6XCG6 107 aa6.61□□□□□ -1.35
COL9A2-202ENST00000372748 FLGP20930 4061 aaPredicted RBP6.54□□□□□ -1.36
COL9A2-202ENST00000372748 TNP1P09430 55 aa6.44□□□□□ -1.38
COL9A2-202ENST00000372748 LCE2CQ5TA81 110 aa6.36□□□□□ -1.39
COL9A2-202ENST00000372748 LCE2AQ5TA79 106 aaPredicted RBP6.34□□□□□ -1.39
COL9A2-202ENST00000372748 LCE2BO14633 110 aa6.3□□□□□ -1.4
COL9A2-202ENST00000372748 SPRR5A0A1B0GTR4 108 aa6.28□□□□□ -1.4
COL9A2-202ENST00000372748 KRTAP23-1A1A580 65 aa6.25□□□□□ -1.41
COL9A2-202ENST00000372748 M0R2T5 61 aa6.25□□□□□ -1.41
COL9A2-202ENST00000372748 KRTAP19-1Q8IUB9 90 aa6.17□□□□□ -1.42
COL9A2-202ENST00000372748 SPRR2GQ9BYE4 73 aa6.15□□□□□ -1.43
COL9A2-202ENST00000372748 MT1HP80294 61 aa6.14□□□□□ -1.43
COL9A2-202ENST00000372748 LCE3AQ5TA76 89 aa6.12□□□□□ -1.43
COL9A2-202ENST00000372748 KRTAP10-10P60014 251 aa6.08□□□□□ -1.44
COL9A2-202ENST00000372748 MT1FP04733 61 aa6.07□□□□□ -1.44
COL9A2-202ENST00000372748 MT2AP02795 61 aa6.05□□□□□ -1.44
COL9A2-202ENST00000372748 KRTAP9-8Q9BYQ0 159 aa6□□□□□ -1.45
COL9A2-202ENST00000372748 PRO2289Q9P1D8 64 aa5.95□□□□□ -1.46
COL9A2-202ENST00000372748 KRTAP8-1Q8IUC2 63 aa5.88□□□□□ -1.47
COL9A2-202ENST00000372748 KRTAP19-8Q3LI54 63 aa5.85□□□□□ -1.47
COL9A2-202ENST00000372748 MT1BP07438 61 aa5.85□□□□□ -1.47
COL9A2-202ENST00000372748 USH2AO75445 5202 aa5.83□□□□□ -1.48
COL9A2-202ENST00000372748 KRTAP10-5P60370 271 aa5.82□□□□□ -1.48
COL9A2-202ENST00000372748 MT1XP80297 61 aa5.81□□□□□ -1.48
COL9A2-202ENST00000372748 FSIP2Q5CZC0 6907 aa5.79□□□□□ -1.48
COL9A2-202ENST00000372748 KRTAP12-3P60328 96 aa5.79□□□□□ -1.48
COL9A2-202ENST00000372748 KRTAP10-12P60413 245 aa5.75□□□□□ -1.49
COL9A2-202ENST00000372748 KRTAP9-3Q9BYQ3 159 aa5.73□□□□□ -1.49
COL9A2-202ENST00000372748 INE1O15225 51 aa5.71□□□□□ -1.5
COL9A2-202ENST00000372748 KRTAP10-7P60409 375 aaPredicted RBP5.7□□□□□ -1.5
COL9A2-202ENST00000372748 KMT2DO14686 5537 aa5.54□□□□□ -1.52
COL9A2-202ENST00000372748 KRTAP19-5Q3LI72 72 aa5.49□□□□□ -1.53
COL9A2-202ENST00000372748 LCE3CQ5T5A8 94 aa5.44□□□□□ -1.54
COL9A2-202ENST00000372748 SSPOA2VEC9 5147 aa5.42□□□□□ -1.54
COL9A2-202ENST00000372748 KRTAP4-8A0A0G2JLE6 195 aa5.39□□□□□ -1.55
COL9A2-202ENST00000372748 KRTAP4-8Q9BYQ9 185 aa5.39□□□□□ -1.55
COL9A2-202ENST00000372748 KRTAP9-6A8MVA2 160 aa5.35□□□□□ -1.55
COL9A2-202ENST00000372748 KRTAP4-7Q9BYR0 210 aa5.26□□□□□ -1.57
COL9A2-202ENST00000372748 KRTAP19-7Q3SYF9 63 aa5.18□□□□□ -1.58
COL9A2-202ENST00000372748 FCGBPQ9Y6R7 5405 aaPredicted RBP5.16□□□□□ -1.58
COL9A2-202ENST00000372748 KRTAP2-3P0C7H8 128 aa5.14□□□□□ -1.59
COL9A2-202ENST00000372748 KRTAP2-4Q9BYR9 128 aa5.14□□□□□ -1.59
COL9A2-202ENST00000372748 KRTAP2-1Q9BYU5 128 aa5.14□□□□□ -1.59
COL9A2-202ENST00000372748 KRTAP9-2Q9BYQ4 174 aa5.11□□□□□ -1.59
COL9A2-202ENST00000372748 KRTAP19-6Q3LI70 58 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 178.4 ms