RNA–Protein interactions for RNA: ENST00000369598.5

PHTF1-202, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-202ENST00000369598 SPINT4Q6UDR6 99 aa8.23□□□□□ -1.09
PHTF1-202ENST00000369598 KRTAP17-1Q9BYP8 105 aa8.22□□□□□ -1.09
PHTF1-202ENST00000369598 KRTAP10-8P60410 259 aa8.2□□□□□ -1.1
PHTF1-202ENST00000369598 PKHD1L1Q86WI1 4243 aa8.2□□□□□ -1.1
PHTF1-202ENST00000369598 KIAA1109Q2LD37 5005 aa8.19□□□□□ -1.1
PHTF1-202ENST00000369598 C10orf95Q9H7T3 257 aa8.18□□□□□ -1.1
PHTF1-202ENST00000369598 H1FX-AS1Q4G0G2 97 aa8.17□□□□□ -1.1
PHTF1-202ENST00000369598 EPPK1P58107 5090 aaKnown RBP8.17□□□□□ -1.1
PHTF1-202ENST00000369598 LRP1Q07954 4544 aaKnown RBP8.15□□□□□ -1.11
PHTF1-202ENST00000369598 K7ERS5 55 aa8.13□□□□□ -1.11
PHTF1-202ENST00000369598 KRTAP3-1Q9BYR8 98 aa8.12□□□□□ -1.11
PHTF1-202ENST00000369598 NDUFAF8A1L188 74 aa8.11□□□□□ -1.11
PHTF1-202ENST00000369598 COX6B2Q6YFQ2 88 aa8.1□□□□□ -1.11
PHTF1-202ENST00000369598 TNXBP22105 4242 aa8.07□□□□□ -1.12
PHTF1-202ENST00000369598 MT1HL1P0DM35 61 aa8.03□□□□□ -1.12
PHTF1-202ENST00000369598 TPRXLQ17RH7 258 aa8.03□□□□□ -1.12
PHTF1-202ENST00000369598 FAT3Q8TDW7 4589 aa8.03□□□□□ -1.12
PHTF1-202ENST00000369598 MYCBP2O75592 4640 aa8□□□□□ -1.13
PHTF1-202ENST00000369598 C20orf166-AS1Q96NR2 134 aa8□□□□□ -1.13
PHTF1-202ENST00000369598 KRTAP4-5Q9BYR2 181 aa7.99□□□□□ -1.13
PHTF1-202ENST00000369598 KRTAP13-4Q3LI77 160 aa7.95□□□□□ -1.14
PHTF1-202ENST00000369598 RPL37P61927 97 aaKnown RBP7.91□□□□□ -1.14
PHTF1-202ENST00000369598 XP32Q5T750 250 aa7.83□□□□□ -1.16
PHTF1-202ENST00000369598 J3QL48 77 aa7.8□□□□□ -1.16
PHTF1-202ENST00000369598 KRTAP10-6P60371 365 aaPredicted RBP7.78□□□□□ -1.16
PHTF1-202ENST00000369598 BIRC6Q9NR09 4857 aa7.76□□□□□ -1.17
PHTF1-202ENST00000369598 ABCA13Q86UQ4 5058 aa7.74□□□□□ -1.17
PHTF1-202ENST00000369598 KRTAP15-1Q3LI76 137 aa7.74□□□□□ -1.17
PHTF1-202ENST00000369598 KRTAP12-2P59991 146 aa7.73□□□□□ -1.17
PHTF1-202ENST00000369598 HERC2O95714 4834 aa7.7□□□□□ -1.18
PHTF1-202ENST00000369598 S4R3F8 94 aa7.7□□□□□ -1.18
PHTF1-202ENST00000369598 KRTAP3-3Q9BYR6 98 aa7.67□□□□□ -1.18
PHTF1-202ENST00000369598 A0A0A0MQY5 61 aa7.66□□□□□ -1.18
PHTF1-202ENST00000369598 KRTAP3-2Q9BYR7 98 aa7.65□□□□□ -1.18
PHTF1-202ENST00000369598 LPAP08519 4548 aa7.59□□□□□ -1.2
PHTF1-202ENST00000369598 LRP2P98164 4655 aa7.58□□□□□ -1.2
PHTF1-202ENST00000369598 KRTAP12-1P59990 96 aa7.51□□□□□ -1.21
PHTF1-202ENST00000369598 SEC61BP60468 96 aaKnown RBP7.5□□□□□ -1.21
PHTF1-202ENST00000369598 PCLOQ9Y6V0 5065 aa7.43□□□□□ -1.22
PHTF1-202ENST00000369598 LUZP6Q538Z0 58 aa7.39□□□□□ -1.23
PHTF1-202ENST00000369598 HERC1Q15751 4861 aa7.33□□□□□ -1.24
PHTF1-202ENST00000369598 KRTAP4-1Q9BYQ7 146 aa7.31□□□□□ -1.24
PHTF1-202ENST00000369598 M0QZ58 72 aa7.3□□□□□ -1.24
PHTF1-202ENST00000369598 PLAC4Q8WY50 150 aa7.3□□□□□ -1.24
PHTF1-202ENST00000369598 MUC17Q685J3 4493 aa7.24□□□□□ -1.25
PHTF1-202ENST00000369598 HMCN2Q8NDA2 5059 aa7.21□□□□□ -1.26
PHTF1-202ENST00000369598 R4GN34 69 aa7.21□□□□□ -1.26
PHTF1-202ENST00000369598 MUC2Q02817 5179 aa7.13□□□□□ -1.27
PHTF1-202ENST00000369598 LORP23490 312 aaPredicted RBP7.12□□□□□ -1.27
PHTF1-202ENST00000369598 KRTAP19-2Q3LHN2 52 aa7.1□□□□□ -1.27
PHTF1-202ENST00000369598 CAMK2N1Q7Z7J9 78 aa6.99□□□□□ -1.29
PHTF1-202ENST00000369598 FLGP20930 4061 aaPredicted RBP6.91□□□□□ -1.3
PHTF1-202ENST00000369598 UBR4Q5T4S7 5183 aa6.9□□□□□ -1.3
PHTF1-202ENST00000369598 LCE2CQ5TA81 110 aa6.89□□□□□ -1.31
PHTF1-202ENST00000369598 RNF213Q63HN8 5207 aa6.87□□□□□ -1.31
PHTF1-202ENST00000369598 M0R2T5 61 aa6.8□□□□□ -1.32
PHTF1-202ENST00000369598 FAT4Q6V0I7 4981 aa6.78□□□□□ -1.32
PHTF1-202ENST00000369598 MT1HP80294 61 aa6.75□□□□□ -1.33
PHTF1-202ENST00000369598 PP632Q6XCG6 107 aa6.65□□□□□ -1.35
PHTF1-202ENST00000369598 TNP1P09430 55 aa6.56□□□□□ -1.36
PHTF1-202ENST00000369598 KRTAP10-10P60014 251 aa6.54□□□□□ -1.36
PHTF1-202ENST00000369598 KRTAP9-8Q9BYQ0 159 aa6.53□□□□□ -1.36
PHTF1-202ENST00000369598 MT2AP02795 61 aa6.52□□□□□ -1.36
PHTF1-202ENST00000369598 MT1FP04733 61 aa6.5□□□□□ -1.37
PHTF1-202ENST00000369598 SPRR2GQ9BYE4 73 aa6.47□□□□□ -1.37
PHTF1-202ENST00000369598 KRTAP19-1Q8IUB9 90 aa6.44□□□□□ -1.38
PHTF1-202ENST00000369598 LCE2AQ5TA79 106 aaPredicted RBP6.34□□□□□ -1.39
PHTF1-202ENST00000369598 SPRR5A0A1B0GTR4 108 aa6.33□□□□□ -1.4
PHTF1-202ENST00000369598 KRTAP9-3Q9BYQ3 159 aa6.28□□□□□ -1.4
PHTF1-202ENST00000369598 LCE3AQ5TA76 89 aa6.28□□□□□ -1.4
PHTF1-202ENST00000369598 KRTAP19-8Q3LI54 63 aa6.25□□□□□ -1.41
PHTF1-202ENST00000369598 PRO2289Q9P1D8 64 aa6.25□□□□□ -1.41
PHTF1-202ENST00000369598 MT1BP07438 61 aa6.17□□□□□ -1.42
PHTF1-202ENST00000369598 LCE2BO14633 110 aa6.09□□□□□ -1.43
PHTF1-202ENST00000369598 USH2AO75445 5202 aa6.04□□□□□ -1.44
PHTF1-202ENST00000369598 FSIP2Q5CZC0 6907 aa6.03□□□□□ -1.44
PHTF1-202ENST00000369598 KRTAP23-1A1A580 65 aa6.03□□□□□ -1.44
PHTF1-202ENST00000369598 KRTAP10-5P60370 271 aa6.02□□□□□ -1.45
PHTF1-202ENST00000369598 MT1XP80297 61 aa6.02□□□□□ -1.45
PHTF1-202ENST00000369598 INE1O15225 51 aa5.97□□□□□ -1.45
PHTF1-202ENST00000369598 KMT2DO14686 5537 aa5.94□□□□□ -1.46
PHTF1-202ENST00000369598 KRTAP12-3P60328 96 aa5.87□□□□□ -1.47
PHTF1-202ENST00000369598 KRTAP10-7P60409 375 aaPredicted RBP5.81□□□□□ -1.48
PHTF1-202ENST00000369598 KRTAP8-1Q8IUC2 63 aa5.81□□□□□ -1.48
PHTF1-202ENST00000369598 KRTAP10-12P60413 245 aa5.78□□□□□ -1.48
PHTF1-202ENST00000369598 LCE2DQ5TA82 110 aaPredicted RBP5.68□□□□□ -1.5
PHTF1-202ENST00000369598 SSPOA2VEC9 5147 aa5.65□□□□□ -1.51
PHTF1-202ENST00000369598 KRTAP19-6Q3LI70 58 aa5.64□□□□□ -1.51
PHTF1-202ENST00000369598 KRTAP4-8A0A0G2JLE6 195 aa5.57□□□□□ -1.52
PHTF1-202ENST00000369598 KRTAP4-8Q9BYQ9 185 aa5.57□□□□□ -1.52
PHTF1-202ENST00000369598 KRTAP19-5Q3LI72 72 aa5.53□□□□□ -1.52
PHTF1-202ENST00000369598 KRTAP4-7Q9BYR0 210 aa5.51□□□□□ -1.53
PHTF1-202ENST00000369598 KRTAP9-6A8MVA2 160 aa5.5□□□□□ -1.53
PHTF1-202ENST00000369598 LCE3CQ5T5A8 94 aa5.48□□□□□ -1.53
PHTF1-202ENST00000369598 KRTAP9-2Q9BYQ4 174 aa5.41□□□□□ -1.54
PHTF1-202ENST00000369598 FCGBPQ9Y6R7 5405 aaPredicted RBP5.39□□□□□ -1.55
PHTF1-202ENST00000369598 KRTAP19-7Q3SYF9 63 aa5.36□□□□□ -1.55
PHTF1-202ENST00000369598 DSTQ03001 7570 aaKnown RBP5.29□□□□□ -1.56
PHTF1-202ENST00000369598 CRCT1Q9UGL9 99 aa5.26□□□□□ -1.57
PHTF1-202ENST00000369598 OBSCNQ5VST9 7968 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms