RNA–Protein interactions for RNA: ENST00000368935.1

PRUNE1-203, Transcript of prune exopolyphosphatase 1, humanhuman

TSL 1 (best) BASIC

Gene PRUNE1, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-203ENST00000368935 LINC01554Q52M75 96 aa5.21□□□□□ -1.58
PRUNE1-203ENST00000368935 FAT3Q8TDW7 4589 aa5.2□□□□□ -1.58
PRUNE1-203ENST00000368935 LRP1Q07954 4544 aaKnown RBP5.18□□□□□ -1.58
PRUNE1-203ENST00000368935 TNXBP22105 4242 aa5.17□□□□□ -1.58
PRUNE1-203ENST00000368935 KMT2CQ8NEZ4 4911 aaKnown RBP5.17□□□□□ -1.58
PRUNE1-203ENST00000368935 KRTAP10-8P60410 259 aa5.16□□□□□ -1.58
PRUNE1-203ENST00000368935 RPL37P61927 97 aaKnown RBP5.15□□□□□ -1.59
PRUNE1-203ENST00000368935 Q5VSD8 79 aa5.14□□□□□ -1.59
PRUNE1-203ENST00000368935 HSPG2P98160 4391 aa5.13□□□□□ -1.59
PRUNE1-203ENST00000368935 DMBT1Q9UGM3 2413 aaPredicted RBP5.12□□□□□ -1.59
PRUNE1-203ENST00000368935 XP32Q5T750 250 aa5.12□□□□□ -1.59
PRUNE1-203ENST00000368935 K7ERS5 55 aa5.1□□□□□ -1.59
PRUNE1-203ENST00000368935 KRTAP10-6P60371 365 aaPredicted RBP5.08□□□□□ -1.6
PRUNE1-203ENST00000368935 KRTAP25-1Q3LHN0 102 aa5.07□□□□□ -1.6
PRUNE1-203ENST00000368935 S4R3F8 94 aa5.07□□□□□ -1.6
PRUNE1-203ENST00000368935 MYCBP2O75592 4640 aa5.07□□□□□ -1.6
PRUNE1-203ENST00000368935 KRTAP13-4Q3LI77 160 aa5.04□□□□□ -1.6
PRUNE1-203ENST00000368935 H3BS24 57 aa5.04□□□□□ -1.6
PRUNE1-203ENST00000368935 RYR1P21817 5038 aa5.03□□□□□ -1.6
PRUNE1-203ENST00000368935 KRTAP17-1Q9BYP8 105 aa5.01□□□□□ -1.61
PRUNE1-203ENST00000368935 A0A0D9SG42 100 aa5□□□□□ -1.61
PRUNE1-203ENST00000368935 MT1HL1P0DM35 61 aa5□□□□□ -1.61
PRUNE1-203ENST00000368935 ROMO1P60602 79 aa4.99□□□□□ -1.61
PRUNE1-203ENST00000368935 RYR3Q15413 4870 aa4.98□□□□□ -1.61
PRUNE1-203ENST00000368935 P0C880 135 aa4.98□□□□□ -1.61
PRUNE1-203ENST00000368935 CRIPTQ9P021 101 aa4.98□□□□□ -1.61
PRUNE1-203ENST00000368935 KIAA1109Q2LD37 5005 aa4.95□□□□□ -1.62
PRUNE1-203ENST00000368935 TPRXLQ17RH7 258 aa4.91□□□□□ -1.62
PRUNE1-203ENST00000368935 LPAP08519 4548 aa4.91□□□□□ -1.62
PRUNE1-203ENST00000368935 LRP2P98164 4655 aa4.9□□□□□ -1.62
PRUNE1-203ENST00000368935 KRTAP12-2P59991 146 aa4.88□□□□□ -1.63
PRUNE1-203ENST00000368935 KRTAP12-1P59990 96 aa4.84□□□□□ -1.63
PRUNE1-203ENST00000368935 SPINT4Q6UDR6 99 aa4.82□□□□□ -1.64
PRUNE1-203ENST00000368935 M0QZ58 72 aa4.82□□□□□ -1.64
PRUNE1-203ENST00000368935 EPPK1P58107 5090 aaKnown RBP4.81□□□□□ -1.64
PRUNE1-203ENST00000368935 C10orf95Q9H7T3 257 aa4.81□□□□□ -1.64
PRUNE1-203ENST00000368935 ABCA13Q86UQ4 5058 aa4.76□□□□□ -1.65
PRUNE1-203ENST00000368935 KRTAP4-5Q9BYR2 181 aa4.74□□□□□ -1.65
PRUNE1-203ENST00000368935 SEC61BP60468 96 aaKnown RBP4.72□□□□□ -1.65
PRUNE1-203ENST00000368935 R4GN34 69 aa4.7□□□□□ -1.66
PRUNE1-203ENST00000368935 MUC17Q685J3 4493 aa4.69□□□□□ -1.66
PRUNE1-203ENST00000368935 KRTAP4-1Q9BYQ7 146 aa4.65□□□□□ -1.66
PRUNE1-203ENST00000368935 KRTAP15-1Q3LI76 137 aa4.62□□□□□ -1.67
PRUNE1-203ENST00000368935 LOC100996750A0A140TA64 210 aa4.58□□□□□ -1.68
PRUNE1-203ENST00000368935 KRTAP19-2Q3LHN2 52 aa4.58□□□□□ -1.68
PRUNE1-203ENST00000368935 KRTAP4-6Q9BYQ5 205 aa4.58□□□□□ -1.68
PRUNE1-203ENST00000368935 HERC2O95714 4834 aa4.55□□□□□ -1.68
PRUNE1-203ENST00000368935 NDUFAF8A1L188 74 aa4.52□□□□□ -1.69
PRUNE1-203ENST00000368935 BIRC6Q9NR09 4857 aa4.5□□□□□ -1.69
PRUNE1-203ENST00000368935 CAMK2N1Q7Z7J9 78 aa4.47□□□□□ -1.69
PRUNE1-203ENST00000368935 FLGP20930 4061 aaPredicted RBP4.46□□□□□ -1.7
PRUNE1-203ENST00000368935 PCLOQ9Y6V0 5065 aa4.45□□□□□ -1.7
PRUNE1-203ENST00000368935 MUC2Q02817 5179 aa4.43□□□□□ -1.7
PRUNE1-203ENST00000368935 PLAC4Q8WY50 150 aa4.42□□□□□ -1.7
PRUNE1-203ENST00000368935 PP632Q6XCG6 107 aa4.41□□□□□ -1.7
PRUNE1-203ENST00000368935 HERC1Q15751 4861 aa4.35□□□□□ -1.71
PRUNE1-203ENST00000368935 KRTAP4-8Q9BYQ9 185 aa4.32□□□□□ -1.72
PRUNE1-203ENST00000368935 HMCN2Q8NDA2 5059 aa4.31□□□□□ -1.72
PRUNE1-203ENST00000368935 TNP1P09430 55 aa4.3□□□□□ -1.72
PRUNE1-203ENST00000368935 KRTAP19-1Q8IUB9 90 aa4.3□□□□□ -1.72
PRUNE1-203ENST00000368935 KRTAP4-12Q9BQ66 201 aa4.27□□□□□ -1.73
PRUNE1-203ENST00000368935 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.26□□□□□ -1.73
PRUNE1-203ENST00000368935 KRTAP9-2Q9BYQ4 174 aa4.26□□□□□ -1.73
PRUNE1-203ENST00000368935 FAT4Q6V0I7 4981 aa4.25□□□□□ -1.73
PRUNE1-203ENST00000368935 KRTAP23-1A1A580 65 aa4.25□□□□□ -1.73
PRUNE1-203ENST00000368935 SPRR2GQ9BYE4 73 aa4.25□□□□□ -1.73
PRUNE1-203ENST00000368935 KRTAP9-6A0A140TA67 174 aa4.23□□□□□ -1.73
PRUNE1-203ENST00000368935 LUZP6Q538Z0 58 aa4.22□□□□□ -1.73
PRUNE1-203ENST00000368935 M0R2T5 61 aa4.19□□□□□ -1.74
PRUNE1-203ENST00000368935 MT1HP80294 61 aa4.18□□□□□ -1.74
PRUNE1-203ENST00000368935 SPRR5A0A1B0GTR4 108 aa4.13□□□□□ -1.75
PRUNE1-203ENST00000368935 MT2AP02795 61 aa4.13□□□□□ -1.75
PRUNE1-203ENST00000368935 MT1FP04733 61 aa4.13□□□□□ -1.75
PRUNE1-203ENST00000368935 UBR4Q5T4S7 5183 aa4.12□□□□□ -1.75
PRUNE1-203ENST00000368935 KRTAP19-4Q3LI73 84 aa4.12□□□□□ -1.75
PRUNE1-203ENST00000368935 LCE4AQ5TA78 99 aa4.12□□□□□ -1.75
PRUNE1-203ENST00000368935 KRTAP10-10P60014 251 aa4.11□□□□□ -1.75
PRUNE1-203ENST00000368935 RNF213Q63HN8 5207 aa4.11□□□□□ -1.75
PRUNE1-203ENST00000368935 LCE3BQ5TA77 95 aa4.1□□□□□ -1.75
PRUNE1-203ENST00000368935 LCE3AQ5TA76 89 aa4.08□□□□□ -1.76
PRUNE1-203ENST00000368935 KRTAP9-8Q9BYQ0 159 aa4.08□□□□□ -1.76
PRUNE1-203ENST00000368935 KRTAP9-7A8MTY7 169 aa4.07□□□□□ -1.76
PRUNE1-203ENST00000368935 KRTAP9-9Q9BYP9 154 aa4.06□□□□□ -1.76
PRUNE1-203ENST00000368935 KRTAP9-4Q9BYQ2 154 aa4.06□□□□□ -1.76
PRUNE1-203ENST00000368935 A0A0A0MQY5 61 aa4.05□□□□□ -1.76
PRUNE1-203ENST00000368935 KRTAP19-8Q3LI54 63 aa4.05□□□□□ -1.76
PRUNE1-203ENST00000368935 MT1BP07438 61 aa4□□□□□ -1.77
PRUNE1-203ENST00000368935 KRTAP10-5P60370 271 aa3.98□□□□□ -1.77
PRUNE1-203ENST00000368935 MT1XP80297 61 aa3.98□□□□□ -1.77
PRUNE1-203ENST00000368935 KRTAP8-1Q8IUC2 63 aa3.97□□□□□ -1.77
PRUNE1-203ENST00000368935 KRTAP10-12P60413 245 aa3.93□□□□□ -1.78
PRUNE1-203ENST00000368935 KRTAP9-3Q9BYQ3 159 aa3.91□□□□□ -1.78
PRUNE1-203ENST00000368935 KRTAP4-8A0A0G2JLE6 195 aa3.9□□□□□ -1.78
PRUNE1-203ENST00000368935 KRTAP12-3P60328 96 aa3.88□□□□□ -1.79
PRUNE1-203ENST00000368935 KRTAP10-7P60409 375 aaPredicted RBP3.87□□□□□ -1.79
PRUNE1-203ENST00000368935 LCE1DQ5T752 114 aa3.86□□□□□ -1.79
PRUNE1-203ENST00000368935 PRO2289Q9P1D8 64 aa3.83□□□□□ -1.8
PRUNE1-203ENST00000368935 LCE5AQ5TCM9 118 aa3.75□□□□□ -1.81
PRUNE1-203ENST00000368935 KRTAP4-7Q9BYR0 210 aa3.74□□□□□ -1.81
PRUNE1-203ENST00000368935 KRTAP4-9Q9BYQ8 210 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms