RNA–Protein interactions for RNA: ENST00000368301.6

LMNA-207, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-207ENST00000368301 UQCR11O14957 56 aa9.39□□□□□ -0.91
LMNA-207ENST00000368301 ABCA13Q86UQ4 5058 aa9.38□□□□□ -0.91
LMNA-207ENST00000368301 LRP2P98164 4655 aa9.38□□□□□ -0.91
LMNA-207ENST00000368301 MIR22HGQ0VDD5 57 aa9.38□□□□□ -0.91
LMNA-207ENST00000368301 KRTAP4-5Q9BYR2 181 aa9.38□□□□□ -0.91
LMNA-207ENST00000368301 KTN1-AS1Q86SY8 53 aa9.26□□□□□ -0.93
LMNA-207ENST00000368301 KRTAP3-3Q9BYR6 98 aa9.24□□□□□ -0.93
LMNA-207ENST00000368301 H0YAA0 97 aa9.22□□□□□ -0.93
LMNA-207ENST00000368301 TPRXLQ17RH7 258 aa9.2□□□□□ -0.94
LMNA-207ENST00000368301 A0A1B0GU33 70 aa9.19□□□□□ -0.94
LMNA-207ENST00000368301 H1FX-AS1Q4G0G2 97 aa9.17□□□□□ -0.94
LMNA-207ENST00000368301 HERC2O95714 4834 aa9.14□□□□□ -0.95
LMNA-207ENST00000368301 S4R3F8 94 aa9.13□□□□□ -0.95
LMNA-207ENST00000368301 KRTAP10-6P60371 365 aaPredicted RBP9.07□□□□□ -0.96
LMNA-207ENST00000368301 ADM2Q7Z4H4 148 aa9.07□□□□□ -0.96
LMNA-207ENST00000368301 KRTAP3-2Q9BYR7 98 aa9.04□□□□□ -0.96
LMNA-207ENST00000368301 PRAC1Q96KF2 57 aa9.03□□□□□ -0.96
LMNA-207ENST00000368301 RBM12B-AS1Q9P1G2 102 aa8.99□□□□□ -0.97
LMNA-207ENST00000368301 BIRC6Q9NR09 4857 aa8.98□□□□□ -0.97
LMNA-207ENST00000368301 MUC17Q685J3 4493 aa8.97□□□□□ -0.97
LMNA-207ENST00000368301 KRTAP13-4Q3LI77 160 aa8.97□□□□□ -0.97
LMNA-207ENST00000368301 P0C880 135 aa8.95□□□□□ -0.98
LMNA-207ENST00000368301 J3QL48 77 aa8.95□□□□□ -0.98
LMNA-207ENST00000368301 KRTAP4-1Q9BYQ7 146 aa8.87□□□□□ -0.99
LMNA-207ENST00000368301 A0A0D9SG42 100 aa8.85□□□□□ -0.99
LMNA-207ENST00000368301 SEC61BP60468 96 aaKnown RBP8.83□□□□□ -1
LMNA-207ENST00000368301 CSAG1Q6PB30 78 aa8.82□□□□□ -1
LMNA-207ENST00000368301 HERC1Q15751 4861 aa8.75□□□□□ -1.01
LMNA-207ENST00000368301 MUC2Q02817 5179 aa8.74□□□□□ -1.01
LMNA-207ENST00000368301 PCLOQ9Y6V0 5065 aa8.73□□□□□ -1.01
LMNA-207ENST00000368301 K7ERS5 55 aa8.73□□□□□ -1.01
LMNA-207ENST00000368301 KRTAP19-2Q3LHN2 52 aa8.65□□□□□ -1.02
LMNA-207ENST00000368301 KRTAP12-2P59991 146 aa8.63□□□□□ -1.03
LMNA-207ENST00000368301 HMCN2Q8NDA2 5059 aa8.63□□□□□ -1.03
LMNA-207ENST00000368301 CRIPTQ9P021 101 aa8.6□□□□□ -1.03
LMNA-207ENST00000368301 KRTAP12-1P59990 96 aa8.57□□□□□ -1.04
LMNA-207ENST00000368301 ROMO1P60602 79 aa8.56□□□□□ -1.04
LMNA-207ENST00000368301 M0QZ58 72 aa8.55□□□□□ -1.04
LMNA-207ENST00000368301 LINC01554Q52M75 96 aa8.55□□□□□ -1.04
LMNA-207ENST00000368301 SPINT4Q6UDR6 99 aa8.54□□□□□ -1.04
LMNA-207ENST00000368301 KRTAP25-1Q3LHN0 102 aa8.53□□□□□ -1.04
LMNA-207ENST00000368301 LORP23490 312 aaPredicted RBP8.53□□□□□ -1.04
LMNA-207ENST00000368301 FLGP20930 4061 aaPredicted RBP8.51□□□□□ -1.05
LMNA-207ENST00000368301 R4GN34 69 aa8.45□□□□□ -1.06
LMNA-207ENST00000368301 FAT4Q6V0I7 4981 aa8.35□□□□□ -1.07
LMNA-207ENST00000368301 C10orf95Q9H7T3 257 aa8.34□□□□□ -1.08
LMNA-207ENST00000368301 H3BS24 57 aa8.28□□□□□ -1.08
LMNA-207ENST00000368301 UBR4Q5T4S7 5183 aa8.27□□□□□ -1.09
LMNA-207ENST00000368301 RNF213Q63HN8 5207 aa8.26□□□□□ -1.09
LMNA-207ENST00000368301 LCE2CQ5TA81 110 aa8.24□□□□□ -1.09
LMNA-207ENST00000368301 MT1HP80294 61 aa8.01□□□□□ -1.13
LMNA-207ENST00000368301 CAMK2N1Q7Z7J9 78 aa7.98□□□□□ -1.13
LMNA-207ENST00000368301 M0R2T5 61 aa7.97□□□□□ -1.13
LMNA-207ENST00000368301 KRTAP19-1Q8IUB9 90 aa7.87□□□□□ -1.15
LMNA-207ENST00000368301 SPRR2GQ9BYE4 73 aa7.85□□□□□ -1.15
LMNA-207ENST00000368301 MT1FP04733 61 aa7.83□□□□□ -1.16
LMNA-207ENST00000368301 MT2AP02795 61 aa7.83□□□□□ -1.16
LMNA-207ENST00000368301 KRTAP9-8Q9BYQ0 159 aa7.79□□□□□ -1.16
LMNA-207ENST00000368301 KRTAP10-10P60014 251 aa7.77□□□□□ -1.17
LMNA-207ENST00000368301 KRTAP15-1Q3LI76 137 aa7.73□□□□□ -1.17
LMNA-207ENST00000368301 PLAC4Q8WY50 150 aa7.68□□□□□ -1.18
LMNA-207ENST00000368301 TNP1P09430 55 aa7.63□□□□□ -1.19
LMNA-207ENST00000368301 PP632Q6XCG6 107 aa7.6□□□□□ -1.19
LMNA-207ENST00000368301 KRTAP19-8Q3LI54 63 aa7.54□□□□□ -1.2
LMNA-207ENST00000368301 MT1BP07438 61 aa7.51□□□□□ -1.21
LMNA-207ENST00000368301 KRTAP9-3Q9BYQ3 159 aa7.47□□□□□ -1.21
LMNA-207ENST00000368301 NDUFAF8A1L188 74 aa7.44□□□□□ -1.22
LMNA-207ENST00000368301 KRTAP23-1A1A580 65 aa7.42□□□□□ -1.22
LMNA-207ENST00000368301 KRTAP10-5P60370 271 aa7.38□□□□□ -1.23
LMNA-207ENST00000368301 MT1XP80297 61 aa7.38□□□□□ -1.23
LMNA-207ENST00000368301 LCE3AQ5TA76 89 aa7.35□□□□□ -1.23
LMNA-207ENST00000368301 LCE2AQ5TA79 106 aaPredicted RBP7.27□□□□□ -1.25
LMNA-207ENST00000368301 USH2AO75445 5202 aa7.25□□□□□ -1.25
LMNA-207ENST00000368301 LCE2BO14633 110 aa7.24□□□□□ -1.25
LMNA-207ENST00000368301 KRTAP10-7P60409 375 aaPredicted RBP7.18□□□□□ -1.26
LMNA-207ENST00000368301 KRTAP10-12P60413 245 aa7.12□□□□□ -1.27
LMNA-207ENST00000368301 KRTAP8-1Q8IUC2 63 aa7.11□□□□□ -1.27
LMNA-207ENST00000368301 SPRR5A0A1B0GTR4 108 aa7.06□□□□□ -1.28
LMNA-207ENST00000368301 PRO2289Q9P1D8 64 aa7.05□□□□□ -1.28
LMNA-207ENST00000368301 LUZP6Q538Z0 58 aa7.03□□□□□ -1.28
LMNA-207ENST00000368301 KMT2DO14686 5537 aa7□□□□□ -1.29
LMNA-207ENST00000368301 KRTAP12-3P60328 96 aa6.98□□□□□ -1.29
LMNA-207ENST00000368301 A0A0A0MQY5 61 aa6.88□□□□□ -1.31
LMNA-207ENST00000368301 KRTAP4-8A0A0G2JLE6 195 aa6.82□□□□□ -1.32
LMNA-207ENST00000368301 KRTAP4-8Q9BYQ9 185 aa6.82□□□□□ -1.32
LMNA-207ENST00000368301 KRTAP19-5Q3LI72 72 aa6.82□□□□□ -1.32
LMNA-207ENST00000368301 SSPOA2VEC9 5147 aa6.8□□□□□ -1.32
LMNA-207ENST00000368301 FSIP2Q5CZC0 6907 aa6.66□□□□□ -1.34
LMNA-207ENST00000368301 KRTAP19-7Q3SYF9 63 aa6.59□□□□□ -1.35
LMNA-207ENST00000368301 LCE3CQ5T5A8 94 aa6.55□□□□□ -1.36
LMNA-207ENST00000368301 KRTAP19-6Q3LI70 58 aa6.53□□□□□ -1.36
LMNA-207ENST00000368301 KRTAP4-7Q9BYR0 210 aa6.42□□□□□ -1.38
LMNA-207ENST00000368301 MT1EP04732 61 aa6.4□□□□□ -1.38
LMNA-207ENST00000368301 FCGBPQ9Y6R7 5405 aaPredicted RBP6.38□□□□□ -1.39
LMNA-207ENST00000368301 KRTAP9-6A8MVA2 160 aa6.36□□□□□ -1.39
LMNA-207ENST00000368301 MT1LQ93083 61 aa6.36□□□□□ -1.39
LMNA-207ENST00000368301 LCE2DQ5TA82 110 aaPredicted RBP6.28□□□□□ -1.4
LMNA-207ENST00000368301 MUC12Q9UKN1 5478 aa6.26□□□□□ -1.41
LMNA-207ENST00000368301 KRTAP19-4Q3LI73 84 aa6.13□□□□□ -1.43
LMNA-207ENST00000368301 KRTAP4-3Q9BYR4 195 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms