RNA–Protein interactions for RNA: ENST00000367976.3

CTGF-201, Transcript of connective tissue growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTGF, Length 2,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTGF-201ENST00000367976 LRP1Q07954 4544 aaKnown RBP11.16□□□□□ -0.62
CTGF-201ENST00000367976 FLG2Q5D862 2391 aaPredicted RBP11.15□□□□□ -0.62
CTGF-201ENST00000367976 KRTAP25-1Q3LHN0 102 aa11.06□□□□□ -0.64
CTGF-201ENST00000367976 K7ERS5 55 aa11.05□□□□□ -0.64
CTGF-201ENST00000367976 FAT3Q8TDW7 4589 aa11.03□□□□□ -0.64
CTGF-201ENST00000367976 TNXBP22105 4242 aa11□□□□□ -0.65
CTGF-201ENST00000367976 MYCBP2O75592 4640 aa10.98□□□□□ -0.65
CTGF-201ENST00000367976 KRTAP10-8P60410 259 aa10.96□□□□□ -0.65
CTGF-201ENST00000367976 KRTAP3-3Q9BYR6 98 aa10.96□□□□□ -0.65
CTGF-201ENST00000367976 RPL37P61927 97 aaKnown RBP10.95□□□□□ -0.66
CTGF-201ENST00000367976 KRTAP4-5Q9BYR2 181 aa10.95□□□□□ -0.66
CTGF-201ENST00000367976 KRTAP10-6P60371 365 aaPredicted RBP10.94□□□□□ -0.66
CTGF-201ENST00000367976 DMBT1Q9UGM3 2413 aaPredicted RBP10.86□□□□□ -0.67
CTGF-201ENST00000367976 XP32Q5T750 250 aa10.85□□□□□ -0.67
CTGF-201ENST00000367976 MT1HL1P0DM35 61 aa10.84□□□□□ -0.67
CTGF-201ENST00000367976 KRTAP3-2Q9BYR7 98 aa10.84□□□□□ -0.67
CTGF-201ENST00000367976 S4R3F8 94 aa10.84□□□□□ -0.67
CTGF-201ENST00000367976 KRTAP13-4Q3LI77 160 aa10.83□□□□□ -0.68
CTGF-201ENST00000367976 ROMO1P60602 79 aa10.83□□□□□ -0.68
CTGF-201ENST00000367976 CRIPTQ9P021 101 aa10.78□□□□□ -0.68
CTGF-201ENST00000367976 A0A0D9SG42 100 aa10.74□□□□□ -0.69
CTGF-201ENST00000367976 ABCA13Q86UQ4 5058 aa10.71□□□□□ -0.69
CTGF-201ENST00000367976 P0C880 135 aa10.68□□□□□ -0.7
CTGF-201ENST00000367976 BIRC6Q9NR09 4857 aa10.67□□□□□ -0.7
CTGF-201ENST00000367976 HERC2O95714 4834 aa10.58□□□□□ -0.72
CTGF-201ENST00000367976 H3BS24 57 aa10.56□□□□□ -0.72
CTGF-201ENST00000367976 TPRXLQ17RH7 258 aa10.52□□□□□ -0.72
CTGF-201ENST00000367976 KRTAP12-2P59991 146 aa10.5□□□□□ -0.73
CTGF-201ENST00000367976 J3QL48 77 aa10.49□□□□□ -0.73
CTGF-201ENST00000367976 LPAP08519 4548 aa10.45□□□□□ -0.74
CTGF-201ENST00000367976 KRTAP12-1P59990 96 aa10.43□□□□□ -0.74
CTGF-201ENST00000367976 C10orf95Q9H7T3 257 aa10.4□□□□□ -0.74
CTGF-201ENST00000367976 M0QZ58 72 aa10.38□□□□□ -0.75
CTGF-201ENST00000367976 SPINT4Q6UDR6 99 aa10.38□□□□□ -0.75
CTGF-201ENST00000367976 LRP2P98164 4655 aa10.33□□□□□ -0.76
CTGF-201ENST00000367976 PCLOQ9Y6V0 5065 aa10.32□□□□□ -0.76
CTGF-201ENST00000367976 KRTAP15-1Q3LI76 137 aa10.12□□□□□ -0.79
CTGF-201ENST00000367976 HERC1Q15751 4861 aa10.12□□□□□ -0.79
CTGF-201ENST00000367976 R4GN34 69 aa10.07□□□□□ -0.8
CTGF-201ENST00000367976 SEC61BP60468 96 aaKnown RBP9.99□□□□□ -0.81
CTGF-201ENST00000367976 KRTAP4-1Q9BYQ7 146 aa9.94□□□□□ -0.82
CTGF-201ENST00000367976 MUC17Q685J3 4493 aa9.93□□□□□ -0.82
CTGF-201ENST00000367976 HMCN2Q8NDA2 5059 aa9.92□□□□□ -0.82
CTGF-201ENST00000367976 NDUFAF8A1L188 74 aa9.9□□□□□ -0.82
CTGF-201ENST00000367976 LORP23490 312 aaPredicted RBP9.88□□□□□ -0.83
CTGF-201ENST00000367976 MUC2Q02817 5179 aa9.82□□□□□ -0.84
CTGF-201ENST00000367976 KRTAP19-2Q3LHN2 52 aa9.71□□□□□ -0.85
CTGF-201ENST00000367976 PLAC4Q8WY50 150 aa9.61□□□□□ -0.87
CTGF-201ENST00000367976 UBR4Q5T4S7 5183 aa9.58□□□□□ -0.88
CTGF-201ENST00000367976 CAMK2N1Q7Z7J9 78 aa9.57□□□□□ -0.88
CTGF-201ENST00000367976 PP632Q6XCG6 107 aa9.56□□□□□ -0.88
CTGF-201ENST00000367976 RNF213Q63HN8 5207 aa9.5□□□□□ -0.89
CTGF-201ENST00000367976 FLGP20930 4061 aaPredicted RBP9.46□□□□□ -0.9
CTGF-201ENST00000367976 FAT4Q6V0I7 4981 aa9.38□□□□□ -0.91
CTGF-201ENST00000367976 LCE2CQ5TA81 110 aa9.32□□□□□ -0.92
CTGF-201ENST00000367976 TNP1P09430 55 aa9.26□□□□□ -0.93
CTGF-201ENST00000367976 KRTAP23-1A1A580 65 aa9.22□□□□□ -0.93
CTGF-201ENST00000367976 LUZP6Q538Z0 58 aa9.22□□□□□ -0.93
CTGF-201ENST00000367976 MT1HP80294 61 aa9.14□□□□□ -0.95
CTGF-201ENST00000367976 M0R2T5 61 aa9.13□□□□□ -0.95
CTGF-201ENST00000367976 SPRR2GQ9BYE4 73 aa9.03□□□□□ -0.96
CTGF-201ENST00000367976 SPRR5A0A1B0GTR4 108 aa8.97□□□□□ -0.97
CTGF-201ENST00000367976 KRTAP19-1Q8IUB9 90 aa8.96□□□□□ -0.98
CTGF-201ENST00000367976 A0A0A0MQY5 61 aa8.85□□□□□ -0.99
CTGF-201ENST00000367976 MT2AP02795 61 aa8.81□□□□□ -1
CTGF-201ENST00000367976 MT1FP04733 61 aa8.81□□□□□ -1
CTGF-201ENST00000367976 KRTAP9-8Q9BYQ0 159 aa8.8□□□□□ -1
CTGF-201ENST00000367976 KRTAP10-10P60014 251 aa8.77□□□□□ -1
CTGF-201ENST00000367976 LCE3AQ5TA76 89 aa8.72□□□□□ -1.01
CTGF-201ENST00000367976 KRTAP19-8Q3LI54 63 aa8.6□□□□□ -1.03
CTGF-201ENST00000367976 LCE2AQ5TA79 106 aaPredicted RBP8.6□□□□□ -1.03
CTGF-201ENST00000367976 KRTAP8-1Q8IUC2 63 aa8.54□□□□□ -1.04
CTGF-201ENST00000367976 MT1BP07438 61 aa8.46□□□□□ -1.05
CTGF-201ENST00000367976 KRTAP10-5P60370 271 aa8.46□□□□□ -1.05
CTGF-201ENST00000367976 KRTAP9-3Q9BYQ3 159 aa8.46□□□□□ -1.05
CTGF-201ENST00000367976 MT1XP80297 61 aa8.45□□□□□ -1.06
CTGF-201ENST00000367976 KRTAP10-12P60413 245 aa8.35□□□□□ -1.07
CTGF-201ENST00000367976 KRTAP12-3P60328 96 aa8.31□□□□□ -1.08
CTGF-201ENST00000367976 LCE2BO14633 110 aa8.28□□□□□ -1.08
CTGF-201ENST00000367976 KRTAP10-7P60409 375 aaPredicted RBP8.21□□□□□ -1.1
CTGF-201ENST00000367976 USH2AO75445 5202 aa8.19□□□□□ -1.1
CTGF-201ENST00000367976 PRO2289Q9P1D8 64 aa8.13□□□□□ -1.11
CTGF-201ENST00000367976 INE1O15225 51 aa8.02□□□□□ -1.13
CTGF-201ENST00000367976 KRTAP19-5Q3LI72 72 aa7.9□□□□□ -1.15
CTGF-201ENST00000367976 FSIP2Q5CZC0 6907 aa7.87□□□□□ -1.15
CTGF-201ENST00000367976 LCE3CQ5T5A8 94 aa7.84□□□□□ -1.15
CTGF-201ENST00000367976 SSPOA2VEC9 5147 aa7.79□□□□□ -1.16
CTGF-201ENST00000367976 KMT2DO14686 5537 aa7.68□□□□□ -1.18
CTGF-201ENST00000367976 KRTAP4-8A0A0G2JLE6 195 aa7.64□□□□□ -1.19
CTGF-201ENST00000367976 LCE2DQ5TA82 110 aaPredicted RBP7.64□□□□□ -1.19
CTGF-201ENST00000367976 KRTAP4-8Q9BYQ9 185 aa7.64□□□□□ -1.19
CTGF-201ENST00000367976 KRTAP19-6Q3LI70 58 aa7.58□□□□□ -1.2
CTGF-201ENST00000367976 KRTAP9-6A8MVA2 160 aa7.55□□□□□ -1.2
CTGF-201ENST00000367976 KRTAP19-7Q3SYF9 63 aa7.52□□□□□ -1.2
CTGF-201ENST00000367976 KRTAP19-4Q3LI73 84 aa7.44□□□□□ -1.22
CTGF-201ENST00000367976 KRTAP9-2Q9BYQ4 174 aa7.43□□□□□ -1.22
CTGF-201ENST00000367976 FCGBPQ9Y6R7 5405 aaPredicted RBP7.41□□□□□ -1.22
CTGF-201ENST00000367976 KRTAP2-3P0C7H8 128 aa7.38□□□□□ -1.23
CTGF-201ENST00000367976 KRTAP2-4Q9BYR9 128 aa7.38□□□□□ -1.23
CTGF-201ENST00000367976 KRTAP2-1Q9BYU5 128 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms