RNA–Protein interactions for RNA: ENST00000367387.5

LHX9-201, Transcript of LIM homeobox 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LHX9, Length 7,836 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9-201ENST00000367387 LCE3AQ5TA76 89 aa3.4□□□□□ -1.87
LHX9-201ENST00000367387 LORP23490 312 aaPredicted RBP3.38□□□□□ -1.87
LHX9-201ENST00000367387 CMYA5Q8N3K9 4069 aa3.38□□□□□ -1.87
LHX9-201ENST00000367387 KRTAP8-1Q8IUC2 63 aa3.38□□□□□ -1.87
LHX9-201ENST00000367387 LYSTQ99698 3801 aa3.37□□□□□ -1.87
LHX9-201ENST00000367387 ALMS1Q8TCU4 4167 aa3.37□□□□□ -1.87
LHX9-201ENST00000367387 HUWE1Q7Z6Z7 4374 aaKnown RBP3.35□□□□□ -1.87
LHX9-201ENST00000367387 KRTAP3-2Q9BYR7 98 aa3.3□□□□□ -1.88
LHX9-201ENST00000367387 KRTAP3-3Q9BYR6 98 aa3.29□□□□□ -1.88
LHX9-201ENST00000367387 MT1HL1P0DM35 61 aa3.28□□□□□ -1.89
LHX9-201ENST00000367387 ANK2Q01484 3957 aa3.27□□□□□ -1.89
LHX9-201ENST00000367387 KRTAP4-5Q9BYR2 181 aa3.27□□□□□ -1.89
LHX9-201ENST00000367387 KMT2AQ03164 3969 aa3.26□□□□□ -1.89
LHX9-201ENST00000367387 RYR2Q92736 4967 aa3.24□□□□□ -1.89
LHX9-201ENST00000367387 UBR4Q5T4S7 5183 aa3.23□□□□□ -1.89
LHX9-201ENST00000367387 EPPK1P58107 5090 aaKnown RBP3.21□□□□□ -1.9
LHX9-201ENST00000367387 DNAH7Q8WXX0 4024 aa3.21□□□□□ -1.9
LHX9-201ENST00000367387 KRTAP10-7P60409 375 aaPredicted RBP3.2□□□□□ -1.9
LHX9-201ENST00000367387 PRKDCP78527 4128 aaKnown RBP3.19□□□□□ -1.9
LHX9-201ENST00000367387 VPS13BQ7Z7G8 4022 aa3.15□□□□□ -1.91
LHX9-201ENST00000367387 DNAH9Q9NYC9 4486 aa3.14□□□□□ -1.91
LHX9-201ENST00000367387 DNAH2Q9P225 4427 aa3.13□□□□□ -1.91
LHX9-201ENST00000367387 ABCA13Q86UQ4 5058 aa3.13□□□□□ -1.91
LHX9-201ENST00000367387 DNAH3Q8TD57 4116 aa3.13□□□□□ -1.91
LHX9-201ENST00000367387 SPRR2FQ96RM1 72 aa3.13□□□□□ -1.91
LHX9-201ENST00000367387 DNHD1Q96M86 4753 aa3.11□□□□□ -1.91
LHX9-201ENST00000367387 DNAH1Q9P2D7 4330 aa3.1□□□□□ -1.91
LHX9-201ENST00000367387 KIAA1109Q2LD37 5005 aa3.09□□□□□ -1.91
LHX9-201ENST00000367387 KRTAP17-1Q9BYP8 105 aa3.09□□□□□ -1.91
LHX9-201ENST00000367387 KRTAP10-4P60372 401 aaPredicted RBP3.08□□□□□ -1.92
LHX9-201ENST00000367387 HMCN2Q8NDA2 5059 aa3.02□□□□□ -1.93
LHX9-201ENST00000367387 KRTAP19-4Q3LI73 84 aa3.01□□□□□ -1.93
LHX9-201ENST00000367387 DNAH10Q8IVF4 4471 aa3.01□□□□□ -1.93
LHX9-201ENST00000367387 DNAH6Q9C0G6 4158 aa3.01□□□□□ -1.93
LHX9-201ENST00000367387 RNF213Q63HN8 5207 aa3□□□□□ -1.93
LHX9-201ENST00000367387 HECTD4Q9Y4D8 3996 aa3□□□□□ -1.93
LHX9-201ENST00000367387 KRTAP19-5Q3LI72 72 aa3□□□□□ -1.93
LHX9-201ENST00000367387 FLGP20930 4061 aaPredicted RBP2.97□□□□□ -1.93
LHX9-201ENST00000367387 LCE3CQ5T5A8 94 aa2.96□□□□□ -1.94
LHX9-201ENST00000367387 STARD9Q9P2P6 4700 aa2.95□□□□□ -1.94
LHX9-201ENST00000367387 FAT2Q9NYQ8 4349 aa2.95□□□□□ -1.94
LHX9-201ENST00000367387 SPRR2EP22531 72 aa2.95□□□□□ -1.94
LHX9-201ENST00000367387 SPRR2BP35325 72 aa2.95□□□□□ -1.94
LHX9-201ENST00000367387 SPRR2AP35326 72 aa2.95□□□□□ -1.94
LHX9-201ENST00000367387 LCE3BQ5TA77 95 aa2.95□□□□□ -1.94
LHX9-201ENST00000367387 MT1HP80294 61 aa2.94□□□□□ -1.94
LHX9-201ENST00000367387 SPRR2GQ9BYE4 73 aa2.93□□□□□ -1.94
LHX9-201ENST00000367387 RYR3Q15413 4870 aa2.93□□□□□ -1.94
LHX9-201ENST00000367387 PLECQ15149 4684 aaKnown RBP2.9□□□□□ -1.94
LHX9-201ENST00000367387 MT2AP02795 61 aa2.9□□□□□ -1.95
LHX9-201ENST00000367387 HERC2O95714 4834 aa2.9□□□□□ -1.95
LHX9-201ENST00000367387 VPS13DQ5THJ4 4388 aa2.89□□□□□ -1.95
LHX9-201ENST00000367387 KMT2CQ8NEZ4 4911 aaKnown RBP2.87□□□□□ -1.95
LHX9-201ENST00000367387 KRTAP4-1Q9BYQ7 146 aa2.87□□□□□ -1.95
LHX9-201ENST00000367387 DYNC2H1Q8NCM8 4307 aaKnown RBP2.86□□□□□ -1.95
LHX9-201ENST00000367387 PKHD1P08F94 4074 aa2.86□□□□□ -1.95
LHX9-201ENST00000367387 KRTAP12-4P60329 112 aa2.85□□□□□ -1.95
LHX9-201ENST00000367387 BIRC6Q9NR09 4857 aa2.84□□□□□ -1.95
LHX9-201ENST00000367387 SPRR2DP22532 72 aa2.84□□□□□ -1.95
LHX9-201ENST00000367387 MT1FP04733 61 aa2.83□□□□□ -1.96
LHX9-201ENST00000367387 LCE2BO14633 110 aa2.81□□□□□ -1.96
LHX9-201ENST00000367387 USH2AO75445 5202 aa2.81□□□□□ -1.96
LHX9-201ENST00000367387 DNAH17Q9UFH2 4485 aa2.81□□□□□ -1.96
LHX9-201ENST00000367387 DNAH11Q96DT5 4516 aa2.81□□□□□ -1.96
LHX9-201ENST00000367387 MT1GP13640 62 aa2.79□□□□□ -1.96
LHX9-201ENST00000367387 LCE2DQ5TA82 110 aaPredicted RBP2.79□□□□□ -1.96
LHX9-201ENST00000367387 DNAH8Q96JB1 4490 aa2.77□□□□□ -1.97
LHX9-201ENST00000367387 LRP1BQ9NZR2 4599 aa2.77□□□□□ -1.97
LHX9-201ENST00000367387 DNAH5Q8TE73 4624 aa2.75□□□□□ -1.97
LHX9-201ENST00000367387 SSPOA2VEC9 5147 aa2.75□□□□□ -1.97
LHX9-201ENST00000367387 FAT4Q6V0I7 4981 aa2.75□□□□□ -1.97
LHX9-201ENST00000367387 MT3P25713 68 aa2.74□□□□□ -1.97
LHX9-201ENST00000367387 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
LHX9-201ENST00000367387 HSPG2P98160 4391 aa2.74□□□□□ -1.97
LHX9-201ENST00000367387 FAT1Q14517 4588 aa2.73□□□□□ -1.97
LHX9-201ENST00000367387 SPRR5A0A1B0GTR4 108 aa2.71□□□□□ -1.98
LHX9-201ENST00000367387 PKHD1L1Q86WI1 4243 aa2.68□□□□□ -1.98
LHX9-201ENST00000367387 LCE2CQ5TA81 110 aa2.68□□□□□ -1.98
LHX9-201ENST00000367387 LPAP08519 4548 aa2.68□□□□□ -1.98
LHX9-201ENST00000367387 LCE3EQ5T5B0 92 aa2.67□□□□□ -1.98
LHX9-201ENST00000367387 SACSQ9NZJ4 4579 aa2.67□□□□□ -1.98
LHX9-201ENST00000367387 PKD1P98161 4303 aa2.66□□□□□ -1.98
LHX9-201ENST00000367387 KRTAP19-8Q3LI54 63 aa2.65□□□□□ -1.98
LHX9-201ENST00000367387 FAT3Q8TDW7 4589 aa2.63□□□□□ -1.99
LHX9-201ENST00000367387 MT4P47944 62 aa2.62□□□□□ -1.99
LHX9-201ENST00000367387 KRTAP4-8A0A0G2JLE6 195 aa2.6□□□□□ -1.99
LHX9-201ENST00000367387 KRTAP4-8Q9BYQ9 185 aa2.6□□□□□ -1.99
LHX9-201ENST00000367387 TNXBP22105 4242 aa2.59□□□□□ -1.99
LHX9-201ENST00000367387 MUC2Q02817 5179 aa2.58□□□□□ -2
LHX9-201ENST00000367387 MT1XP80297 61 aa2.58□□□□□ -2
LHX9-201ENST00000367387 HERC1Q15751 4861 aa2.57□□□□□ -2
LHX9-201ENST00000367387 LCE1BQ5T7P3 118 aa2.57□□□□□ -2
LHX9-201ENST00000367387 KRTAP19-1Q8IUB9 90 aa2.56□□□□□ -2
LHX9-201ENST00000367387 DYNC1H1Q14204 4646 aaKnown RBP2.56□□□□□ -2
LHX9-201ENST00000367387 LRP1Q07954 4544 aaKnown RBP2.55□□□□□ -2
LHX9-201ENST00000367387 APOBP04114 4563 aaKnown RBP2.55□□□□□ -2
LHX9-201ENST00000367387 LCE1DQ5T752 114 aa2.53□□□□□ -2
LHX9-201ENST00000367387 PRM1P04553 51 aa2.53□□□□□ -2.01
LHX9-201ENST00000367387 KRTAP9-2Q9BYQ4 174 aa2.52□□□□□ -2.01
LHX9-201ENST00000367387 KRTAP19-3Q7Z4W3 81 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms