RNA–Protein interactions for RNA: ENST00000367186.7

SCAF8-202, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-202ENST00000367186 PRO2289Q9P1D8 64 aa5.19□□□□□ -1.58
SCAF8-202ENST00000367186 VPS13DQ5THJ4 4388 aa5.18□□□□□ -1.58
SCAF8-202ENST00000367186 KMT2CQ8NEZ4 4911 aaKnown RBP5.13□□□□□ -1.59
SCAF8-202ENST00000367186 HYDINQ4G0P3 5121 aa5.13□□□□□ -1.59
SCAF8-202ENST00000367186 DNAH2Q9P225 4427 aa5.13□□□□□ -1.59
SCAF8-202ENST00000367186 KRTAP12-1P59990 96 aa5.11□□□□□ -1.59
SCAF8-202ENST00000367186 KRTAP3-1Q9BYR8 98 aa5.07□□□□□ -1.6
SCAF8-202ENST00000367186 FAT2Q9NYQ8 4349 aa5.06□□□□□ -1.6
SCAF8-202ENST00000367186 SACSQ9NZJ4 4579 aa5.06□□□□□ -1.6
SCAF8-202ENST00000367186 KRTAP13-4Q3LI77 160 aa5.04□□□□□ -1.6
SCAF8-202ENST00000367186 HECTD4Q9Y4D8 3996 aa5.02□□□□□ -1.61
SCAF8-202ENST00000367186 ALMS1Q8TCU4 4167 aa5.02□□□□□ -1.61
SCAF8-202ENST00000367186 DNAH17Q9UFH2 4485 aa5.01□□□□□ -1.61
SCAF8-202ENST00000367186 DNAH6Q9C0G6 4158 aa5□□□□□ -1.61
SCAF8-202ENST00000367186 RYR3Q15413 4870 aa4.99□□□□□ -1.61
SCAF8-202ENST00000367186 DNAH11Q96DT5 4516 aa4.98□□□□□ -1.61
SCAF8-202ENST00000367186 PKHD1P08F94 4074 aa4.96□□□□□ -1.62
SCAF8-202ENST00000367186 RYR2Q92736 4967 aa4.96□□□□□ -1.62
SCAF8-202ENST00000367186 DNAH5Q8TE73 4624 aa4.95□□□□□ -1.62
SCAF8-202ENST00000367186 KRTAP15-1Q3LI76 137 aa4.94□□□□□ -1.62
SCAF8-202ENST00000367186 KRTAP10-6P60371 365 aaPredicted RBP4.93□□□□□ -1.62
SCAF8-202ENST00000367186 PKD1P98161 4303 aa4.93□□□□□ -1.62
SCAF8-202ENST00000367186 DNAH8Q96JB1 4490 aa4.9□□□□□ -1.62
SCAF8-202ENST00000367186 LRP1BQ9NZR2 4599 aa4.86□□□□□ -1.63
SCAF8-202ENST00000367186 DYNC1H1Q14204 4646 aaKnown RBP4.85□□□□□ -1.63
SCAF8-202ENST00000367186 CRCT1Q9UGL9 99 aa4.85□□□□□ -1.63
SCAF8-202ENST00000367186 FAT1Q14517 4588 aa4.79□□□□□ -1.64
SCAF8-202ENST00000367186 VPS13BQ7Z7G8 4022 aa4.78□□□□□ -1.64
SCAF8-202ENST00000367186 EPPK1P58107 5090 aaKnown RBP4.77□□□□□ -1.65
SCAF8-202ENST00000367186 APOBP04114 4563 aaKnown RBP4.76□□□□□ -1.65
SCAF8-202ENST00000367186 KIAA1109Q2LD37 5005 aa4.73□□□□□ -1.65
SCAF8-202ENST00000367186 KRTAP3-2Q9BYR7 98 aa4.72□□□□□ -1.65
SCAF8-202ENST00000367186 KRTAP3-3Q9BYR6 98 aa4.69□□□□□ -1.66
SCAF8-202ENST00000367186 HSPG2P98160 4391 aa4.67□□□□□ -1.66
SCAF8-202ENST00000367186 MT1HL1P0DM35 61 aa4.67□□□□□ -1.66
SCAF8-202ENST00000367186 RYR1P21817 5038 aa4.66□□□□□ -1.66
SCAF8-202ENST00000367186 KRTAP10-12P60413 245 aa4.64□□□□□ -1.67
SCAF8-202ENST00000367186 KRTAP17-1Q9BYP8 105 aa4.62□□□□□ -1.67
SCAF8-202ENST00000367186 KRTAP4-5Q9BYR2 181 aa4.61□□□□□ -1.67
SCAF8-202ENST00000367186 LRP1Q07954 4544 aaKnown RBP4.61□□□□□ -1.67
SCAF8-202ENST00000367186 KRTAP10-4P60372 401 aaPredicted RBP4.6□□□□□ -1.67
SCAF8-202ENST00000367186 MYCBP2O75592 4640 aa4.59□□□□□ -1.67
SCAF8-202ENST00000367186 KRTAP12-3P60328 96 aa4.57□□□□□ -1.68
SCAF8-202ENST00000367186 LORP23490 312 aaPredicted RBP4.55□□□□□ -1.68
SCAF8-202ENST00000367186 INE1O15225 51 aa4.55□□□□□ -1.68
SCAF8-202ENST00000367186 PCLOQ9Y6V0 5065 aa4.54□□□□□ -1.68
SCAF8-202ENST00000367186 PKHD1L1Q86WI1 4243 aa4.53□□□□□ -1.68
SCAF8-202ENST00000367186 LCE3AQ5TA76 89 aa4.51□□□□□ -1.69
SCAF8-202ENST00000367186 ABCA13Q86UQ4 5058 aa4.51□□□□□ -1.69
SCAF8-202ENST00000367186 BIRC6Q9NR09 4857 aa4.51□□□□□ -1.69
SCAF8-202ENST00000367186 FAT3Q8TDW7 4589 aa4.48□□□□□ -1.69
SCAF8-202ENST00000367186 HERC2O95714 4834 aa4.46□□□□□ -1.7
SCAF8-202ENST00000367186 TNXBP22105 4242 aa4.46□□□□□ -1.7
SCAF8-202ENST00000367186 KRTAP10-5P60370 271 aa4.45□□□□□ -1.7
SCAF8-202ENST00000367186 MUC2Q02817 5179 aa4.37□□□□□ -1.71
SCAF8-202ENST00000367186 HERC1Q15751 4861 aa4.37□□□□□ -1.71
SCAF8-202ENST00000367186 LPAP08519 4548 aa4.35□□□□□ -1.71
SCAF8-202ENST00000367186 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
SCAF8-202ENST00000367186 KRTAP8-1Q8IUC2 63 aa4.27□□□□□ -1.73
SCAF8-202ENST00000367186 LRP2P98164 4655 aa4.26□□□□□ -1.73
SCAF8-202ENST00000367186 KRTAP23-1A1A580 65 aa4.23□□□□□ -1.73
SCAF8-202ENST00000367186 RNF213Q63HN8 5207 aa4.21□□□□□ -1.74
SCAF8-202ENST00000367186 KRTAP4-1Q9BYQ7 146 aa4.21□□□□□ -1.74
SCAF8-202ENST00000367186 HMCN2Q8NDA2 5059 aa4.14□□□□□ -1.75
SCAF8-202ENST00000367186 UBR4Q5T4S7 5183 aa4.09□□□□□ -1.75
SCAF8-202ENST00000367186 MT2AP02795 61 aa4.07□□□□□ -1.76
SCAF8-202ENST00000367186 FAT4Q6V0I7 4981 aa4.07□□□□□ -1.76
SCAF8-202ENST00000367186 MT1HP80294 61 aa4.05□□□□□ -1.76
SCAF8-202ENST00000367186 SPRR2FQ96RM1 72 aa4.02□□□□□ -1.77
SCAF8-202ENST00000367186 KRTAP19-5Q3LI72 72 aa4.01□□□□□ -1.77
SCAF8-202ENST00000367186 MT1FP04733 61 aa4□□□□□ -1.77
SCAF8-202ENST00000367186 MUC17Q685J3 4493 aa3.99□□□□□ -1.77
SCAF8-202ENST00000367186 SPRR2GQ9BYE4 73 aa3.97□□□□□ -1.77
SCAF8-202ENST00000367186 OBSCNQ5VST9 7968 aa3.96□□□□□ -1.78
SCAF8-202ENST00000367186 KRTAP10-7P60409 375 aaPredicted RBP3.94□□□□□ -1.78
SCAF8-202ENST00000367186 LCE3CQ5T5A8 94 aa3.91□□□□□ -1.78
SCAF8-202ENST00000367186 KRTAP19-2Q3LHN2 52 aa3.83□□□□□ -1.8
SCAF8-202ENST00000367186 FSIP2Q5CZC0 6907 aa3.82□□□□□ -1.8
SCAF8-202ENST00000367186 LCE3BQ5TA77 95 aa3.81□□□□□ -1.8
SCAF8-202ENST00000367186 FLGP20930 4061 aaPredicted RBP3.8□□□□□ -1.8
SCAF8-202ENST00000367186 KRTAP19-1Q8IUB9 90 aa3.78□□□□□ -1.8
SCAF8-202ENST00000367186 LCE2CQ5TA81 110 aa3.77□□□□□ -1.81
SCAF8-202ENST00000367186 KRTAP12-4P60329 112 aa3.76□□□□□ -1.81
SCAF8-202ENST00000367186 MT1GP13640 62 aa3.73□□□□□ -1.81
SCAF8-202ENST00000367186 KRTAP4-8A0A0G2JLE6 195 aa3.73□□□□□ -1.81
SCAF8-202ENST00000367186 KRTAP4-8Q9BYQ9 185 aa3.73□□□□□ -1.81
SCAF8-202ENST00000367186 MT1XP80297 61 aa3.66□□□□□ -1.82
SCAF8-202ENST00000367186 USH2AO75445 5202 aa3.66□□□□□ -1.82
SCAF8-202ENST00000367186 SPRR2EP22531 72 aa3.65□□□□□ -1.83
SCAF8-202ENST00000367186 SPRR2BP35325 72 aa3.65□□□□□ -1.83
SCAF8-202ENST00000367186 SPRR2AP35326 72 aa3.65□□□□□ -1.83
SCAF8-202ENST00000367186 KRTAP19-8Q3LI54 63 aa3.63□□□□□ -1.83
SCAF8-202ENST00000367186 MT1BP07438 61 aa3.6□□□□□ -1.83
SCAF8-202ENST00000367186 SPRR5A0A1B0GTR4 108 aa3.59□□□□□ -1.83
SCAF8-202ENST00000367186 KRTAP4-7Q9BYR0 210 aa3.57□□□□□ -1.84
SCAF8-202ENST00000367186 LCE2AQ5TA79 106 aaPredicted RBP3.56□□□□□ -1.84
SCAF8-202ENST00000367186 KRTAP9-8Q9BYQ0 159 aa3.55□□□□□ -1.84
SCAF8-202ENST00000367186 LCE3DQ9BYE3 92 aa3.54□□□□□ -1.84
SCAF8-202ENST00000367186 DSTQ03001 7570 aaKnown RBP3.53□□□□□ -1.85
SCAF8-202ENST00000367186 KRTAP19-4Q3LI73 84 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms