RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 MT-ATP8P03928 68 aa9.13□□□□□ -0.95
H3F3A-204ENST00000366816 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.12□□□□□ -0.95
H3F3A-204ENST00000366816 IMUPQ9GZP8 106 aa9.07□□□□□ -0.96
H3F3A-204ENST00000366816 FCGBPQ9Y6R7 5405 aaPredicted RBP9.06□□□□□ -0.96
H3F3A-204ENST00000366816 KRTAP9-7A8MTY7 169 aa9.05□□□□□ -0.96
H3F3A-204ENST00000366816 H3BPC8 53 aa9.04□□□□□ -0.96
H3F3A-204ENST00000366816 A8MUN3 132 aa9.03□□□□□ -0.96
H3F3A-204ENST00000366816 NDUFC1O43677 76 aa9.02□□□□□ -0.97
H3F3A-204ENST00000366816 KRTAP19-6Q3LI70 58 aa9□□□□□ -0.97
H3F3A-204ENST00000366816 SPRR2GQ9BYE4 73 aa8.94□□□□□ -0.98
H3F3A-204ENST00000366816 TRAV7A0A075B6U4 112 aa8.91□□□□□ -0.98
H3F3A-204ENST00000366816 SMIM20Q8N5G0 67 aa8.89□□□□□ -0.99
H3F3A-204ENST00000366816 DMAC1Q96GE9 116 aa8.88□□□□□ -0.99
H3F3A-204ENST00000366816 MT1BP07438 61 aa8.87□□□□□ -0.99
H3F3A-204ENST00000366816 H0YAA0 97 aa8.85□□□□□ -0.99
H3F3A-204ENST00000366816 KRTAP19-8Q3LI54 63 aa8.85□□□□□ -0.99
H3F3A-204ENST00000366816 Q5VV11 94 aa8.85□□□□□ -0.99
H3F3A-204ENST00000366816 ADM2Q7Z4H4 148 aa8.84□□□□□ -0.99
H3F3A-204ENST00000366816 CRIPTQ9P021 101 aa8.82□□□□□ -1
H3F3A-204ENST00000366816 SNURFQ9Y675 71 aa8.77□□□□□ -1.01
H3F3A-204ENST00000366816 MACF1Q9UPN3 7388 aaKnown RBP8.75□□□□□ -1.01
H3F3A-204ENST00000366816 ACYP2P14621 99 aa8.71□□□□□ -1.02
H3F3A-204ENST00000366816 P0C880 135 aa8.69□□□□□ -1.02
H3F3A-204ENST00000366816 A6NN06 94 aa8.68□□□□□ -1.02
H3F3A-204ENST00000366816 C20orf197Q8N268 126 aa8.68□□□□□ -1.02
H3F3A-204ENST00000366816 SERP2Q8N6R1 65 aa8.68□□□□□ -1.02
H3F3A-204ENST00000366816 SYNE2Q8WXH0 6885 aaKnown RBP8.65□□□□□ -1.03
H3F3A-204ENST00000366816 KRTAP3-2Q9BYR7 98 aa8.63□□□□□ -1.03
H3F3A-204ENST00000366816 KRTAP10-5P60370 271 aa8.6□□□□□ -1.03
H3F3A-204ENST00000366816 R4GN34 69 aa8.57□□□□□ -1.04
H3F3A-204ENST00000366816 CHKB-CPT1BH3BT56 60 aa8.56□□□□□ -1.04
H3F3A-204ENST00000366816 SPANXA2-OT1Q8N9U9 137 aa8.55□□□□□ -1.04
H3F3A-204ENST00000366816 M0QZ58 72 aa8.53□□□□□ -1.04
H3F3A-204ENST00000366816 SPTSSBQ8NFR3 76 aa8.53□□□□□ -1.04
H3F3A-204ENST00000366816 KRTAP6-3Q3LI67 103 aa8.52□□□□□ -1.05
H3F3A-204ENST00000366816 COX7CP15954 63 aa8.46□□□□□ -1.06
H3F3A-204ENST00000366816 LINC01554Q52M75 96 aa8.44□□□□□ -1.06
H3F3A-204ENST00000366816 PLAC4Q8WY50 150 aa8.43□□□□□ -1.06
H3F3A-204ENST00000366816 CYSTM1Q9H1C7 97 aa8.38□□□□□ -1.07
H3F3A-204ENST00000366816 MT1XP80297 61 aa8.36□□□□□ -1.07
H3F3A-204ENST00000366816 COA5Q86WW8 74 aa8.34□□□□□ -1.07
H3F3A-204ENST00000366816 H7BZZ5 65 aa8.31□□□□□ -1.08
H3F3A-204ENST00000366816 PRO2289Q9P1D8 64 aa8.31□□□□□ -1.08
H3F3A-204ENST00000366816 ANAPC13Q9BS18 74 aa8.27□□□□□ -1.09
H3F3A-204ENST00000366816 KRTAP13-4Q3LI77 160 aa8.2□□□□□ -1.1
H3F3A-204ENST00000366816 CCDC179H3BU77 68 aa8.15□□□□□ -1.1
H3F3A-204ENST00000366816 KMT2DO14686 5537 aa8.13□□□□□ -1.11
H3F3A-204ENST00000366816 MUC12Q9UKN1 5478 aa8.13□□□□□ -1.11
H3F3A-204ENST00000366816 NEBP20929 6669 aa8.12□□□□□ -1.11
H3F3A-204ENST00000366816 KRTAP5-9P26371 169 aa8.11□□□□□ -1.11
H3F3A-204ENST00000366816 SEC61GP60059 68 aa8.09□□□□□ -1.11
H3F3A-204ENST00000366816 SERP1Q9Y6X1 66 aa8.08□□□□□ -1.12
H3F3A-204ENST00000366816 KRTAP12-2P59991 146 aa8.06□□□□□ -1.12
H3F3A-204ENST00000366816 KRTAP10-7P60409 375 aaPredicted RBP8.01□□□□□ -1.13
H3F3A-204ENST00000366816 KRTAP4-8A0A0G2JLE6 195 aa7.99□□□□□ -1.13
H3F3A-204ENST00000366816 SPATA8Q6RVD6 105 aa7.99□□□□□ -1.13
H3F3A-204ENST00000366816 KRTAP4-8Q9BYQ9 185 aa7.99□□□□□ -1.13
H3F3A-204ENST00000366816 A0A0D9SG42 100 aa7.98□□□□□ -1.13
H3F3A-204ENST00000366816 KRTAP8-1Q8IUC2 63 aa7.98□□□□□ -1.13
H3F3A-204ENST00000366816 A0A1B0GU33 70 aa7.97□□□□□ -1.13
H3F3A-204ENST00000366816 SPRR2FQ96RM1 72 aa7.96□□□□□ -1.14
H3F3A-204ENST00000366816 MDN1Q9NU22 5596 aa7.93□□□□□ -1.14
H3F3A-204ENST00000366816 KRTAP20-1Q3LI63 56 aa7.93□□□□□ -1.14
H3F3A-204ENST00000366816 KRTAP10-12P60413 245 aa7.92□□□□□ -1.14
H3F3A-204ENST00000366816 CAMK2N1Q7Z7J9 78 aa7.92□□□□□ -1.14
H3F3A-204ENST00000366816 A0A1B0GU69 56 aa7.9□□□□□ -1.14
H3F3A-204ENST00000366816 ATP5EP56381 51 aaPredicted RBP7.87□□□□□ -1.15
H3F3A-204ENST00000366816 SPINT4Q6UDR6 99 aa7.83□□□□□ -1.16
H3F3A-204ENST00000366816 SPRR2EP22531 72 aa7.79□□□□□ -1.16
H3F3A-204ENST00000366816 SPRR2BP35325 72 aa7.79□□□□□ -1.16
H3F3A-204ENST00000366816 SPRR2AP35326 72 aa7.79□□□□□ -1.16
H3F3A-204ENST00000366816 KRTAP12-1P59990 96 aa7.78□□□□□ -1.16
H3F3A-204ENST00000366816 TMEM258P61165 79 aa7.76□□□□□ -1.17
H3F3A-204ENST00000366816 A8MU10 97 aa7.74□□□□□ -1.17
H3F3A-204ENST00000366816 LCE1AQ5T7P2 110 aa7.72□□□□□ -1.17
H3F3A-204ENST00000366816 SMIM26A0A096LP01 95 aa7.71□□□□□ -1.18
H3F3A-204ENST00000366816 KRTAP2-3P0C7H8 128 aa7.71□□□□□ -1.18
H3F3A-204ENST00000366816 KRTAP2-4Q9BYR9 128 aa7.71□□□□□ -1.18
H3F3A-204ENST00000366816 PRR15LQ9BU68 103 aa7.68□□□□□ -1.18
H3F3A-204ENST00000366816 LINC01558Q9Y6Z2 57 aa7.68□□□□□ -1.18
H3F3A-204ENST00000366816 SPRR2DP22532 72 aa7.53□□□□□ -1.2
H3F3A-204ENST00000366816 KRTAP19-7Q3SYF9 63 aa7.47□□□□□ -1.21
H3F3A-204ENST00000366816 KRTAP2-2Q9BYT5 123 aa7.47□□□□□ -1.21
H3F3A-204ENST00000366816 KRTAP2-1Q9BYU5 128 aa7.47□□□□□ -1.21
H3F3A-204ENST00000366816 UQCR11O14957 56 aa7.45□□□□□ -1.22
H3F3A-204ENST00000366816 C10orf95Q9H7T3 257 aa7.45□□□□□ -1.22
H3F3A-204ENST00000366816 MT1EP04732 61 aa7.39□□□□□ -1.23
H3F3A-204ENST00000366816 KRTAP19-5Q3LI72 72 aa7.35□□□□□ -1.23
H3F3A-204ENST00000366816 PSPHP1O15172 72 aa7.33□□□□□ -1.24
H3F3A-204ENST00000366816 TNP1P09430 55 aa7.33□□□□□ -1.24
H3F3A-204ENST00000366816 MIR22HGQ0VDD5 57 aa7.32□□□□□ -1.24
H3F3A-204ENST00000366816 LCE3BQ5TA77 95 aa7.32□□□□□ -1.24
H3F3A-204ENST00000366816 Q1T7F1 81 aa7.29□□□□□ -1.24
H3F3A-204ENST00000366816 V9GYY9 64 aa7.29□□□□□ -1.24
H3F3A-204ENST00000366816 LCE3AQ5TA76 89 aa7.28□□□□□ -1.24
H3F3A-204ENST00000366816 LCE5AQ5TCM9 118 aa7.27□□□□□ -1.25
H3F3A-204ENST00000366816 KRTAP19-3Q7Z4W3 81 aa7.27□□□□□ -1.25
H3F3A-204ENST00000366816 PCP4P48539 62 aa7.19□□□□□ -1.26
H3F3A-204ENST00000366816 DSTQ03001 7570 aaKnown RBP7.11□□□□□ -1.27
H3F3A-204ENST00000366816 MT1GP13640 62 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms