RNA–Protein interactions for RNA: ENST00000366516.5

SMYD3-201, Transcript of SET and MYND domain containing 3, humanhuman

TSL 1 (best)

Gene SMYD3, Length 1,863 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-201ENST00000366516 DNAH11Q96DT5 4516 aa4.94□□□□□ -1.62
SMYD3-201ENST00000366516 KRTAP10-1P60331 282 aa4.94□□□□□ -1.62
SMYD3-201ENST00000366516 KRTAP9-2Q9BYQ4 174 aa4.94□□□□□ -1.62
SMYD3-201ENST00000366516 DNAH6Q9C0G6 4158 aa4.92□□□□□ -1.62
SMYD3-201ENST00000366516 KMT2AQ03164 3969 aa4.91□□□□□ -1.62
SMYD3-201ENST00000366516 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.91□□□□□ -1.62
SMYD3-201ENST00000366516 KRTAP9-6A0A140TA67 174 aa4.9□□□□□ -1.63
SMYD3-201ENST00000366516 DNAH5Q8TE73 4624 aa4.88□□□□□ -1.63
SMYD3-201ENST00000366516 COX6B2Q6YFQ2 88 aa4.88□□□□□ -1.63
SMYD3-201ENST00000366516 KRTAP3-1Q9BYR8 98 aa4.86□□□□□ -1.63
SMYD3-201ENST00000366516 KIAA1109Q2LD37 5005 aa4.84□□□□□ -1.63
SMYD3-201ENST00000366516 C9orf92A6NGG3 77 aa4.83□□□□□ -1.64
SMYD3-201ENST00000366516 RPL37P61927 97 aaKnown RBP4.83□□□□□ -1.64
SMYD3-201ENST00000366516 LCE3BQ5TA77 95 aa4.82□□□□□ -1.64
SMYD3-201ENST00000366516 LRP1BQ9NZR2 4599 aa4.8□□□□□ -1.64
SMYD3-201ENST00000366516 VPS13BQ7Z7G8 4022 aa4.79□□□□□ -1.64
SMYD3-201ENST00000366516 ABCA13Q86UQ4 5058 aa4.78□□□□□ -1.64
SMYD3-201ENST00000366516 PKD1P98161 4303 aa4.75□□□□□ -1.65
SMYD3-201ENST00000366516 SPINT4Q6UDR6 99 aa4.73□□□□□ -1.65
SMYD3-201ENST00000366516 PKHD1P08F94 4074 aa4.72□□□□□ -1.65
SMYD3-201ENST00000366516 DYNC1H1Q14204 4646 aaKnown RBP4.71□□□□□ -1.65
SMYD3-201ENST00000366516 KRTAP10-6P60371 365 aaPredicted RBP4.71□□□□□ -1.66
SMYD3-201ENST00000366516 FAT2Q9NYQ8 4349 aa4.71□□□□□ -1.66
SMYD3-201ENST00000366516 CRIPTQ9P021 101 aa4.71□□□□□ -1.66
SMYD3-201ENST00000366516 S4R3F8 94 aa4.7□□□□□ -1.66
SMYD3-201ENST00000366516 P0C880 135 aa4.69□□□□□ -1.66
SMYD3-201ENST00000366516 LCE4AQ5TA78 99 aa4.69□□□□□ -1.66
SMYD3-201ENST00000366516 KRTAP9-9Q9BYP9 154 aa4.69□□□□□ -1.66
SMYD3-201ENST00000366516 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
SMYD3-201ENST00000366516 HERC1Q15751 4861 aa4.69□□□□□ -1.66
SMYD3-201ENST00000366516 PKHD1L1Q86WI1 4243 aa4.68□□□□□ -1.66
SMYD3-201ENST00000366516 KRTAP4-5Q9BYR2 181 aa4.68□□□□□ -1.66
SMYD3-201ENST00000366516 A0A0D9SG42 100 aa4.66□□□□□ -1.66
SMYD3-201ENST00000366516 HSPG2P98160 4391 aa4.65□□□□□ -1.66
SMYD3-201ENST00000366516 KRTAP23-1A1A580 65 aa4.65□□□□□ -1.66
SMYD3-201ENST00000366516 KRTAP9-7A8MTY7 169 aa4.65□□□□□ -1.66
SMYD3-201ENST00000366516 SMR3BP02814 79 aaPredicted RBP4.64□□□□□ -1.67
SMYD3-201ENST00000366516 TPRXLQ17RH7 258 aa4.64□□□□□ -1.67
SMYD3-201ENST00000366516 KRTAP13-4Q3LI77 160 aa4.64□□□□□ -1.67
SMYD3-201ENST00000366516 KRTAP10-4P60372 401 aaPredicted RBP4.63□□□□□ -1.67
SMYD3-201ENST00000366516 A0A1B0GVY2 172 aa4.62□□□□□ -1.67
SMYD3-201ENST00000366516 APOBP04114 4563 aaKnown RBP4.59□□□□□ -1.67
SMYD3-201ENST00000366516 M0QZ58 72 aa4.59□□□□□ -1.67
SMYD3-201ENST00000366516 KRTAP15-1Q3LI76 137 aa4.59□□□□□ -1.67
SMYD3-201ENST00000366516 FLG2Q5D862 2391 aaPredicted RBP4.59□□□□□ -1.68
SMYD3-201ENST00000366516 KRTAP4-8A0A0G2JLE6 195 aa4.56□□□□□ -1.68
SMYD3-201ENST00000366516 KRTAP12-2P59991 146 aa4.55□□□□□ -1.68
SMYD3-201ENST00000366516 C10orf95Q9H7T3 257 aa4.54□□□□□ -1.68
SMYD3-201ENST00000366516 NDUFAF8A1L188 74 aa4.54□□□□□ -1.68
SMYD3-201ENST00000366516 KRTAP12-1P59990 96 aa4.54□□□□□ -1.68
SMYD3-201ENST00000366516 LCE1DQ5T752 114 aa4.52□□□□□ -1.69
SMYD3-201ENST00000366516 UBR4Q5T4S7 5183 aa4.52□□□□□ -1.69
SMYD3-201ENST00000366516 KRTAP10-8P60410 259 aa4.51□□□□□ -1.69
SMYD3-201ENST00000366516 DMBT1Q9UGM3 2413 aaPredicted RBP4.51□□□□□ -1.69
SMYD3-201ENST00000366516 KRTAP9-3Q9BYQ3 159 aa4.47□□□□□ -1.69
SMYD3-201ENST00000366516 MYCBP2O75592 4640 aa4.46□□□□□ -1.7
SMYD3-201ENST00000366516 TNXBP22105 4242 aa4.46□□□□□ -1.7
SMYD3-201ENST00000366516 FAT3Q8TDW7 4589 aa4.45□□□□□ -1.7
SMYD3-201ENST00000366516 FAT1Q14517 4588 aa4.44□□□□□ -1.7
SMYD3-201ENST00000366516 LRP1Q07954 4544 aaKnown RBP4.42□□□□□ -1.7
SMYD3-201ENST00000366516 Q5VSD8 79 aa4.4□□□□□ -1.71
SMYD3-201ENST00000366516 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
SMYD3-201ENST00000366516 HMCN2Q8NDA2 5059 aa4.38□□□□□ -1.71
SMYD3-201ENST00000366516 KRTAP4-7Q9BYR0 210 aa4.38□□□□□ -1.71
SMYD3-201ENST00000366516 R4GN34 69 aa4.38□□□□□ -1.71
SMYD3-201ENST00000366516 PP632Q6XCG6 107 aa4.35□□□□□ -1.71
SMYD3-201ENST00000366516 KRTAP4-9Q9BYQ8 210 aa4.35□□□□□ -1.71
SMYD3-201ENST00000366516 PLAC4Q8WY50 150 aa4.34□□□□□ -1.71
SMYD3-201ENST00000366516 LUZP6Q538Z0 58 aa4.28□□□□□ -1.72
SMYD3-201ENST00000366516 MT1HL1P0DM35 61 aa4.26□□□□□ -1.73
SMYD3-201ENST00000366516 RNF213Q63HN8 5207 aa4.24□□□□□ -1.73
SMYD3-201ENST00000366516 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
SMYD3-201ENST00000366516 SEC61BP60468 96 aaKnown RBP4.23□□□□□ -1.73
SMYD3-201ENST00000366516 A0A0A0MQY5 61 aa4.22□□□□□ -1.73
SMYD3-201ENST00000366516 LRP2P98164 4655 aa4.2□□□□□ -1.74
SMYD3-201ENST00000366516 CAMK2N1Q7Z7J9 78 aa4.18□□□□□ -1.74
SMYD3-201ENST00000366516 KRTAP4-2Q9BYR5 136 aa4.18□□□□□ -1.74
SMYD3-201ENST00000366516 LPAP08519 4548 aa4.11□□□□□ -1.75
SMYD3-201ENST00000366516 TNP1P09430 55 aa4.09□□□□□ -1.76
SMYD3-201ENST00000366516 SPRR5A0A1B0GTR4 108 aa4.02□□□□□ -1.77
SMYD3-201ENST00000366516 FAT4Q6V0I7 4981 aa4.01□□□□□ -1.77
SMYD3-201ENST00000366516 MUC17Q685J3 4493 aa3.99□□□□□ -1.77
SMYD3-201ENST00000366516 MUC2Q02817 5179 aa3.96□□□□□ -1.78
SMYD3-201ENST00000366516 KRTAP19-2Q3LHN2 52 aa3.95□□□□□ -1.78
SMYD3-201ENST00000366516 KRTAP4-1Q9BYQ7 146 aa3.94□□□□□ -1.78
SMYD3-201ENST00000366516 FSIP2Q5CZC0 6907 aa3.86□□□□□ -1.79
SMYD3-201ENST00000366516 FLGP20930 4061 aaPredicted RBP3.82□□□□□ -1.8
SMYD3-201ENST00000366516 SPRR2GQ9BYE4 73 aa3.81□□□□□ -1.8
SMYD3-201ENST00000366516 PRO2289Q9P1D8 64 aa3.81□□□□□ -1.8
SMYD3-201ENST00000366516 CRCT1Q9UGL9 99 aa3.81□□□□□ -1.8
SMYD3-201ENST00000366516 INE1O15225 51 aa3.81□□□□□ -1.8
SMYD3-201ENST00000366516 LCE3AQ5TA76 89 aa3.73□□□□□ -1.81
SMYD3-201ENST00000366516 KRTAP8-1Q8IUC2 63 aa3.71□□□□□ -1.82
SMYD3-201ENST00000366516 M0R2T5 61 aa3.65□□□□□ -1.82
SMYD3-201ENST00000366516 LCE1AQ5T7P2 110 aa3.62□□□□□ -1.83
SMYD3-201ENST00000366516 KRTAP19-8Q3LI54 63 aa3.6□□□□□ -1.83
SMYD3-201ENST00000366516 KRTAP10-10P60014 251 aa3.59□□□□□ -1.83
SMYD3-201ENST00000366516 KRTAP12-3P60328 96 aa3.59□□□□□ -1.83
SMYD3-201ENST00000366516 KRTAP10-12P60413 245 aa3.58□□□□□ -1.84
SMYD3-201ENST00000366516 MT1HP80294 61 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms