RNA–Protein interactions for RNA: ENST00000366497.6

NLRP3-204, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-204ENST00000366497 C10orf95Q9H7T3 257 aa4.36□□□□□ -1.71
NLRP3-204ENST00000366497 KMT2AQ03164 3969 aa4.36□□□□□ -1.71
NLRP3-204ENST00000366497 FAT1Q14517 4588 aa4.36□□□□□ -1.71
NLRP3-204ENST00000366497 DNAH3Q8TD57 4116 aa4.36□□□□□ -1.71
NLRP3-204ENST00000366497 KRTAP4-5Q9BYR2 181 aa4.35□□□□□ -1.71
NLRP3-204ENST00000366497 LRP1BQ9NZR2 4599 aa4.35□□□□□ -1.71
NLRP3-204ENST00000366497 DNAH2Q9P225 4427 aa4.33□□□□□ -1.72
NLRP3-204ENST00000366497 DYNC1H1Q14204 4646 aaKnown RBP4.33□□□□□ -1.72
NLRP3-204ENST00000366497 CMYA5Q8N3K9 4069 aa4.32□□□□□ -1.72
NLRP3-204ENST00000366497 KRTAP10-6P60371 365 aaPredicted RBP4.31□□□□□ -1.72
NLRP3-204ENST00000366497 LYSTQ99698 3801 aa4.3□□□□□ -1.72
NLRP3-204ENST00000366497 DNAH8Q96JB1 4490 aa4.28□□□□□ -1.72
NLRP3-204ENST00000366497 KRTAP12-2P59991 146 aa4.28□□□□□ -1.72
NLRP3-204ENST00000366497 KRTAP13-4Q3LI77 160 aa4.27□□□□□ -1.73
NLRP3-204ENST00000366497 PRO2289Q9P1D8 64 aa4.27□□□□□ -1.73
NLRP3-204ENST00000366497 KRTAP3-3Q9BYR6 98 aa4.26□□□□□ -1.73
NLRP3-204ENST00000366497 KRTAP12-1P59990 96 aa4.24□□□□□ -1.73
NLRP3-204ENST00000366497 DYNC2H1Q8NCM8 4307 aaKnown RBP4.24□□□□□ -1.73
NLRP3-204ENST00000366497 KRTAP15-1Q3LI76 137 aa4.24□□□□□ -1.73
NLRP3-204ENST00000366497 PP632Q6XCG6 107 aa4.23□□□□□ -1.73
NLRP3-204ENST00000366497 DNAH7Q8WXX0 4024 aa4.22□□□□□ -1.73
NLRP3-204ENST00000366497 KRTAP3-2Q9BYR7 98 aa4.21□□□□□ -1.74
NLRP3-204ENST00000366497 KIAA1109Q2LD37 5005 aa4.19□□□□□ -1.74
NLRP3-204ENST00000366497 RYR1P21817 5038 aa4.18□□□□□ -1.74
NLRP3-204ENST00000366497 VPS13BQ7Z7G8 4022 aa4.18□□□□□ -1.74
NLRP3-204ENST00000366497 RYR2Q92736 4967 aa4.17□□□□□ -1.74
NLRP3-204ENST00000366497 DNAH6Q9C0G6 4158 aa4.17□□□□□ -1.74
NLRP3-204ENST00000366497 FAT2Q9NYQ8 4349 aa4.16□□□□□ -1.74
NLRP3-204ENST00000366497 SACSQ9NZJ4 4579 aa4.16□□□□□ -1.74
NLRP3-204ENST00000366497 KMT2CQ8NEZ4 4911 aaKnown RBP4.14□□□□□ -1.75
NLRP3-204ENST00000366497 HECTD4Q9Y4D8 3996 aa4.14□□□□□ -1.75
NLRP3-204ENST00000366497 FRAS1Q86XX4 4008 aa4.14□□□□□ -1.75
NLRP3-204ENST00000366497 MYCBP2O75592 4640 aa4.13□□□□□ -1.75
NLRP3-204ENST00000366497 HYDINQ4G0P3 5121 aa4.11□□□□□ -1.75
NLRP3-204ENST00000366497 APOBP04114 4563 aaKnown RBP4.11□□□□□ -1.75
NLRP3-204ENST00000366497 RYR3Q15413 4870 aa4.11□□□□□ -1.75
NLRP3-204ENST00000366497 LRP1Q07954 4544 aaKnown RBP4.08□□□□□ -1.76
NLRP3-204ENST00000366497 HERC2O95714 4834 aa4.05□□□□□ -1.76
NLRP3-204ENST00000366497 EPPK1P58107 5090 aaKnown RBP4.04□□□□□ -1.76
NLRP3-204ENST00000366497 PKHD1P08F94 4074 aa4.04□□□□□ -1.76
NLRP3-204ENST00000366497 FAT3Q8TDW7 4589 aa4.02□□□□□ -1.77
NLRP3-204ENST00000366497 KRTAP4-1Q9BYQ7 146 aa4.02□□□□□ -1.77
NLRP3-204ENST00000366497 LORP23490 312 aaPredicted RBP4□□□□□ -1.77
NLRP3-204ENST00000366497 PCLOQ9Y6V0 5065 aa3.95□□□□□ -1.78
NLRP3-204ENST00000366497 PKD1P98161 4303 aa3.93□□□□□ -1.78
NLRP3-204ENST00000366497 HSPG2P98160 4391 aa3.87□□□□□ -1.79
NLRP3-204ENST00000366497 LRP2P98164 4655 aa3.87□□□□□ -1.79
NLRP3-204ENST00000366497 ABCA13Q86UQ4 5058 aa3.81□□□□□ -1.8
NLRP3-204ENST00000366497 MT1HP80294 61 aa3.78□□□□□ -1.8
NLRP3-204ENST00000366497 KRTAP10-12P60413 245 aa3.74□□□□□ -1.81
NLRP3-204ENST00000366497 PKHD1L1Q86WI1 4243 aa3.73□□□□□ -1.81
NLRP3-204ENST00000366497 MT2AP02795 61 aa3.72□□□□□ -1.81
NLRP3-204ENST00000366497 LPAP08519 4548 aa3.72□□□□□ -1.81
NLRP3-204ENST00000366497 KRTAP9-2Q9BYQ4 174 aa3.71□□□□□ -1.82
NLRP3-204ENST00000366497 KRTAP9-6A0A140TA67 174 aa3.7□□□□□ -1.82
NLRP3-204ENST00000366497 SPRR2GQ9BYE4 73 aa3.7□□□□□ -1.82
NLRP3-204ENST00000366497 LCE3AQ5TA76 89 aa3.69□□□□□ -1.82
NLRP3-204ENST00000366497 MT1FP04733 61 aa3.68□□□□□ -1.82
NLRP3-204ENST00000366497 KRTAP23-1A1A580 65 aa3.68□□□□□ -1.82
NLRP3-204ENST00000366497 TNXBP22105 4242 aa3.67□□□□□ -1.82
NLRP3-204ENST00000366497 KRTAP12-3P60328 96 aa3.66□□□□□ -1.82
NLRP3-204ENST00000366497 HERC1Q15751 4861 aa3.65□□□□□ -1.82
NLRP3-204ENST00000366497 INE1O15225 51 aa3.64□□□□□ -1.83
NLRP3-204ENST00000366497 KRTAP19-1Q8IUB9 90 aa3.59□□□□□ -1.83
NLRP3-204ENST00000366497 CRCT1Q9UGL9 99 aa3.58□□□□□ -1.84
NLRP3-204ENST00000366497 LCE2CQ5TA81 110 aa3.58□□□□□ -1.84
NLRP3-204ENST00000366497 KRTAP19-2Q3LHN2 52 aa3.54□□□□□ -1.84
NLRP3-204ENST00000366497 KRTAP8-1Q8IUC2 63 aa3.53□□□□□ -1.84
NLRP3-204ENST00000366497 UBR4Q5T4S7 5183 aa3.51□□□□□ -1.85
NLRP3-204ENST00000366497 KRTAP9-8Q9BYQ0 159 aa3.51□□□□□ -1.85
NLRP3-204ENST00000366497 RNF213Q63HN8 5207 aa3.5□□□□□ -1.85
NLRP3-204ENST00000366497 HMCN2Q8NDA2 5059 aa3.5□□□□□ -1.85
NLRP3-204ENST00000366497 KRTAP19-8Q3LI54 63 aa3.49□□□□□ -1.85
NLRP3-204ENST00000366497 MUC17Q685J3 4493 aa3.49□□□□□ -1.85
NLRP3-204ENST00000366497 LCE2DQ5TA82 110 aaPredicted RBP3.47□□□□□ -1.85
NLRP3-204ENST00000366497 FSIP2Q5CZC0 6907 aa3.46□□□□□ -1.86
NLRP3-204ENST00000366497 MUC2Q02817 5179 aa3.44□□□□□ -1.86
NLRP3-204ENST00000366497 LCE2AQ5TA79 106 aaPredicted RBP3.44□□□□□ -1.86
NLRP3-204ENST00000366497 MT1BP07438 61 aa3.43□□□□□ -1.86
NLRP3-204ENST00000366497 FLGP20930 4061 aaPredicted RBP3.43□□□□□ -1.86
NLRP3-204ENST00000366497 MT1XP80297 61 aa3.41□□□□□ -1.86
NLRP3-204ENST00000366497 KRTAP10-7P60409 375 aaPredicted RBP3.4□□□□□ -1.86
NLRP3-204ENST00000366497 KRTAP10-5P60370 271 aa3.39□□□□□ -1.87
NLRP3-204ENST00000366497 KRTAP9-3Q9BYQ3 159 aa3.39□□□□□ -1.87
NLRP3-204ENST00000366497 KRTAP19-5Q3LI72 72 aa3.38□□□□□ -1.87
NLRP3-204ENST00000366497 FAT4Q6V0I7 4981 aa3.36□□□□□ -1.87
NLRP3-204ENST00000366497 KRTAP9-7A8MTY7 169 aa3.33□□□□□ -1.88
NLRP3-204ENST00000366497 SPRR2FQ96RM1 72 aa3.31□□□□□ -1.88
NLRP3-204ENST00000366497 SPRR5A0A1B0GTR4 108 aa3.31□□□□□ -1.88
NLRP3-204ENST00000366497 LCE2BO14633 110 aa3.27□□□□□ -1.89
NLRP3-204ENST00000366497 KRTAP19-4Q3LI73 84 aa3.27□□□□□ -1.89
NLRP3-204ENST00000366497 LCE3CQ5T5A8 94 aa3.27□□□□□ -1.89
NLRP3-204ENST00000366497 KRTAP4-8A0A0G2JLE6 195 aa3.26□□□□□ -1.89
NLRP3-204ENST00000366497 KRTAP4-8Q9BYQ9 185 aa3.26□□□□□ -1.89
NLRP3-204ENST00000366497 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.22□□□□□ -1.89
NLRP3-204ENST00000366497 SPRR2EP22531 72 aa3.12□□□□□ -1.91
NLRP3-204ENST00000366497 SPRR2BP35325 72 aa3.12□□□□□ -1.91
NLRP3-204ENST00000366497 SPRR2AP35326 72 aa3.12□□□□□ -1.91
NLRP3-204ENST00000366497 KRTAP4-7Q9BYR0 210 aa3.05□□□□□ -1.92
NLRP3-204ENST00000366497 KRTAP20-1Q3LI63 56 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms