RNA–Protein interactions for RNA: ENST00000361675.6

CALD1-201, Transcript of caldesmon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALD1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-201ENST00000361675 PRO2289Q9P1D8 64 aa4.86□□□□□ -1.63
CALD1-201ENST00000361675 KMT2CQ8NEZ4 4911 aaKnown RBP4.86□□□□□ -1.63
CALD1-201ENST00000361675 KRTAP10-1P60331 282 aa4.85□□□□□ -1.63
CALD1-201ENST00000361675 PLAC4Q8WY50 150 aa4.85□□□□□ -1.63
CALD1-201ENST00000361675 FAT1Q14517 4588 aa4.84□□□□□ -1.64
CALD1-201ENST00000361675 DYNC1H1Q14204 4646 aaKnown RBP4.84□□□□□ -1.64
CALD1-201ENST00000361675 RYR2Q92736 4967 aa4.78□□□□□ -1.64
CALD1-201ENST00000361675 KRTAP13-2Q52LG2 175 aa4.78□□□□□ -1.64
CALD1-201ENST00000361675 S4R3F8 94 aa4.78□□□□□ -1.64
CALD1-201ENST00000361675 APOBP04114 4563 aaKnown RBP4.77□□□□□ -1.65
CALD1-201ENST00000361675 KRTAP1-4P0C5Y4 121 aa4.73□□□□□ -1.65
CALD1-201ENST00000361675 KRTAP13-4Q3LI77 160 aa4.73□□□□□ -1.65
CALD1-201ENST00000361675 RYR3Q15413 4870 aa4.72□□□□□ -1.65
CALD1-201ENST00000361675 SMR3BP02814 79 aaPredicted RBP4.7□□□□□ -1.66
CALD1-201ENST00000361675 KRTAP12-2P59991 146 aa4.68□□□□□ -1.66
CALD1-201ENST00000361675 KRTAP21-3Q3LHN1 58 aa4.68□□□□□ -1.66
CALD1-201ENST00000361675 KRTAP3-1Q9BYR8 98 aa4.68□□□□□ -1.66
CALD1-201ENST00000361675 KRTAP3-3Q9BYR6 98 aa4.68□□□□□ -1.66
CALD1-201ENST00000361675 KRTAP3-2Q9BYR7 98 aa4.68□□□□□ -1.66
CALD1-201ENST00000361675 LRP1Q07954 4544 aaKnown RBP4.67□□□□□ -1.66
CALD1-201ENST00000361675 PKHD1L1Q86WI1 4243 aa4.67□□□□□ -1.66
CALD1-201ENST00000361675 KRTAP10-8P60410 259 aa4.66□□□□□ -1.66
CALD1-201ENST00000361675 A0A1B0GVY2 172 aa4.63□□□□□ -1.67
CALD1-201ENST00000361675 KRTAP10-4P60372 401 aaPredicted RBP4.61□□□□□ -1.67
CALD1-201ENST00000361675 HSPG2P98160 4391 aa4.61□□□□□ -1.67
CALD1-201ENST00000361675 KRTAP10-6P60371 365 aaPredicted RBP4.58□□□□□ -1.68
CALD1-201ENST00000361675 KRTAP17-1Q9BYP8 105 aa4.58□□□□□ -1.68
CALD1-201ENST00000361675 TNXBP22105 4242 aa4.58□□□□□ -1.68
CALD1-201ENST00000361675 MYCBP2O75592 4640 aa4.57□□□□□ -1.68
CALD1-201ENST00000361675 KIAA1109Q2LD37 5005 aa4.56□□□□□ -1.68
CALD1-201ENST00000361675 EPPK1P58107 5090 aaKnown RBP4.55□□□□□ -1.68
CALD1-201ENST00000361675 FAT3Q8TDW7 4589 aa4.54□□□□□ -1.68
CALD1-201ENST00000361675 KRTAP12-1P59990 96 aa4.54□□□□□ -1.68
CALD1-201ENST00000361675 RYR1P21817 5038 aa4.53□□□□□ -1.68
CALD1-201ENST00000361675 XP32Q5T750 250 aa4.53□□□□□ -1.68
CALD1-201ENST00000361675 M0QZ58 72 aa4.48□□□□□ -1.69
CALD1-201ENST00000361675 INE1O15225 51 aa4.47□□□□□ -1.69
CALD1-201ENST00000361675 PP632Q6XCG6 107 aa4.46□□□□□ -1.7
CALD1-201ENST00000361675 LPAP08519 4548 aa4.44□□□□□ -1.7
CALD1-201ENST00000361675 ABCA13Q86UQ4 5058 aa4.43□□□□□ -1.7
CALD1-201ENST00000361675 RPS29P62273 56 aaKnown RBP4.41□□□□□ -1.7
CALD1-201ENST00000361675 Q5VSD8 79 aa4.39□□□□□ -1.71
CALD1-201ENST00000361675 LRP2P98164 4655 aa4.37□□□□□ -1.71
CALD1-201ENST00000361675 LCE2CQ5TA81 110 aa4.33□□□□□ -1.72
CALD1-201ENST00000361675 MT1HL1P0DM35 61 aa4.31□□□□□ -1.72
CALD1-201ENST00000361675 KRTAP4-5Q9BYR2 181 aa4.31□□□□□ -1.72
CALD1-201ENST00000361675 HERC2O95714 4834 aa4.22□□□□□ -1.73
CALD1-201ENST00000361675 LCE2AQ5TA79 106 aaPredicted RBP4.21□□□□□ -1.74
CALD1-201ENST00000361675 MUC2Q02817 5179 aa4.19□□□□□ -1.74
CALD1-201ENST00000361675 LCE2DQ5TA82 110 aaPredicted RBP4.15□□□□□ -1.74
CALD1-201ENST00000361675 HERC1Q15751 4861 aa4.13□□□□□ -1.75
CALD1-201ENST00000361675 MUC17Q685J3 4493 aa4.12□□□□□ -1.75
CALD1-201ENST00000361675 PCLOQ9Y6V0 5065 aa4.12□□□□□ -1.75
CALD1-201ENST00000361675 TNP1P09430 55 aa4.1□□□□□ -1.75
CALD1-201ENST00000361675 LCE2BO14633 110 aa4.09□□□□□ -1.76
CALD1-201ENST00000361675 BIRC6Q9NR09 4857 aa4.09□□□□□ -1.76
CALD1-201ENST00000361675 KRTAP4-1Q9BYQ7 146 aa4.06□□□□□ -1.76
CALD1-201ENST00000361675 LORP23490 312 aaPredicted RBP4.03□□□□□ -1.76
CALD1-201ENST00000361675 HMCN2Q8NDA2 5059 aa3.98□□□□□ -1.77
CALD1-201ENST00000361675 FAT4Q6V0I7 4981 aa3.97□□□□□ -1.77
CALD1-201ENST00000361675 RNF213Q63HN8 5207 aa3.95□□□□□ -1.78
CALD1-201ENST00000361675 KRTAP19-2Q3LHN2 52 aa3.94□□□□□ -1.78
CALD1-201ENST00000361675 UBR4Q5T4S7 5183 aa3.91□□□□□ -1.78
CALD1-201ENST00000361675 FLGP20930 4061 aaPredicted RBP3.89□□□□□ -1.79
CALD1-201ENST00000361675 SPRR5A0A1B0GTR4 108 aa3.86□□□□□ -1.79
CALD1-201ENST00000361675 LCE3AQ5TA76 89 aa3.72□□□□□ -1.81
CALD1-201ENST00000361675 MT1HP80294 61 aa3.61□□□□□ -1.83
CALD1-201ENST00000361675 M0R2T5 61 aa3.58□□□□□ -1.84
CALD1-201ENST00000361675 KRTAP19-1Q8IUB9 90 aa3.56□□□□□ -1.84
CALD1-201ENST00000361675 MT1FP04733 61 aa3.55□□□□□ -1.84
CALD1-201ENST00000361675 KRTAP9-8Q9BYQ0 159 aa3.53□□□□□ -1.84
CALD1-201ENST00000361675 MT2AP02795 61 aa3.53□□□□□ -1.84
CALD1-201ENST00000361675 KRTAP12-3P60328 96 aa3.52□□□□□ -1.85
CALD1-201ENST00000361675 SPRR2GQ9BYE4 73 aa3.5□□□□□ -1.85
CALD1-201ENST00000361675 USH2AO75445 5202 aa3.49□□□□□ -1.85
CALD1-201ENST00000361675 KRTAP10-10P60014 251 aa3.48□□□□□ -1.85
CALD1-201ENST00000361675 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
CALD1-201ENST00000361675 MT1BP07438 61 aa3.39□□□□□ -1.87
CALD1-201ENST00000361675 LCE3CQ5T5A8 94 aa3.39□□□□□ -1.87
CALD1-201ENST00000361675 KRTAP10-12P60413 245 aa3.39□□□□□ -1.87
CALD1-201ENST00000361675 KRTAP8-1Q8IUC2 63 aa3.39□□□□□ -1.87
CALD1-201ENST00000361675 KRTAP9-3Q9BYQ3 159 aa3.38□□□□□ -1.87
CALD1-201ENST00000361675 LCE1AQ5T7P2 110 aa3.37□□□□□ -1.87
CALD1-201ENST00000361675 KRTAP19-8Q3LI54 63 aa3.36□□□□□ -1.87
CALD1-201ENST00000361675 KMT2DO14686 5537 aa3.35□□□□□ -1.87
CALD1-201ENST00000361675 KRTAP2-2Q9BYT5 123 aa3.35□□□□□ -1.87
CALD1-201ENST00000361675 KRTAP10-5P60370 271 aa3.34□□□□□ -1.87
CALD1-201ENST00000361675 MT1XP80297 61 aa3.34□□□□□ -1.88
CALD1-201ENST00000361675 LCE1FQ5T754 118 aa3.34□□□□□ -1.88
CALD1-201ENST00000361675 LCE5AQ5TCM9 118 aa3.32□□□□□ -1.88
CALD1-201ENST00000361675 KRTAP10-7P60409 375 aaPredicted RBP3.27□□□□□ -1.89
CALD1-201ENST00000361675 FSIP2Q5CZC0 6907 aa3.24□□□□□ -1.89
CALD1-201ENST00000361675 SYNE1Q8NF91 8797 aaKnown RBP3.21□□□□□ -1.89
CALD1-201ENST00000361675 KRTAP12-4P60329 112 aa3.2□□□□□ -1.9
CALD1-201ENST00000361675 SSPOA2VEC9 5147 aa3.19□□□□□ -1.9
CALD1-201ENST00000361675 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
CALD1-201ENST00000361675 LCE1DQ5T752 114 aa3.18□□□□□ -1.9
CALD1-201ENST00000361675 CRCT1Q9UGL9 99 aa3.17□□□□□ -1.9
CALD1-201ENST00000361675 KRTAP19-5Q3LI72 72 aa3.17□□□□□ -1.9
CALD1-201ENST00000361675 LCE3EQ5T5B0 92 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms