RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 RPS29P62273 56 aaKnown RBP8.66□□□□□ -1.02
IFT140-201ENST00000361339 H1FX-AS1Q4G0G2 97 aa8.66□□□□□ -1.02
IFT140-201ENST00000361339 KRTAP17-1Q9BYP8 105 aa8.63□□□□□ -1.03
IFT140-201ENST00000361339 KIAA1109Q2LD37 5005 aa8.61□□□□□ -1.03
IFT140-201ENST00000361339 P0C880 135 aa8.61□□□□□ -1.03
IFT140-201ENST00000361339 C20orf166-AS1Q96NR2 134 aa8.61□□□□□ -1.03
IFT140-201ENST00000361339 KRTAP3-1Q9BYR8 98 aa8.61□□□□□ -1.03
IFT140-201ENST00000361339 K7ERS5 55 aa8.59□□□□□ -1.03
IFT140-201ENST00000361339 A0A0D9SG42 100 aa8.58□□□□□ -1.04
IFT140-201ENST00000361339 RYR1P21817 5038 aa8.57□□□□□ -1.04
IFT140-201ENST00000361339 SPINT4Q6UDR6 99 aa8.55□□□□□ -1.04
IFT140-201ENST00000361339 COX6B2Q6YFQ2 88 aa8.54□□□□□ -1.04
IFT140-201ENST00000361339 Q5VSD8 79 aa8.51□□□□□ -1.05
IFT140-201ENST00000361339 C10orf95Q9H7T3 257 aa8.49□□□□□ -1.05
IFT140-201ENST00000361339 EPPK1P58107 5090 aaKnown RBP8.47□□□□□ -1.05
IFT140-201ENST00000361339 KRTAP10-8P60410 259 aa8.44□□□□□ -1.06
IFT140-201ENST00000361339 LPAP08519 4548 aa8.44□□□□□ -1.06
IFT140-201ENST00000361339 TPRXLQ17RH7 258 aa8.4□□□□□ -1.06
IFT140-201ENST00000361339 NDUFAF8A1L188 74 aa8.37□□□□□ -1.07
IFT140-201ENST00000361339 KRTAP13-4Q3LI77 160 aa8.37□□□□□ -1.07
IFT140-201ENST00000361339 RPL37P61927 97 aaKnown RBP8.36□□□□□ -1.07
IFT140-201ENST00000361339 ABCA13Q86UQ4 5058 aa8.33□□□□□ -1.08
IFT140-201ENST00000361339 LRP2P98164 4655 aa8.33□□□□□ -1.08
IFT140-201ENST00000361339 XP32Q5T750 250 aa8.32□□□□□ -1.08
IFT140-201ENST00000361339 MT1HL1P0DM35 61 aa8.28□□□□□ -1.08
IFT140-201ENST00000361339 KRTAP10-6P60371 365 aaPredicted RBP8.25□□□□□ -1.09
IFT140-201ENST00000361339 KRTAP3-3Q9BYR6 98 aa8.22□□□□□ -1.09
IFT140-201ENST00000361339 KRTAP4-5Q9BYR2 181 aa8.17□□□□□ -1.1
IFT140-201ENST00000361339 KRTAP12-2P59991 146 aa8.13□□□□□ -1.11
IFT140-201ENST00000361339 KRTAP3-2Q9BYR7 98 aa8.13□□□□□ -1.11
IFT140-201ENST00000361339 S4R3F8 94 aa8.12□□□□□ -1.11
IFT140-201ENST00000361339 KRTAP15-1Q3LI76 137 aa8.11□□□□□ -1.11
IFT140-201ENST00000361339 KRTAP12-1P59990 96 aa7.95□□□□□ -1.14
IFT140-201ENST00000361339 HERC2O95714 4834 aa7.92□□□□□ -1.14
IFT140-201ENST00000361339 MUC2Q02817 5179 aa7.87□□□□□ -1.15
IFT140-201ENST00000361339 MUC17Q685J3 4493 aa7.83□□□□□ -1.16
IFT140-201ENST00000361339 KRTAP4-1Q9BYQ7 146 aa7.8□□□□□ -1.16
IFT140-201ENST00000361339 A0A0A0MQY5 61 aa7.72□□□□□ -1.17
IFT140-201ENST00000361339 M0QZ58 72 aa7.71□□□□□ -1.18
IFT140-201ENST00000361339 J3QL48 77 aa7.69□□□□□ -1.18
IFT140-201ENST00000361339 HERC1Q15751 4861 aa7.68□□□□□ -1.18
IFT140-201ENST00000361339 PLAC4Q8WY50 150 aa7.65□□□□□ -1.18
IFT140-201ENST00000361339 LORP23490 312 aaPredicted RBP7.65□□□□□ -1.19
IFT140-201ENST00000361339 PCLOQ9Y6V0 5065 aa7.64□□□□□ -1.19
IFT140-201ENST00000361339 LUZP6Q538Z0 58 aa7.62□□□□□ -1.19
IFT140-201ENST00000361339 R4GN34 69 aa7.62□□□□□ -1.19
IFT140-201ENST00000361339 BIRC6Q9NR09 4857 aa7.62□□□□□ -1.19
IFT140-201ENST00000361339 SEC61BP60468 96 aaKnown RBP7.6□□□□□ -1.19
IFT140-201ENST00000361339 KRTAP19-2Q3LHN2 52 aa7.54□□□□□ -1.2
IFT140-201ENST00000361339 FAT4Q6V0I7 4981 aa7.49□□□□□ -1.21
IFT140-201ENST00000361339 HMCN2Q8NDA2 5059 aa7.46□□□□□ -1.22
IFT140-201ENST00000361339 RNF213Q63HN8 5207 aa7.38□□□□□ -1.23
IFT140-201ENST00000361339 FLGP20930 4061 aaPredicted RBP7.38□□□□□ -1.23
IFT140-201ENST00000361339 CAMK2N1Q7Z7J9 78 aa7.36□□□□□ -1.23
IFT140-201ENST00000361339 UBR4Q5T4S7 5183 aa7.31□□□□□ -1.24
IFT140-201ENST00000361339 LCE2CQ5TA81 110 aa7.15□□□□□ -1.27
IFT140-201ENST00000361339 PP632Q6XCG6 107 aa7.11□□□□□ -1.27
IFT140-201ENST00000361339 TNP1P09430 55 aa6.97□□□□□ -1.29
IFT140-201ENST00000361339 M0R2T5 61 aa6.97□□□□□ -1.29
IFT140-201ENST00000361339 MT1HP80294 61 aa6.94□□□□□ -1.3
IFT140-201ENST00000361339 KRTAP19-1Q8IUB9 90 aa6.91□□□□□ -1.3
IFT140-201ENST00000361339 MT1FP04733 61 aa6.85□□□□□ -1.31
IFT140-201ENST00000361339 MT2AP02795 61 aa6.81□□□□□ -1.32
IFT140-201ENST00000361339 SPRR2GQ9BYE4 73 aa6.81□□□□□ -1.32
IFT140-201ENST00000361339 KRTAP10-10P60014 251 aa6.8□□□□□ -1.32
IFT140-201ENST00000361339 KRTAP9-8Q9BYQ0 159 aa6.77□□□□□ -1.33
IFT140-201ENST00000361339 SPRR5A0A1B0GTR4 108 aa6.75□□□□□ -1.33
IFT140-201ENST00000361339 LCE3AQ5TA76 89 aa6.63□□□□□ -1.35
IFT140-201ENST00000361339 USH2AO75445 5202 aa6.58□□□□□ -1.36
IFT140-201ENST00000361339 MT1BP07438 61 aa6.57□□□□□ -1.36
IFT140-201ENST00000361339 KRTAP23-1A1A580 65 aa6.56□□□□□ -1.36
IFT140-201ENST00000361339 PRO2289Q9P1D8 64 aa6.54□□□□□ -1.36
IFT140-201ENST00000361339 KRTAP19-8Q3LI54 63 aa6.51□□□□□ -1.37
IFT140-201ENST00000361339 KRTAP10-5P60370 271 aa6.49□□□□□ -1.37
IFT140-201ENST00000361339 MT1XP80297 61 aa6.49□□□□□ -1.37
IFT140-201ENST00000361339 KRTAP9-3Q9BYQ3 159 aa6.47□□□□□ -1.37
IFT140-201ENST00000361339 KMT2DO14686 5537 aa6.4□□□□□ -1.39
IFT140-201ENST00000361339 KRTAP10-7P60409 375 aaPredicted RBP6.37□□□□□ -1.39
IFT140-201ENST00000361339 INE1O15225 51 aa6.32□□□□□ -1.4
IFT140-201ENST00000361339 LCE2BO14633 110 aa6.31□□□□□ -1.4
IFT140-201ENST00000361339 KRTAP10-12P60413 245 aa6.27□□□□□ -1.41
IFT140-201ENST00000361339 KRTAP8-1Q8IUC2 63 aa6.26□□□□□ -1.41
IFT140-201ENST00000361339 KRTAP12-3P60328 96 aa6.23□□□□□ -1.41
IFT140-201ENST00000361339 LCE2AQ5TA79 106 aaPredicted RBP6.17□□□□□ -1.42
IFT140-201ENST00000361339 FSIP2Q5CZC0 6907 aa6.11□□□□□ -1.43
IFT140-201ENST00000361339 KRTAP4-8A0A0G2JLE6 195 aa6.09□□□□□ -1.44
IFT140-201ENST00000361339 KRTAP4-8Q9BYQ9 185 aa6.09□□□□□ -1.44
IFT140-201ENST00000361339 KRTAP19-5Q3LI72 72 aa6.04□□□□□ -1.44
IFT140-201ENST00000361339 SSPOA2VEC9 5147 aa5.97□□□□□ -1.45
IFT140-201ENST00000361339 LCE3CQ5T5A8 94 aa5.83□□□□□ -1.48
IFT140-201ENST00000361339 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
IFT140-201ENST00000361339 KRTAP19-7Q3SYF9 63 aa5.79□□□□□ -1.48
IFT140-201ENST00000361339 KRTAP9-6A8MVA2 160 aa5.78□□□□□ -1.48
IFT140-201ENST00000361339 FCGBPQ9Y6R7 5405 aaPredicted RBP5.68□□□□□ -1.5
IFT140-201ENST00000361339 MUC12Q9UKN1 5478 aa5.65□□□□□ -1.5
IFT140-201ENST00000361339 MT1EP04732 61 aa5.59□□□□□ -1.51
IFT140-201ENST00000361339 MT1LQ93083 61 aa5.58□□□□□ -1.52
IFT140-201ENST00000361339 KRTAP19-6Q3LI70 58 aa5.54□□□□□ -1.52
IFT140-201ENST00000361339 KRTAP2-3P0C7H8 128 aa5.5□□□□□ -1.53
IFT140-201ENST00000361339 KRTAP2-4Q9BYR9 128 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms