RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 PKHD1L1Q86WI1 4243 aa4.02□□□□□ -1.77
CLCN3-202ENST00000360642 A6NED7 52 aa4.02□□□□□ -1.77
CLCN3-202ENST00000360642 KMT2CQ8NEZ4 4911 aaKnown RBP4.02□□□□□ -1.77
CLCN3-202ENST00000360642 LINC00304Q8N9R0 145 aa4.01□□□□□ -1.77
CLCN3-202ENST00000360642 A0A1B0GVY2 172 aa4.01□□□□□ -1.77
CLCN3-202ENST00000360642 CDC42SE1Q9NRR8 79 aa4□□□□□ -1.77
CLCN3-202ENST00000360642 APOBP04114 4563 aaKnown RBP4□□□□□ -1.77
CLCN3-202ENST00000360642 KRTAP10-4P60372 401 aaPredicted RBP4□□□□□ -1.77
CLCN3-202ENST00000360642 KRTAP4-7Q9BYR0 210 aa4□□□□□ -1.77
CLCN3-202ENST00000360642 SPINK7P58062 85 aa3.99□□□□□ -1.77
CLCN3-202ENST00000360642 ATP11AUNQ6ZP68 121 aa3.99□□□□□ -1.77
CLCN3-202ENST00000360642 CAMK2N1Q7Z7J9 78 aa3.97□□□□□ -1.77
CLCN3-202ENST00000360642 PMAIP1Q13794 54 aa3.97□□□□□ -1.77
CLCN3-202ENST00000360642 RYR2Q92736 4967 aa3.96□□□□□ -1.78
CLCN3-202ENST00000360642 LUZP6Q538Z0 58 aa3.96□□□□□ -1.78
CLCN3-202ENST00000360642 ADM2Q7Z4H4 148 aa3.95□□□□□ -1.78
CLCN3-202ENST00000360642 SPTSSBQ8NFR3 76 aa3.95□□□□□ -1.78
CLCN3-202ENST00000360642 LRP1Q07954 4544 aaKnown RBP3.95□□□□□ -1.78
CLCN3-202ENST00000360642 C7orf65Q6ZTY9 151 aa3.95□□□□□ -1.78
CLCN3-202ENST00000360642 C20orf166-AS1Q96NR2 134 aa3.94□□□□□ -1.78
CLCN3-202ENST00000360642 C9orf92A6NGG3 77 aa3.94□□□□□ -1.78
CLCN3-202ENST00000360642 A6NN06 94 aa3.93□□□□□ -1.78
CLCN3-202ENST00000360642 A8MUU9 505 aa3.93□□□□□ -1.78
CLCN3-202ENST00000360642 KRTAP9-8Q9BYQ0 159 aa3.93□□□□□ -1.78
CLCN3-202ENST00000360642 A0A1B0GU69 56 aa3.93□□□□□ -1.78
CLCN3-202ENST00000360642 MYCBP2O75592 4640 aa3.91□□□□□ -1.78
CLCN3-202ENST00000360642 RYR3Q15413 4870 aa3.9□□□□□ -1.79
CLCN3-202ENST00000360642 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.79
CLCN3-202ENST00000360642 KTN1-AS1Q86SY8 53 aa3.89□□□□□ -1.79
CLCN3-202ENST00000360642 SPATA8Q6RVD6 105 aa3.89□□□□□ -1.79
CLCN3-202ENST00000360642 TNXBP22105 4242 aa3.88□□□□□ -1.79
CLCN3-202ENST00000360642 KRTAP2-2Q9BYT5 123 aa3.88□□□□□ -1.79
CLCN3-202ENST00000360642 LCE3CQ5T5A8 94 aa3.87□□□□□ -1.79
CLCN3-202ENST00000360642 FLG2Q5D862 2391 aaPredicted RBP3.86□□□□□ -1.79
CLCN3-202ENST00000360642 UQCR11O14957 56 aa3.86□□□□□ -1.79
CLCN3-202ENST00000360642 FAT3Q8TDW7 4589 aa3.85□□□□□ -1.79
CLCN3-202ENST00000360642 KRTAP4-5Q9BYR2 181 aa3.85□□□□□ -1.79
CLCN3-202ENST00000360642 MIR22HGQ0VDD5 57 aa3.84□□□□□ -1.79
CLCN3-202ENST00000360642 HSPG2P98160 4391 aa3.84□□□□□ -1.8
CLCN3-202ENST00000360642 KRTAP10-8P60410 259 aa3.83□□□□□ -1.8
CLCN3-202ENST00000360642 DMBT1Q9UGM3 2413 aaPredicted RBP3.83□□□□□ -1.8
CLCN3-202ENST00000360642 KIAA1109Q2LD37 5005 aa3.83□□□□□ -1.8
CLCN3-202ENST00000360642 KRTAP17-1Q9BYP8 105 aa3.81□□□□□ -1.8
CLCN3-202ENST00000360642 Q5VSD8 79 aa3.79□□□□□ -1.8
CLCN3-202ENST00000360642 COX6B2Q6YFQ2 88 aa3.79□□□□□ -1.8
CLCN3-202ENST00000360642 LPAP08519 4548 aa3.78□□□□□ -1.8
CLCN3-202ENST00000360642 RYR1P21817 5038 aa3.78□□□□□ -1.8
CLCN3-202ENST00000360642 EPPK1P58107 5090 aaKnown RBP3.77□□□□□ -1.81
CLCN3-202ENST00000360642 H0YAA0 97 aa3.76□□□□□ -1.81
CLCN3-202ENST00000360642 RPL37P61927 97 aaKnown RBP3.76□□□□□ -1.81
CLCN3-202ENST00000360642 MT3P25713 68 aa3.74□□□□□ -1.81
CLCN3-202ENST00000360642 A0A1B0GU33 70 aa3.73□□□□□ -1.81
CLCN3-202ENST00000360642 H1FX-AS1Q4G0G2 97 aa3.72□□□□□ -1.81
CLCN3-202ENST00000360642 MT1HL1P0DM35 61 aa3.72□□□□□ -1.81
CLCN3-202ENST00000360642 LRP2P98164 4655 aa3.71□□□□□ -1.82
CLCN3-202ENST00000360642 ABCA13Q86UQ4 5058 aa3.71□□□□□ -1.82
CLCN3-202ENST00000360642 KRTAP10-6P60371 365 aaPredicted RBP3.66□□□□□ -1.82
CLCN3-202ENST00000360642 S4R3F8 94 aa3.64□□□□□ -1.83
CLCN3-202ENST00000360642 KRTAP10-12P60413 245 aa3.62□□□□□ -1.83
CLCN3-202ENST00000360642 TPRXLQ17RH7 258 aa3.62□□□□□ -1.83
CLCN3-202ENST00000360642 CSAG1Q6PB30 78 aa3.62□□□□□ -1.83
CLCN3-202ENST00000360642 KRTAP13-4Q3LI77 160 aa3.61□□□□□ -1.83
CLCN3-202ENST00000360642 CRIPTQ9P021 101 aa3.6□□□□□ -1.83
CLCN3-202ENST00000360642 K7ERS5 55 aa3.59□□□□□ -1.83
CLCN3-202ENST00000360642 LINC01554Q52M75 96 aa3.59□□□□□ -1.83
CLCN3-202ENST00000360642 LCE3EQ5T5B0 92 aa3.59□□□□□ -1.83
CLCN3-202ENST00000360642 A0A0D9SG42 100 aa3.58□□□□□ -1.84
CLCN3-202ENST00000360642 P0C880 135 aa3.57□□□□□ -1.84
CLCN3-202ENST00000360642 KRTAP25-1Q3LHN0 102 aa3.55□□□□□ -1.84
CLCN3-202ENST00000360642 MUC2Q02817 5179 aa3.53□□□□□ -1.84
CLCN3-202ENST00000360642 HERC2O95714 4834 aa3.52□□□□□ -1.85
CLCN3-202ENST00000360642 ROMO1P60602 79 aa3.51□□□□□ -1.85
CLCN3-202ENST00000360642 MUC17Q685J3 4493 aa3.49□□□□□ -1.85
CLCN3-202ENST00000360642 KRTAP12-2P59991 146 aa3.48□□□□□ -1.85
CLCN3-202ENST00000360642 M0QZ58 72 aa3.47□□□□□ -1.85
CLCN3-202ENST00000360642 KRTAP12-1P59990 96 aa3.46□□□□□ -1.86
CLCN3-202ENST00000360642 R4GN34 69 aa3.46□□□□□ -1.86
CLCN3-202ENST00000360642 KRTAP4-1Q9BYQ7 146 aa3.44□□□□□ -1.86
CLCN3-202ENST00000360642 HERC1Q15751 4861 aa3.43□□□□□ -1.86
CLCN3-202ENST00000360642 BIRC6Q9NR09 4857 aa3.43□□□□□ -1.86
CLCN3-202ENST00000360642 C10orf95Q9H7T3 257 aa3.43□□□□□ -1.86
CLCN3-202ENST00000360642 SPINT4Q6UDR6 99 aa3.42□□□□□ -1.86
CLCN3-202ENST00000360642 PCLOQ9Y6V0 5065 aa3.42□□□□□ -1.86
CLCN3-202ENST00000360642 KRTAP19-2Q3LHN2 52 aa3.42□□□□□ -1.86
CLCN3-202ENST00000360642 FAT4Q6V0I7 4981 aa3.38□□□□□ -1.87
CLCN3-202ENST00000360642 FLGP20930 4061 aaPredicted RBP3.31□□□□□ -1.88
CLCN3-202ENST00000360642 RNF213Q63HN8 5207 aa3.31□□□□□ -1.88
CLCN3-202ENST00000360642 KRTAP5-3Q6L8H2 238 aa3.3□□□□□ -1.88
CLCN3-202ENST00000360642 HMCN2Q8NDA2 5059 aa3.29□□□□□ -1.88
CLCN3-202ENST00000360642 KRTAP10-5P60370 271 aa3.25□□□□□ -1.89
CLCN3-202ENST00000360642 UBR4Q5T4S7 5183 aa3.25□□□□□ -1.89
CLCN3-202ENST00000360642 LCE3DQ9BYE3 92 aa3.15□□□□□ -1.9
CLCN3-202ENST00000360642 PP632Q6XCG6 107 aa3.14□□□□□ -1.91
CLCN3-202ENST00000360642 SPRR2GQ9BYE4 73 aa3.13□□□□□ -1.91
CLCN3-202ENST00000360642 MT1HP80294 61 aa3.11□□□□□ -1.91
CLCN3-202ENST00000360642 PLAC4Q8WY50 150 aa3.1□□□□□ -1.91
CLCN3-202ENST00000360642 M0R2T5 61 aa3.08□□□□□ -1.92
CLCN3-202ENST00000360642 TNP1P09430 55 aa3.08□□□□□ -1.92
CLCN3-202ENST00000360642 LCE1EQ5T753 118 aa3.06□□□□□ -1.92
CLCN3-202ENST00000360642 MT2AP02795 61 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms