RNA–Protein interactions for RNA: ENST00000360428.8

DSC3-201, Transcript of desmocollin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSC3, Length 6,939 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSC3-201ENST00000360428 KRTAP10-8P60410 259 aa3.16□□□□□ -1.9
DSC3-201ENST00000360428 DNAH11Q96DT5 4516 aa3.14□□□□□ -1.91
DSC3-201ENST00000360428 MEGF8Q7Z7M0 2845 aa3.14□□□□□ -1.91
DSC3-201ENST00000360428 PRO2289Q9P1D8 64 aa3.13□□□□□ -1.91
DSC3-201ENST00000360428 DNAH5Q8TE73 4624 aa3.12□□□□□ -1.91
DSC3-201ENST00000360428 XP32Q5T750 250 aa3.11□□□□□ -1.91
DSC3-201ENST00000360428 PKHD1P08F94 4074 aa3.1□□□□□ -1.91
DSC3-201ENST00000360428 TGP01266 2768 aa3.08□□□□□ -1.92
DSC3-201ENST00000360428 TPRXLQ17RH7 258 aa3.08□□□□□ -1.92
DSC3-201ENST00000360428 VPS13BQ7Z7G8 4022 aa3.08□□□□□ -1.92
DSC3-201ENST00000360428 KRTAP1-4P0C5Y4 121 aa3.06□□□□□ -1.92
DSC3-201ENST00000360428 LRP1BQ9NZR2 4599 aa3.05□□□□□ -1.92
DSC3-201ENST00000360428 A0A1B0GVY2 172 aa3.03□□□□□ -1.92
DSC3-201ENST00000360428 SACSQ9NZJ4 4579 aa3.02□□□□□ -1.93
DSC3-201ENST00000360428 KRTAP10-10P60014 251 aa3.02□□□□□ -1.93
DSC3-201ENST00000360428 KMT2CQ8NEZ4 4911 aaKnown RBP3.01□□□□□ -1.93
DSC3-201ENST00000360428 KRTAP13-4Q3LI77 160 aa2.99□□□□□ -1.93
DSC3-201ENST00000360428 KRTAP13-3Q3SY46 172 aa2.99□□□□□ -1.93
DSC3-201ENST00000360428 KRTAP12-2P59991 146 aa2.95□□□□□ -1.94
DSC3-201ENST00000360428 RYR3Q15413 4870 aa2.93□□□□□ -1.94
DSC3-201ENST00000360428 PKHD1L1Q86WI1 4243 aa2.92□□□□□ -1.94
DSC3-201ENST00000360428 INE1O15225 51 aa2.92□□□□□ -1.94
DSC3-201ENST00000360428 KRTAP12-1P59990 96 aa2.9□□□□□ -1.94
DSC3-201ENST00000360428 MYCBP2O75592 4640 aa2.87□□□□□ -1.95
DSC3-201ENST00000360428 KRTAP15-1Q3LI76 137 aa2.87□□□□□ -1.95
DSC3-201ENST00000360428 RYR2Q92736 4967 aa2.86□□□□□ -1.95
DSC3-201ENST00000360428 LPAP08519 4548 aa2.85□□□□□ -1.95
DSC3-201ENST00000360428 FAT1Q14517 4588 aa2.85□□□□□ -1.95
DSC3-201ENST00000360428 APOBP04114 4563 aaKnown RBP2.85□□□□□ -1.95
DSC3-201ENST00000360428 HSPG2P98160 4391 aa2.85□□□□□ -1.95
DSC3-201ENST00000360428 RYR1P21817 5038 aa2.82□□□□□ -1.96
DSC3-201ENST00000360428 LRP1Q07954 4544 aaKnown RBP2.81□□□□□ -1.96
DSC3-201ENST00000360428 ABCA13Q86UQ4 5058 aa2.81□□□□□ -1.96
DSC3-201ENST00000360428 FAT3Q8TDW7 4589 aa2.81□□□□□ -1.96
DSC3-201ENST00000360428 DYNC1H1Q14204 4646 aaKnown RBP2.81□□□□□ -1.96
DSC3-201ENST00000360428 TNXBP22105 4242 aa2.8□□□□□ -1.96
DSC3-201ENST00000360428 EPPK1P58107 5090 aaKnown RBP2.78□□□□□ -1.96
DSC3-201ENST00000360428 KRTAP3-1Q9BYR8 98 aa2.77□□□□□ -1.97
DSC3-201ENST00000360428 KRTAP10-6P60371 365 aaPredicted RBP2.74□□□□□ -1.97
DSC3-201ENST00000360428 KRTAP3-3Q9BYR6 98 aa2.73□□□□□ -1.97
DSC3-201ENST00000360428 KRTAP3-2Q9BYR7 98 aa2.73□□□□□ -1.97
DSC3-201ENST00000360428 KRTAP23-1A1A580 65 aa2.72□□□□□ -1.97
DSC3-201ENST00000360428 KIAA1109Q2LD37 5005 aa2.68□□□□□ -1.98
DSC3-201ENST00000360428 KRTAP10-12P60413 245 aa2.68□□□□□ -1.98
DSC3-201ENST00000360428 MUC2Q02817 5179 aa2.67□□□□□ -1.98
DSC3-201ENST00000360428 KRTAP17-1Q9BYP8 105 aa2.65□□□□□ -1.98
DSC3-201ENST00000360428 LRP2P98164 4655 aa2.64□□□□□ -1.99
DSC3-201ENST00000360428 KRTAP12-3P60328 96 aa2.6□□□□□ -1.99
DSC3-201ENST00000360428 PCLOQ9Y6V0 5065 aa2.59□□□□□ -1.99
DSC3-201ENST00000360428 CRCT1Q9UGL9 99 aa2.57□□□□□ -2
DSC3-201ENST00000360428 MUC17Q685J3 4493 aa2.55□□□□□ -2
DSC3-201ENST00000360428 LCE3AQ5TA76 89 aa2.54□□□□□ -2
DSC3-201ENST00000360428 HERC1Q15751 4861 aa2.53□□□□□ -2.01
DSC3-201ENST00000360428 MT1HL1P0DM35 61 aa2.51□□□□□ -2.01
DSC3-201ENST00000360428 KRTAP10-4P60372 401 aaPredicted RBP2.5□□□□□ -2.01
DSC3-201ENST00000360428 FLGP20930 4061 aaPredicted RBP2.5□□□□□ -2.01
DSC3-201ENST00000360428 FAT4Q6V0I7 4981 aa2.5□□□□□ -2.01
DSC3-201ENST00000360428 KRTAP10-5P60370 271 aa2.47□□□□□ -2.01
DSC3-201ENST00000360428 RNF213Q63HN8 5207 aa2.45□□□□□ -2.02
DSC3-201ENST00000360428 BIRC6Q9NR09 4857 aa2.44□□□□□ -2.02
DSC3-201ENST00000360428 KRTAP8-1Q8IUC2 63 aa2.42□□□□□ -2.02
DSC3-201ENST00000360428 HERC2O95714 4834 aa2.42□□□□□ -2.02
DSC3-201ENST00000360428 LCE2DQ5TA82 110 aaPredicted RBP2.42□□□□□ -2.02
DSC3-201ENST00000360428 KRTAP4-5Q9BYR2 181 aa2.41□□□□□ -2.02
DSC3-201ENST00000360428 HMCN2Q8NDA2 5059 aa2.41□□□□□ -2.02
DSC3-201ENST00000360428 UBR4Q5T4S7 5183 aa2.41□□□□□ -2.02
DSC3-201ENST00000360428 LORP23490 312 aaPredicted RBP2.37□□□□□ -2.03
DSC3-201ENST00000360428 KRTAP19-4Q3LI73 84 aa2.37□□□□□ -2.03
DSC3-201ENST00000360428 KRTAP19-2Q3LHN2 52 aa2.3□□□□□ -2.04
DSC3-201ENST00000360428 SPRR2GQ9BYE4 73 aa2.29□□□□□ -2.04
DSC3-201ENST00000360428 KRTAP10-7P60409 375 aaPredicted RBP2.29□□□□□ -2.04
DSC3-201ENST00000360428 LCE3CQ5T5A8 94 aa2.28□□□□□ -2.04
DSC3-201ENST00000360428 KRTAP19-5Q3LI72 72 aa2.24□□□□□ -2.05
DSC3-201ENST00000360428 MT1HP80294 61 aa2.23□□□□□ -2.05
DSC3-201ENST00000360428 USH2AO75445 5202 aa2.2□□□□□ -2.06
DSC3-201ENST00000360428 OBSCNQ5VST9 7968 aa2.2□□□□□ -2.06
DSC3-201ENST00000360428 MT2AP02795 61 aa2.2□□□□□ -2.06
DSC3-201ENST00000360428 KRTAP4-1Q9BYQ7 146 aa2.19□□□□□ -2.06
DSC3-201ENST00000360428 LCE2BO14633 110 aa2.19□□□□□ -2.06
DSC3-201ENST00000360428 SPRR2FQ96RM1 72 aa2.18□□□□□ -2.06
DSC3-201ENST00000360428 MT1FP04733 61 aa2.13□□□□□ -2.07
DSC3-201ENST00000360428 LCE2CQ5TA81 110 aa2.13□□□□□ -2.07
DSC3-201ENST00000360428 KMT2DO14686 5537 aa2.11□□□□□ -2.07
DSC3-201ENST00000360428 KRTAP12-4P60329 112 aa2.09□□□□□ -2.07
DSC3-201ENST00000360428 KRTAP19-8Q3LI54 63 aa2.09□□□□□ -2.07
DSC3-201ENST00000360428 LCE3BQ5TA77 95 aa2.08□□□□□ -2.08
DSC3-201ENST00000360428 SPRR2EP22531 72 aa2.07□□□□□ -2.08
DSC3-201ENST00000360428 SPRR2BP35325 72 aa2.07□□□□□ -2.08
DSC3-201ENST00000360428 SPRR2AP35326 72 aa2.07□□□□□ -2.08
DSC3-201ENST00000360428 SPRR5A0A1B0GTR4 108 aa2.06□□□□□ -2.08
DSC3-201ENST00000360428 LCE3DQ9BYE3 92 aa2.03□□□□□ -2.08
DSC3-201ENST00000360428 SPRR2DP22532 72 aa2.02□□□□□ -2.09
DSC3-201ENST00000360428 LCE3EQ5T5B0 92 aa2.02□□□□□ -2.09
DSC3-201ENST00000360428 SYNE1Q8NF91 8797 aaKnown RBP2.01□□□□□ -2.09
DSC3-201ENST00000360428 MT1GP13640 62 aa2.01□□□□□ -2.09
DSC3-201ENST00000360428 DSTQ03001 7570 aaKnown RBP2.01□□□□□ -2.09
DSC3-201ENST00000360428 MT1XP80297 61 aa2.01□□□□□ -2.09
DSC3-201ENST00000360428 KRTAP19-1Q8IUB9 90 aa1.99□□□□□ -2.09
DSC3-201ENST00000360428 SSPOA2VEC9 5147 aa1.95□□□□□ -2.1
DSC3-201ENST00000360428 MT1BP07438 61 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms