RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 A0A0A0MQY5 61 aa5.76□□□□□ -1.49
SSU72-202ENST00000359060 SACSQ9NZJ4 4579 aa5.74□□□□□ -1.49
SSU72-202ENST00000359060 SEC61BP60468 96 aaKnown RBP5.74□□□□□ -1.49
SSU72-202ENST00000359060 ROMO1P60602 79 aa5.68□□□□□ -1.5
SSU72-202ENST00000359060 R4GN34 69 aa5.67□□□□□ -1.5
SSU72-202ENST00000359060 PKD1P98161 4303 aa5.67□□□□□ -1.5
SSU72-202ENST00000359060 P0C880 135 aa5.67□□□□□ -1.5
SSU72-202ENST00000359060 TPRXLQ17RH7 258 aa5.66□□□□□ -1.5
SSU72-202ENST00000359060 M0QZ58 72 aa5.66□□□□□ -1.5
SSU72-202ENST00000359060 MT1HL1P0DM35 61 aa5.65□□□□□ -1.5
SSU72-202ENST00000359060 MYCBP2O75592 4640 aa5.65□□□□□ -1.5
SSU72-202ENST00000359060 APOBP04114 4563 aaKnown RBP5.65□□□□□ -1.51
SSU72-202ENST00000359060 LRP1Q07954 4544 aaKnown RBP5.64□□□□□ -1.51
SSU72-202ENST00000359060 LUZP6Q538Z0 58 aa5.62□□□□□ -1.51
SSU72-202ENST00000359060 KRTAP25-1Q3LHN0 102 aa5.61□□□□□ -1.51
SSU72-202ENST00000359060 KIAA1109Q2LD37 5005 aa5.61□□□□□ -1.51
SSU72-202ENST00000359060 NDUFAF8A1L188 74 aa5.6□□□□□ -1.51
SSU72-202ENST00000359060 KMT2CQ8NEZ4 4911 aaKnown RBP5.58□□□□□ -1.52
SSU72-202ENST00000359060 RYR2Q92736 4967 aa5.56□□□□□ -1.52
SSU72-202ENST00000359060 KRTAP10-6P60371 365 aaPredicted RBP5.55□□□□□ -1.52
SSU72-202ENST00000359060 KRTAP4-5Q9BYR2 181 aa5.55□□□□□ -1.52
SSU72-202ENST00000359060 KRTAP3-3Q9BYR6 98 aa5.55□□□□□ -1.52
SSU72-202ENST00000359060 KRTAP13-4Q3LI77 160 aa5.54□□□□□ -1.52
SSU72-202ENST00000359060 RYR1P21817 5038 aa5.53□□□□□ -1.52
SSU72-202ENST00000359060 RYR3Q15413 4870 aa5.53□□□□□ -1.52
SSU72-202ENST00000359060 CAMK2N1Q7Z7J9 78 aa5.53□□□□□ -1.52
SSU72-202ENST00000359060 C10orf95Q9H7T3 257 aa5.49□□□□□ -1.53
SSU72-202ENST00000359060 KRTAP17-1Q9BYP8 105 aa5.49□□□□□ -1.53
SSU72-202ENST00000359060 FAT3Q8TDW7 4589 aa5.49□□□□□ -1.53
SSU72-202ENST00000359060 KRTAP3-2Q9BYR7 98 aa5.47□□□□□ -1.53
SSU72-202ENST00000359060 M0R2T5 61 aa5.46□□□□□ -1.53
SSU72-202ENST00000359060 KRTAP12-2P59991 146 aa5.44□□□□□ -1.54
SSU72-202ENST00000359060 HSPG2P98160 4391 aa5.39□□□□□ -1.55
SSU72-202ENST00000359060 KRTAP12-1P59990 96 aa5.38□□□□□ -1.55
SSU72-202ENST00000359060 LRP2P98164 4655 aa5.33□□□□□ -1.56
SSU72-202ENST00000359060 PKHD1L1Q86WI1 4243 aa5.32□□□□□ -1.56
SSU72-202ENST00000359060 TNXBP22105 4242 aa5.25□□□□□ -1.57
SSU72-202ENST00000359060 LPAP08519 4548 aa5.24□□□□□ -1.57
SSU72-202ENST00000359060 KRTAP4-1Q9BYQ7 146 aa5.22□□□□□ -1.57
SSU72-202ENST00000359060 EPPK1P58107 5090 aaKnown RBP5.22□□□□□ -1.57
SSU72-202ENST00000359060 LORP23490 312 aaPredicted RBP5.19□□□□□ -1.58
SSU72-202ENST00000359060 PLAC4Q8WY50 150 aa5.19□□□□□ -1.58
SSU72-202ENST00000359060 HERC2O95714 4834 aa5.16□□□□□ -1.58
SSU72-202ENST00000359060 TNP1P09430 55 aa5.12□□□□□ -1.59
SSU72-202ENST00000359060 ABCA13Q86UQ4 5058 aa5.08□□□□□ -1.6
SSU72-202ENST00000359060 KRTAP10-10P60014 251 aa5.08□□□□□ -1.6
SSU72-202ENST00000359060 PP632Q6XCG6 107 aa5.02□□□□□ -1.61
SSU72-202ENST00000359060 MUC2Q02817 5179 aa4.96□□□□□ -1.62
SSU72-202ENST00000359060 BIRC6Q9NR09 4857 aa4.91□□□□□ -1.62
SSU72-202ENST00000359060 KRTAP15-1Q3LI76 137 aa4.9□□□□□ -1.63
SSU72-202ENST00000359060 HERC1Q15751 4861 aa4.82□□□□□ -1.64
SSU72-202ENST00000359060 KRTAP19-2Q3LHN2 52 aa4.8□□□□□ -1.64
SSU72-202ENST00000359060 MT1HP80294 61 aa4.77□□□□□ -1.65
SSU72-202ENST00000359060 MUC17Q685J3 4493 aa4.75□□□□□ -1.65
SSU72-202ENST00000359060 FLGP20930 4061 aaPredicted RBP4.7□□□□□ -1.66
SSU72-202ENST00000359060 MT2AP02795 61 aa4.7□□□□□ -1.66
SSU72-202ENST00000359060 FAT4Q6V0I7 4981 aa4.7□□□□□ -1.66
SSU72-202ENST00000359060 LCE2CQ5TA81 110 aa4.7□□□□□ -1.66
SSU72-202ENST00000359060 PCLOQ9Y6V0 5065 aa4.69□□□□□ -1.66
SSU72-202ENST00000359060 RNF213Q63HN8 5207 aa4.69□□□□□ -1.66
SSU72-202ENST00000359060 MT1FP04733 61 aa4.69□□□□□ -1.66
SSU72-202ENST00000359060 SPRR2GQ9BYE4 73 aa4.69□□□□□ -1.66
SSU72-202ENST00000359060 PRO2289Q9P1D8 64 aa4.68□□□□□ -1.66
SSU72-202ENST00000359060 KRTAP19-1Q8IUB9 90 aa4.65□□□□□ -1.66
SSU72-202ENST00000359060 LCE3AQ5TA76 89 aa4.64□□□□□ -1.67
SSU72-202ENST00000359060 HMCN2Q8NDA2 5059 aa4.62□□□□□ -1.67
SSU72-202ENST00000359060 UBR4Q5T4S7 5183 aa4.59□□□□□ -1.67
SSU72-202ENST00000359060 KRTAP23-1A1A580 65 aa4.57□□□□□ -1.68
SSU72-202ENST00000359060 KRTAP10-12P60413 245 aa4.56□□□□□ -1.68
SSU72-202ENST00000359060 KRTAP9-8Q9BYQ0 159 aa4.54□□□□□ -1.68
SSU72-202ENST00000359060 KRTAP12-3P60328 96 aa4.49□□□□□ -1.69
SSU72-202ENST00000359060 KRTAP19-8Q3LI54 63 aa4.44□□□□□ -1.7
SSU72-202ENST00000359060 MT1BP07438 61 aa4.43□□□□□ -1.7
SSU72-202ENST00000359060 LCE2DQ5TA82 110 aaPredicted RBP4.43□□□□□ -1.7
SSU72-202ENST00000359060 MT1XP80297 61 aa4.39□□□□□ -1.71
SSU72-202ENST00000359060 KRTAP10-5P60370 271 aa4.38□□□□□ -1.71
SSU72-202ENST00000359060 KRTAP10-7P60409 375 aaPredicted RBP4.36□□□□□ -1.71
SSU72-202ENST00000359060 KRTAP8-1Q8IUC2 63 aa4.35□□□□□ -1.71
SSU72-202ENST00000359060 KRTAP9-3Q9BYQ3 159 aa4.35□□□□□ -1.71
SSU72-202ENST00000359060 FSIP2Q5CZC0 6907 aa4.26□□□□□ -1.73
SSU72-202ENST00000359060 KRTAP19-5Q3LI72 72 aa4.24□□□□□ -1.73
SSU72-202ENST00000359060 OBSCNQ5VST9 7968 aa4.23□□□□□ -1.73
SSU72-202ENST00000359060 LCE2BO14633 110 aa4.23□□□□□ -1.73
SSU72-202ENST00000359060 SPRR5A0A1B0GTR4 108 aa4.22□□□□□ -1.73
SSU72-202ENST00000359060 KRTAP4-8A0A0G2JLE6 195 aa4.17□□□□□ -1.74
SSU72-202ENST00000359060 KRTAP4-8Q9BYQ9 185 aa4.17□□□□□ -1.74
SSU72-202ENST00000359060 SYNE1Q8NF91 8797 aaKnown RBP4.16□□□□□ -1.74
SSU72-202ENST00000359060 INE1O15225 51 aa4.16□□□□□ -1.74
SSU72-202ENST00000359060 USH2AO75445 5202 aa4.14□□□□□ -1.75
SSU72-202ENST00000359060 CRCT1Q9UGL9 99 aa4.13□□□□□ -1.75
SSU72-202ENST00000359060 LCE3CQ5T5A8 94 aa4.1□□□□□ -1.75
SSU72-202ENST00000359060 LCE2AQ5TA79 106 aaPredicted RBP4.08□□□□□ -1.76
SSU72-202ENST00000359060 KMT2DO14686 5537 aa4.02□□□□□ -1.77
SSU72-202ENST00000359060 KRTAP9-6A0A140TA67 174 aa3.97□□□□□ -1.77
SSU72-202ENST00000359060 KRTAP4-7Q9BYR0 210 aa3.96□□□□□ -1.78
SSU72-202ENST00000359060 KRTAP9-2Q9BYQ4 174 aa3.95□□□□□ -1.78
SSU72-202ENST00000359060 KRTAP19-7Q3SYF9 63 aa3.87□□□□□ -1.79
SSU72-202ENST00000359060 SPRR2FQ96RM1 72 aa3.84□□□□□ -1.79
SSU72-202ENST00000359060 MT1LQ93083 61 aa3.84□□□□□ -1.79
SSU72-202ENST00000359060 MT1EP04732 61 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms