RNA–Protein interactions for RNA: ENST00000358994.8

PTPA-206, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-206ENST00000358994 A0A0D9SG42 100 aa9.44□□□□□ -0.9
PTPA-206ENST00000358994 C10orf95Q9H7T3 257 aa9.43□□□□□ -0.9
PTPA-206ENST00000358994 DMBT1Q9UGM3 2413 aaPredicted RBP9.43□□□□□ -0.9
PTPA-206ENST00000358994 KRTAP15-1Q3LI76 137 aa9.38□□□□□ -0.91
PTPA-206ENST00000358994 KRTAP3-3Q9BYR6 98 aa9.37□□□□□ -0.91
PTPA-206ENST00000358994 KRTAP3-2Q9BYR7 98 aa9.36□□□□□ -0.91
PTPA-206ENST00000358994 NDUFAF8A1L188 74 aa9.35□□□□□ -0.91
PTPA-206ENST00000358994 PKHD1L1Q86WI1 4243 aa9.35□□□□□ -0.91
PTPA-206ENST00000358994 KIAA1109Q2LD37 5005 aa9.25□□□□□ -0.93
PTPA-206ENST00000358994 S4R3F8 94 aa9.23□□□□□ -0.93
PTPA-206ENST00000358994 SMR3BP02814 79 aaPredicted RBP9.21□□□□□ -0.94
PTPA-206ENST00000358994 KRTAP12-2P59991 146 aa9.21□□□□□ -0.94
PTPA-206ENST00000358994 DYNC1H1Q14204 4646 aaKnown RBP9.21□□□□□ -0.94
PTPA-206ENST00000358994 FAT1Q14517 4588 aa9.17□□□□□ -0.94
PTPA-206ENST00000358994 APOBP04114 4563 aaKnown RBP9.17□□□□□ -0.94
PTPA-206ENST00000358994 KRTAP10-8P60410 259 aa9.11□□□□□ -0.95
PTPA-206ENST00000358994 A0A1B0GVY2 172 aa9.09□□□□□ -0.95
PTPA-206ENST00000358994 KRTAP12-1P59990 96 aa9.08□□□□□ -0.96
PTPA-206ENST00000358994 KRTAP10-4P60372 401 aaPredicted RBP9.07□□□□□ -0.96
PTPA-206ENST00000358994 HSPG2P98160 4391 aa9.06□□□□□ -0.96
PTPA-206ENST00000358994 XP32Q5T750 250 aa9.05□□□□□ -0.96
PTPA-206ENST00000358994 LRP1Q07954 4544 aaKnown RBP9.02□□□□□ -0.97
PTPA-206ENST00000358994 FAT3Q8TDW7 4589 aa9.02□□□□□ -0.97
PTPA-206ENST00000358994 BIRC6Q9NR09 4857 aa9.02□□□□□ -0.97
PTPA-206ENST00000358994 KRTAP17-1Q9BYP8 105 aa9.01□□□□□ -0.97
PTPA-206ENST00000358994 RYR1P21817 5038 aa8.97□□□□□ -0.97
PTPA-206ENST00000358994 MYCBP2O75592 4640 aa8.9□□□□□ -0.98
PTPA-206ENST00000358994 TNXBP22105 4242 aa8.9□□□□□ -0.99
PTPA-206ENST00000358994 KRTAP4-5Q9BYR2 181 aa8.88□□□□□ -0.99
PTPA-206ENST00000358994 ABCA13Q86UQ4 5058 aa8.88□□□□□ -0.99
PTPA-206ENST00000358994 PCLOQ9Y6V0 5065 aa8.87□□□□□ -0.99
PTPA-206ENST00000358994 M0QZ58 72 aa8.82□□□□□ -1
PTPA-206ENST00000358994 HERC2O95714 4834 aa8.8□□□□□ -1
PTPA-206ENST00000358994 Q5VSD8 79 aa8.71□□□□□ -1.02
PTPA-206ENST00000358994 LPAP08519 4548 aa8.69□□□□□ -1.02
PTPA-206ENST00000358994 A0A0A0MQY5 61 aa8.68□□□□□ -1.02
PTPA-206ENST00000358994 PLAC4Q8WY50 150 aa8.68□□□□□ -1.02
PTPA-206ENST00000358994 HERC1Q15751 4861 aa8.61□□□□□ -1.03
PTPA-206ENST00000358994 LUZP6Q538Z0 58 aa8.58□□□□□ -1.04
PTPA-206ENST00000358994 R4GN34 69 aa8.52□□□□□ -1.05
PTPA-206ENST00000358994 LRP2P98164 4655 aa8.5□□□□□ -1.05
PTPA-206ENST00000358994 LORP23490 312 aaPredicted RBP8.4□□□□□ -1.06
PTPA-206ENST00000358994 J3QL48 77 aa8.31□□□□□ -1.08
PTPA-206ENST00000358994 MT1HL1P0DM35 61 aa8.31□□□□□ -1.08
PTPA-206ENST00000358994 PP632Q6XCG6 107 aa8.29□□□□□ -1.08
PTPA-206ENST00000358994 UBR4Q5T4S7 5183 aa8.17□□□□□ -1.1
PTPA-206ENST00000358994 CAMK2N1Q7Z7J9 78 aa8.15□□□□□ -1.1
PTPA-206ENST00000358994 HMCN2Q8NDA2 5059 aa8.12□□□□□ -1.11
PTPA-206ENST00000358994 RNF213Q63HN8 5207 aa8.11□□□□□ -1.11
PTPA-206ENST00000358994 MUC17Q685J3 4493 aa8.1□□□□□ -1.11
PTPA-206ENST00000358994 MUC2Q02817 5179 aa8.09□□□□□ -1.11
PTPA-206ENST00000358994 SPRR5A0A1B0GTR4 108 aa8□□□□□ -1.13
PTPA-206ENST00000358994 KRTAP4-1Q9BYQ7 146 aa7.96□□□□□ -1.14
PTPA-206ENST00000358994 TNP1P09430 55 aa7.9□□□□□ -1.14
PTPA-206ENST00000358994 SEC61BP60468 96 aaKnown RBP7.9□□□□□ -1.14
PTPA-206ENST00000358994 KRTAP19-2Q3LHN2 52 aa7.87□□□□□ -1.15
PTPA-206ENST00000358994 KRTAP23-1A1A580 65 aa7.87□□□□□ -1.15
PTPA-206ENST00000358994 FAT4Q6V0I7 4981 aa7.69□□□□□ -1.18
PTPA-206ENST00000358994 FLGP20930 4061 aaPredicted RBP7.64□□□□□ -1.19
PTPA-206ENST00000358994 PRO2289Q9P1D8 64 aa7.61□□□□□ -1.19
PTPA-206ENST00000358994 LCE3AQ5TA76 89 aa7.48□□□□□ -1.21
PTPA-206ENST00000358994 INE1O15225 51 aa7.41□□□□□ -1.22
PTPA-206ENST00000358994 SPRR2GQ9BYE4 73 aa7.36□□□□□ -1.23
PTPA-206ENST00000358994 KRTAP19-1Q8IUB9 90 aa7.34□□□□□ -1.23
PTPA-206ENST00000358994 KRTAP8-1Q8IUC2 63 aa7.25□□□□□ -1.25
PTPA-206ENST00000358994 LCE2CQ5TA81 110 aa7.16□□□□□ -1.26
PTPA-206ENST00000358994 FSIP2Q5CZC0 6907 aa7.12□□□□□ -1.27
PTPA-206ENST00000358994 KRTAP12-3P60328 96 aa7.07□□□□□ -1.28
PTPA-206ENST00000358994 KRTAP10-12P60413 245 aa7.06□□□□□ -1.28
PTPA-206ENST00000358994 M0R2T5 61 aa7.03□□□□□ -1.28
PTPA-206ENST00000358994 MT1HP80294 61 aa7.02□□□□□ -1.29
PTPA-206ENST00000358994 MT1FP04733 61 aa6.99□□□□□ -1.29
PTPA-206ENST00000358994 KRTAP10-5P60370 271 aa6.99□□□□□ -1.29
PTPA-206ENST00000358994 LCE2AQ5TA79 106 aaPredicted RBP6.98□□□□□ -1.29
PTPA-206ENST00000358994 KRTAP10-10P60014 251 aa6.96□□□□□ -1.3
PTPA-206ENST00000358994 MT1XP80297 61 aa6.96□□□□□ -1.3
PTPA-206ENST00000358994 MT2AP02795 61 aa6.94□□□□□ -1.3
PTPA-206ENST00000358994 KRTAP19-8Q3LI54 63 aa6.94□□□□□ -1.3
PTPA-206ENST00000358994 MT1BP07438 61 aa6.88□□□□□ -1.31
PTPA-206ENST00000358994 USH2AO75445 5202 aa6.85□□□□□ -1.31
PTPA-206ENST00000358994 KRTAP9-8Q9BYQ0 159 aa6.85□□□□□ -1.31
PTPA-206ENST00000358994 KRTAP10-7P60409 375 aaPredicted RBP6.84□□□□□ -1.31
PTPA-206ENST00000358994 LCE3CQ5T5A8 94 aa6.69□□□□□ -1.34
PTPA-206ENST00000358994 KRTAP19-5Q3LI72 72 aa6.62□□□□□ -1.35
PTPA-206ENST00000358994 KRTAP9-2Q9BYQ4 174 aa6.6□□□□□ -1.35
PTPA-206ENST00000358994 KRTAP9-6A8MVA2 160 aa6.57□□□□□ -1.36
PTPA-206ENST00000358994 KRTAP9-3Q9BYQ3 159 aa6.52□□□□□ -1.37
PTPA-206ENST00000358994 SSPOA2VEC9 5147 aa6.48□□□□□ -1.37
PTPA-206ENST00000358994 KRTAP2-3P0C7H8 128 aa6.47□□□□□ -1.37
PTPA-206ENST00000358994 KRTAP2-4Q9BYR9 128 aa6.47□□□□□ -1.37
PTPA-206ENST00000358994 KRTAP2-1Q9BYU5 128 aa6.47□□□□□ -1.37
PTPA-206ENST00000358994 KMT2DO14686 5537 aa6.44□□□□□ -1.38
PTPA-206ENST00000358994 LCE2BO14633 110 aa6.44□□□□□ -1.38
PTPA-206ENST00000358994 LCE2DQ5TA82 110 aaPredicted RBP6.32□□□□□ -1.4
PTPA-206ENST00000358994 KRTAP4-8A0A0G2JLE6 195 aa6.32□□□□□ -1.4
PTPA-206ENST00000358994 KRTAP4-8Q9BYQ9 185 aa6.32□□□□□ -1.4
PTPA-206ENST00000358994 KRTAP4-7Q9BYR0 210 aa6.31□□□□□ -1.4
PTPA-206ENST00000358994 FCGBPQ9Y6R7 5405 aaPredicted RBP6.24□□□□□ -1.41
PTPA-206ENST00000358994 CRCT1Q9UGL9 99 aa6.24□□□□□ -1.41
PTPA-206ENST00000358994 KRTAP19-7Q3SYF9 63 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms