RNA–Protein interactions for RNA: ENST00000358309.3

CX3CR1-201, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

TSL 2 BASIC

Gene CX3CR1, Length 3,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-201ENST00000358309 ROMO1P60602 79 aa3.38□□□□□ -1.87
CX3CR1-201ENST00000358309 A0A0D9SG42 100 aa3.37□□□□□ -1.87
CX3CR1-201ENST00000358309 KRTAP10-8P60410 259 aa3.37□□□□□ -1.87
CX3CR1-201ENST00000358309 MT1HL1P0DM35 61 aa3.36□□□□□ -1.87
CX3CR1-201ENST00000358309 CSAG1Q6PB30 78 aa3.35□□□□□ -1.87
CX3CR1-201ENST00000358309 COX6B2Q6YFQ2 88 aa3.35□□□□□ -1.87
CX3CR1-201ENST00000358309 ZCCHC13Q8WW36 166 aaKnown RBP3.35□□□□□ -1.87
CX3CR1-201ENST00000358309 XP32Q5T750 250 aa3.33□□□□□ -1.88
CX3CR1-201ENST00000358309 TP53AIP1Q9HCN2 124 aa3.33□□□□□ -1.88
CX3CR1-201ENST00000358309 CRIPTQ9P021 101 aa3.32□□□□□ -1.88
CX3CR1-201ENST00000358309 MIR22HGQ0VDD5 57 aa3.31□□□□□ -1.88
CX3CR1-201ENST00000358309 SPATA8Q6RVD6 105 aa3.3□□□□□ -1.88
CX3CR1-201ENST00000358309 BIRC6Q9NR09 4857 aa3.29□□□□□ -1.88
CX3CR1-201ENST00000358309 HMCN2Q8NDA2 5059 aa3.29□□□□□ -1.88
CX3CR1-201ENST00000358309 TNXBP22105 4242 aa3.29□□□□□ -1.88
CX3CR1-201ENST00000358309 P0C880 135 aa3.29□□□□□ -1.88
CX3CR1-201ENST00000358309 H3BPC8 53 aa3.28□□□□□ -1.88
CX3CR1-201ENST00000358309 M0R2T5 61 aa3.28□□□□□ -1.88
CX3CR1-201ENST00000358309 ACYP2P14621 99 aa3.27□□□□□ -1.89
CX3CR1-201ENST00000358309 LUZP6Q538Z0 58 aa3.27□□□□□ -1.89
CX3CR1-201ENST00000358309 LINC01558Q9Y6Z2 57 aa3.26□□□□□ -1.89
CX3CR1-201ENST00000358309 A0A1B0GU69 56 aa3.26□□□□□ -1.89
CX3CR1-201ENST00000358309 KRTAP13-3Q3SY46 172 aa3.25□□□□□ -1.89
CX3CR1-201ENST00000358309 KRTAP3-1Q9BYR8 98 aa3.24□□□□□ -1.89
CX3CR1-201ENST00000358309 SPANXA2-OT1Q8N9U9 137 aa3.22□□□□□ -1.89
CX3CR1-201ENST00000358309 KRTAP4-1Q9BYQ7 146 aa3.22□□□□□ -1.89
CX3CR1-201ENST00000358309 USH2AO75445 5202 aa3.22□□□□□ -1.89
CX3CR1-201ENST00000358309 NDUFAF8A1L188 74 aa3.21□□□□□ -1.9
CX3CR1-201ENST00000358309 RPL37P61927 97 aaKnown RBP3.21□□□□□ -1.9
CX3CR1-201ENST00000358309 C20orf166-AS1Q96NR2 134 aa3.21□□□□□ -1.9
CX3CR1-201ENST00000358309 A8MUU9 505 aa3.2□□□□□ -1.9
CX3CR1-201ENST00000358309 SPINT4Q6UDR6 99 aa3.2□□□□□ -1.9
CX3CR1-201ENST00000358309 K7ERS5 55 aa3.2□□□□□ -1.9
CX3CR1-201ENST00000358309 KRTAP25-1Q3LHN0 102 aa3.18□□□□□ -1.9
CX3CR1-201ENST00000358309 RPS29P62273 56 aaKnown RBP3.18□□□□□ -1.9
CX3CR1-201ENST00000358309 DMAC1Q96GE9 116 aa3.17□□□□□ -1.9
CX3CR1-201ENST00000358309 S4R3F8 94 aa3.16□□□□□ -1.9
CX3CR1-201ENST00000358309 A0A1B0GU33 70 aa3.1□□□□□ -1.91
CX3CR1-201ENST00000358309 LORP23490 312 aaPredicted RBP3.1□□□□□ -1.91
CX3CR1-201ENST00000358309 M0QZ58 72 aa3.09□□□□□ -1.92
CX3CR1-201ENST00000358309 UQCR11O14957 56 aa3.09□□□□□ -1.92
CX3CR1-201ENST00000358309 TPRXLQ17RH7 258 aa3.09□□□□□ -1.92
CX3CR1-201ENST00000358309 KRTAP13-4Q3LI77 160 aa3.07□□□□□ -1.92
CX3CR1-201ENST00000358309 H1FX-AS1Q4G0G2 97 aa3.07□□□□□ -1.92
CX3CR1-201ENST00000358309 R4GN34 69 aa3.06□□□□□ -1.92
CX3CR1-201ENST00000358309 MUC17Q685J3 4493 aa3.06□□□□□ -1.92
CX3CR1-201ENST00000358309 KRTAP3-3Q9BYR6 98 aa3.05□□□□□ -1.92
CX3CR1-201ENST00000358309 H0YAA0 97 aa3.04□□□□□ -1.92
CX3CR1-201ENST00000358309 KRTAP15-1Q3LI76 137 aa3.03□□□□□ -1.92
CX3CR1-201ENST00000358309 C10orf95Q9H7T3 257 aa3.03□□□□□ -1.92
CX3CR1-201ENST00000358309 KMT2DO14686 5537 aa3□□□□□ -1.93
CX3CR1-201ENST00000358309 KRTAP10-10P60014 251 aa2.99□□□□□ -1.93
CX3CR1-201ENST00000358309 CAMK2N1Q7Z7J9 78 aa2.99□□□□□ -1.93
CX3CR1-201ENST00000358309 OBSCNQ5VST9 7968 aa2.98□□□□□ -1.93
CX3CR1-201ENST00000358309 KRTAP10-6P60371 365 aaPredicted RBP2.97□□□□□ -1.93
CX3CR1-201ENST00000358309 KRTAP12-2P59991 146 aa2.96□□□□□ -1.94
CX3CR1-201ENST00000358309 LCE2DQ5TA82 110 aaPredicted RBP2.94□□□□□ -1.94
CX3CR1-201ENST00000358309 KRTAP3-2Q9BYR7 98 aa2.94□□□□□ -1.94
CX3CR1-201ENST00000358309 DSTQ03001 7570 aaKnown RBP2.89□□□□□ -1.95
CX3CR1-201ENST00000358309 MT1HP80294 61 aa2.86□□□□□ -1.95
CX3CR1-201ENST00000358309 KRTAP23-1A1A580 65 aa2.86□□□□□ -1.95
CX3CR1-201ENST00000358309 KRTAP12-1P59990 96 aa2.83□□□□□ -1.96
CX3CR1-201ENST00000358309 LCE2CQ5TA81 110 aa2.83□□□□□ -1.96
CX3CR1-201ENST00000358309 MT1FP04733 61 aa2.82□□□□□ -1.96
CX3CR1-201ENST00000358309 KRTAP19-2Q3LHN2 52 aa2.82□□□□□ -1.96
CX3CR1-201ENST00000358309 FLGP20930 4061 aaPredicted RBP2.81□□□□□ -1.96
CX3CR1-201ENST00000358309 SSPOA2VEC9 5147 aa2.8□□□□□ -1.96
CX3CR1-201ENST00000358309 PLAC4Q8WY50 150 aa2.77□□□□□ -1.97
CX3CR1-201ENST00000358309 MT2AP02795 61 aa2.77□□□□□ -1.97
CX3CR1-201ENST00000358309 SYNE2Q8WXH0 6885 aaKnown RBP2.75□□□□□ -1.97
CX3CR1-201ENST00000358309 PRO2289Q9P1D8 64 aa2.75□□□□□ -1.97
CX3CR1-201ENST00000358309 FCGBPQ9Y6R7 5405 aaPredicted RBP2.74□□□□□ -1.97
CX3CR1-201ENST00000358309 SYNE1Q8NF91 8797 aaKnown RBP2.74□□□□□ -1.97
CX3CR1-201ENST00000358309 KRTAP9-8Q9BYQ0 159 aa2.7□□□□□ -1.98
CX3CR1-201ENST00000358309 MUC12Q9UKN1 5478 aa2.7□□□□□ -1.98
CX3CR1-201ENST00000358309 KRTAP19-1Q8IUB9 90 aa2.69□□□□□ -1.98
CX3CR1-201ENST00000358309 MACF1Q9UPN3 7388 aaKnown RBP2.64□□□□□ -1.99
CX3CR1-201ENST00000358309 KRTAP4-8A0A0G2JLE6 195 aa2.64□□□□□ -1.99
CX3CR1-201ENST00000358309 LCE2BO14633 110 aa2.64□□□□□ -1.99
CX3CR1-201ENST00000358309 KRTAP4-8Q9BYQ9 185 aa2.64□□□□□ -1.99
CX3CR1-201ENST00000358309 TNP1P09430 55 aa2.61□□□□□ -1.99
CX3CR1-201ENST00000358309 KRTAP10-7P60409 375 aaPredicted RBP2.59□□□□□ -1.99
CX3CR1-201ENST00000358309 LCE3AQ5TA76 89 aa2.58□□□□□ -2
CX3CR1-201ENST00000358309 CRCT1Q9UGL9 99 aa2.58□□□□□ -2
CX3CR1-201ENST00000358309 MT1BP07438 61 aa2.57□□□□□ -2
CX3CR1-201ENST00000358309 KRTAP9-3Q9BYQ3 159 aa2.57□□□□□ -2
CX3CR1-201ENST00000358309 INE1O15225 51 aa2.54□□□□□ -2
CX3CR1-201ENST00000358309 LCE2AQ5TA79 106 aaPredicted RBP2.53□□□□□ -2.01
CX3CR1-201ENST00000358309 SPRR2GQ9BYE4 73 aa2.53□□□□□ -2.01
CX3CR1-201ENST00000358309 MT1XP80297 61 aa2.51□□□□□ -2.01
CX3CR1-201ENST00000358309 MDN1Q9NU22 5596 aa2.51□□□□□ -2.01
CX3CR1-201ENST00000358309 KRTAP9-6A0A140TA67 174 aa2.51□□□□□ -2.01
CX3CR1-201ENST00000358309 KRTAP10-5P60370 271 aa2.51□□□□□ -2.01
CX3CR1-201ENST00000358309 KRTAP4-7Q9BYR0 210 aa2.5□□□□□ -2.01
CX3CR1-201ENST00000358309 KRTAP10-12P60413 245 aa2.49□□□□□ -2.01
CX3CR1-201ENST00000358309 KRTAP9-2Q9BYQ4 174 aa2.45□□□□□ -2.02
CX3CR1-201ENST00000358309 KRTAP19-5Q3LI72 72 aa2.43□□□□□ -2.02
CX3CR1-201ENST00000358309 KRTAP12-3P60328 96 aa2.41□□□□□ -2.02
CX3CR1-201ENST00000358309 PP632Q6XCG6 107 aa2.41□□□□□ -2.02
CX3CR1-201ENST00000358309 KRTAP4-3Q9BYR4 195 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms