RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 KRTAP10-8P60410 259 aa9.12□□□□□ -0.95
RTN4-204ENST00000357732 KRTAP3-3Q9BYR6 98 aa9.12□□□□□ -0.95
RTN4-204ENST00000357732 KRTAP10-6P60371 365 aaPredicted RBP9.11□□□□□ -0.95
RTN4-204ENST00000357732 ROMO1P60602 79 aa9.08□□□□□ -0.96
RTN4-204ENST00000357732 S4R3F8 94 aa9.06□□□□□ -0.96
RTN4-204ENST00000357732 Q5VSD8 79 aa9.02□□□□□ -0.96
RTN4-204ENST00000357732 KRTAP3-2Q9BYR7 98 aa9.02□□□□□ -0.96
RTN4-204ENST00000357732 XP32Q5T750 250 aa9.02□□□□□ -0.97
RTN4-204ENST00000357732 HSPG2P98160 4391 aa9.02□□□□□ -0.97
RTN4-204ENST00000357732 KRTAP13-4Q3LI77 160 aa8.97□□□□□ -0.97
RTN4-204ENST00000357732 KRTAP17-1Q9BYP8 105 aa8.92□□□□□ -0.98
RTN4-204ENST00000357732 MYCBP2O75592 4640 aa8.9□□□□□ -0.98
RTN4-204ENST00000357732 A0A0D9SG42 100 aa8.88□□□□□ -0.99
RTN4-204ENST00000357732 H3BS24 57 aa8.88□□□□□ -0.99
RTN4-204ENST00000357732 RYR1P21817 5038 aa8.88□□□□□ -0.99
RTN4-204ENST00000357732 DMBT1Q9UGM3 2413 aaPredicted RBP8.87□□□□□ -0.99
RTN4-204ENST00000357732 CRIPTQ9P021 101 aa8.86□□□□□ -0.99
RTN4-204ENST00000357732 RYR3Q15413 4870 aa8.86□□□□□ -0.99
RTN4-204ENST00000357732 P0C880 135 aa8.85□□□□□ -0.99
RTN4-204ENST00000357732 MT1HL1P0DM35 61 aa8.8□□□□□ -1
RTN4-204ENST00000357732 TPRXLQ17RH7 258 aa8.76□□□□□ -1.01
RTN4-204ENST00000357732 M0QZ58 72 aa8.75□□□□□ -1.01
RTN4-204ENST00000357732 KIAA1109Q2LD37 5005 aa8.73□□□□□ -1.01
RTN4-204ENST00000357732 KRTAP12-2P59991 146 aa8.72□□□□□ -1.01
RTN4-204ENST00000357732 KRTAP12-1P59990 96 aa8.7□□□□□ -1.02
RTN4-204ENST00000357732 LPAP08519 4548 aa8.69□□□□□ -1.02
RTN4-204ENST00000357732 SPINT4Q6UDR6 99 aa8.64□□□□□ -1.03
RTN4-204ENST00000357732 LRP2P98164 4655 aa8.6□□□□□ -1.03
RTN4-204ENST00000357732 C10orf95Q9H7T3 257 aa8.59□□□□□ -1.03
RTN4-204ENST00000357732 EPPK1P58107 5090 aaKnown RBP8.55□□□□□ -1.04
RTN4-204ENST00000357732 KRTAP15-1Q3LI76 137 aa8.48□□□□□ -1.05
RTN4-204ENST00000357732 ABCA13Q86UQ4 5058 aa8.47□□□□□ -1.05
RTN4-204ENST00000357732 KRTAP4-5Q9BYR2 181 aa8.43□□□□□ -1.06
RTN4-204ENST00000357732 R4GN34 69 aa8.4□□□□□ -1.06
RTN4-204ENST00000357732 SEC61BP60468 96 aaKnown RBP8.37□□□□□ -1.07
RTN4-204ENST00000357732 BIRC6Q9NR09 4857 aa8.36□□□□□ -1.07
RTN4-204ENST00000357732 MUC17Q685J3 4493 aa8.25□□□□□ -1.09
RTN4-204ENST00000357732 NDUFAF8A1L188 74 aa8.25□□□□□ -1.09
RTN4-204ENST00000357732 KRTAP4-1Q9BYQ7 146 aa8.22□□□□□ -1.09
RTN4-204ENST00000357732 LORP23490 312 aaPredicted RBP8.15□□□□□ -1.1
RTN4-204ENST00000357732 HERC2O95714 4834 aa8.14□□□□□ -1.11
RTN4-204ENST00000357732 J3QL48 77 aa8.12□□□□□ -1.11
RTN4-204ENST00000357732 PP632Q6XCG6 107 aa8.11□□□□□ -1.11
RTN4-204ENST00000357732 KRTAP19-2Q3LHN2 52 aa8.06□□□□□ -1.12
RTN4-204ENST00000357732 PLAC4Q8WY50 150 aa8.06□□□□□ -1.12
RTN4-204ENST00000357732 PCLOQ9Y6V0 5065 aa8.01□□□□□ -1.13
RTN4-204ENST00000357732 CAMK2N1Q7Z7J9 78 aa7.98□□□□□ -1.13
RTN4-204ENST00000357732 MUC2Q02817 5179 aa7.92□□□□□ -1.14
RTN4-204ENST00000357732 KRTAP23-1A1A580 65 aa7.86□□□□□ -1.15
RTN4-204ENST00000357732 FLGP20930 4061 aaPredicted RBP7.83□□□□□ -1.16
RTN4-204ENST00000357732 LUZP6Q538Z0 58 aa7.77□□□□□ -1.17
RTN4-204ENST00000357732 TNP1P09430 55 aa7.76□□□□□ -1.17
RTN4-204ENST00000357732 HERC1Q15751 4861 aa7.7□□□□□ -1.18
RTN4-204ENST00000357732 HMCN2Q8NDA2 5059 aa7.63□□□□□ -1.19
RTN4-204ENST00000357732 SPRR5A0A1B0GTR4 108 aa7.56□□□□□ -1.2
RTN4-204ENST00000357732 LCE2CQ5TA81 110 aa7.56□□□□□ -1.2
RTN4-204ENST00000357732 SPRR2GQ9BYE4 73 aa7.56□□□□□ -1.2
RTN4-204ENST00000357732 FAT4Q6V0I7 4981 aa7.5□□□□□ -1.21
RTN4-204ENST00000357732 A0A0A0MQY5 61 aa7.5□□□□□ -1.21
RTN4-204ENST00000357732 KRTAP19-1Q8IUB9 90 aa7.42□□□□□ -1.22
RTN4-204ENST00000357732 M0R2T5 61 aa7.38□□□□□ -1.23
RTN4-204ENST00000357732 MT1HP80294 61 aa7.35□□□□□ -1.23
RTN4-204ENST00000357732 RNF213Q63HN8 5207 aa7.34□□□□□ -1.23
RTN4-204ENST00000357732 UBR4Q5T4S7 5183 aa7.3□□□□□ -1.24
RTN4-204ENST00000357732 MT1FP04733 61 aa7.26□□□□□ -1.25
RTN4-204ENST00000357732 MT2AP02795 61 aa7.25□□□□□ -1.25
RTN4-204ENST00000357732 KRTAP10-10P60014 251 aa7.24□□□□□ -1.25
RTN4-204ENST00000357732 LCE3AQ5TA76 89 aa7.24□□□□□ -1.25
RTN4-204ENST00000357732 KRTAP19-8Q3LI54 63 aa7.2□□□□□ -1.26
RTN4-204ENST00000357732 KRTAP9-8Q9BYQ0 159 aa7.19□□□□□ -1.26
RTN4-204ENST00000357732 KRTAP8-1Q8IUC2 63 aa7.18□□□□□ -1.26
RTN4-204ENST00000357732 KRTAP10-5P60370 271 aa7.03□□□□□ -1.28
RTN4-204ENST00000357732 MT1BP07438 61 aa7.02□□□□□ -1.29
RTN4-204ENST00000357732 MT1XP80297 61 aa7.01□□□□□ -1.29
RTN4-204ENST00000357732 KRTAP10-12P60413 245 aa6.96□□□□□ -1.3
RTN4-204ENST00000357732 KRTAP12-3P60328 96 aa6.94□□□□□ -1.3
RTN4-204ENST00000357732 KRTAP9-3Q9BYQ3 159 aa6.88□□□□□ -1.31
RTN4-204ENST00000357732 PRO2289Q9P1D8 64 aa6.84□□□□□ -1.31
RTN4-204ENST00000357732 INE1O15225 51 aa6.84□□□□□ -1.31
RTN4-204ENST00000357732 KRTAP10-7P60409 375 aaPredicted RBP6.79□□□□□ -1.32
RTN4-204ENST00000357732 LCE2BO14633 110 aa6.62□□□□□ -1.35
RTN4-204ENST00000357732 LCE2AQ5TA79 106 aaPredicted RBP6.55□□□□□ -1.36
RTN4-204ENST00000357732 LCE3CQ5T5A8 94 aa6.55□□□□□ -1.36
RTN4-204ENST00000357732 KRTAP19-5Q3LI72 72 aa6.54□□□□□ -1.36
RTN4-204ENST00000357732 USH2AO75445 5202 aa6.52□□□□□ -1.37
RTN4-204ENST00000357732 KMT2DO14686 5537 aa6.44□□□□□ -1.38
RTN4-204ENST00000357732 KRTAP19-4Q3LI73 84 aa6.43□□□□□ -1.38
RTN4-204ENST00000357732 KRTAP4-8A0A0G2JLE6 195 aa6.38□□□□□ -1.39
RTN4-204ENST00000357732 KRTAP4-8Q9BYQ9 185 aa6.38□□□□□ -1.39
RTN4-204ENST00000357732 LCE2DQ5TA82 110 aaPredicted RBP6.32□□□□□ -1.4
RTN4-204ENST00000357732 KRTAP19-7Q3SYF9 63 aa6.24□□□□□ -1.41
RTN4-204ENST00000357732 KRTAP9-6A8MVA2 160 aa6.23□□□□□ -1.41
RTN4-204ENST00000357732 KRTAP2-3P0C7H8 128 aa6.2□□□□□ -1.42
RTN4-204ENST00000357732 KRTAP2-4Q9BYR9 128 aa6.2□□□□□ -1.42
RTN4-204ENST00000357732 KRTAP2-1Q9BYU5 128 aa6.2□□□□□ -1.42
RTN4-204ENST00000357732 KRTAP9-2Q9BYQ4 174 aa6.19□□□□□ -1.42
RTN4-204ENST00000357732 KRTAP4-7Q9BYR0 210 aa6.12□□□□□ -1.43
RTN4-204ENST00000357732 MT1LQ93083 61 aa6.09□□□□□ -1.43
RTN4-204ENST00000357732 SSPOA2VEC9 5147 aa6.07□□□□□ -1.44
RTN4-204ENST00000357732 MT1EP04732 61 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms