RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 DNAH5Q8TE73 4624 aa2.82□□□□□ -1.96
BRCA1-203ENST00000357654 MAP1AP78559 2803 aaPredicted RBP2.81□□□□□ -1.96
BRCA1-203ENST00000357654 VWFP04275 2813 aa2.81□□□□□ -1.96
BRCA1-203ENST00000357654 ZANQ9Y493 2812 aa2.81□□□□□ -1.96
BRCA1-203ENST00000357654 PKHD1L1Q86WI1 4243 aa2.81□□□□□ -1.96
BRCA1-203ENST00000357654 PKHD1P08F94 4074 aa2.8□□□□□ -1.96
BRCA1-203ENST00000357654 SACSQ9NZJ4 4579 aa2.8□□□□□ -1.96
BRCA1-203ENST00000357654 HUWE1Q7Z6Z7 4374 aaKnown RBP2.79□□□□□ -1.96
BRCA1-203ENST00000357654 NSD1Q96L73 2696 aaPredicted RBP2.79□□□□□ -1.96
BRCA1-203ENST00000357654 KRTAP13-4Q3LI77 160 aa2.78□□□□□ -1.96
BRCA1-203ENST00000357654 KMT2CQ8NEZ4 4911 aaKnown RBP2.78□□□□□ -1.96
BRCA1-203ENST00000357654 RYR1P21817 5038 aa2.77□□□□□ -1.97
BRCA1-203ENST00000357654 TENM1Q9UKZ4 2725 aa2.77□□□□□ -1.97
BRCA1-203ENST00000357654 COL7A1Q02388 2944 aa2.76□□□□□ -1.97
BRCA1-203ENST00000357654 MEGF8Q7Z7M0 2845 aa2.75□□□□□ -1.97
BRCA1-203ENST00000357654 KRTAP10-5P60370 271 aa2.74□□□□□ -1.97
BRCA1-203ENST00000357654 ALMS1Q8TCU4 4167 aa2.73□□□□□ -1.97
BRCA1-203ENST00000357654 EPPK1P58107 5090 aaKnown RBP2.73□□□□□ -1.97
BRCA1-203ENST00000357654 FBN1P35555 2871 aaKnown RBP2.72□□□□□ -1.97
BRCA1-203ENST00000357654 KRTAP10-12P60413 245 aa2.72□□□□□ -1.97
BRCA1-203ENST00000357654 HIVEP1P15822 2718 aa2.71□□□□□ -1.98
BRCA1-203ENST00000357654 DYNC1H1Q14204 4646 aaKnown RBP2.71□□□□□ -1.98
BRCA1-203ENST00000357654 PKD1L1Q8TDX9 2849 aa2.7□□□□□ -1.98
BRCA1-203ENST00000357654 VPS13BQ7Z7G8 4022 aa2.69□□□□□ -1.98
BRCA1-203ENST00000357654 LRP1BQ9NZR2 4599 aa2.69□□□□□ -1.98
BRCA1-203ENST00000357654 ABCA13Q86UQ4 5058 aa2.68□□□□□ -1.98
BRCA1-203ENST00000357654 APOBP04114 4563 aaKnown RBP2.68□□□□□ -1.98
BRCA1-203ENST00000357654 PCLOQ9Y6V0 5065 aa2.68□□□□□ -1.98
BRCA1-203ENST00000357654 KRTAP8-1Q8IUC2 63 aa2.67□□□□□ -1.98
BRCA1-203ENST00000357654 KRTAP12-1P59990 96 aa2.67□□□□□ -1.98
BRCA1-203ENST00000357654 TENM3Q9P273 2699 aa2.66□□□□□ -1.98
BRCA1-203ENST00000357654 KMT2AQ03164 3969 aa2.66□□□□□ -1.98
BRCA1-203ENST00000357654 HSPG2P98160 4391 aa2.65□□□□□ -1.98
BRCA1-203ENST00000357654 ITPR2Q14571 2701 aa2.64□□□□□ -1.99
BRCA1-203ENST00000357654 BIRC6Q9NR09 4857 aa2.64□□□□□ -1.99
BRCA1-203ENST00000357654 HERC2O95714 4834 aa2.63□□□□□ -1.99
BRCA1-203ENST00000357654 KRTAP10-7P60409 375 aaPredicted RBP2.63□□□□□ -1.99
BRCA1-203ENST00000357654 NBEAL2Q6ZNJ1 2754 aa2.61□□□□□ -1.99
BRCA1-203ENST00000357654 KRTAP12-3P60328 96 aa2.57□□□□□ -2
BRCA1-203ENST00000357654 TNXBP22105 4242 aa2.57□□□□□ -2
BRCA1-203ENST00000357654 KRTAP4-5Q9BYR2 181 aa2.56□□□□□ -2
BRCA1-203ENST00000357654 LCE3AQ5TA76 89 aa2.56□□□□□ -2
BRCA1-203ENST00000357654 HMCN2Q8NDA2 5059 aa2.55□□□□□ -2
BRCA1-203ENST00000357654 INE1O15225 51 aa2.55□□□□□ -2
BRCA1-203ENST00000357654 FAT1Q14517 4588 aa2.54□□□□□ -2
BRCA1-203ENST00000357654 TENM2Q9NT68 2774 aa2.53□□□□□ -2
BRCA1-203ENST00000357654 KIAA1109Q2LD37 5005 aa2.52□□□□□ -2.01
BRCA1-203ENST00000357654 SPRR2FQ96RM1 72 aa2.52□□□□□ -2.01
BRCA1-203ENST00000357654 KRTAP3-1Q9BYR8 98 aa2.49□□□□□ -2.01
BRCA1-203ENST00000357654 SPRR2EP22531 72 aa2.45□□□□□ -2.02
BRCA1-203ENST00000357654 SPRR2BP35325 72 aa2.45□□□□□ -2.02
BRCA1-203ENST00000357654 SPRR2AP35326 72 aa2.45□□□□□ -2.02
BRCA1-203ENST00000357654 MYCBP2O75592 4640 aa2.44□□□□□ -2.02
BRCA1-203ENST00000357654 KRTAP3-3Q9BYR6 98 aa2.43□□□□□ -2.02
BRCA1-203ENST00000357654 KRTAP3-2Q9BYR7 98 aa2.43□□□□□ -2.02
BRCA1-203ENST00000357654 LRP1Q07954 4544 aaKnown RBP2.43□□□□□ -2.02
BRCA1-203ENST00000357654 MT1HL1P0DM35 61 aa2.41□□□□□ -2.02
BRCA1-203ENST00000357654 UBR4Q5T4S7 5183 aa2.39□□□□□ -2.03
BRCA1-203ENST00000357654 TGP01266 2768 aa2.38□□□□□ -2.03
BRCA1-203ENST00000357654 SPRR5A0A1B0GTR4 108 aa2.38□□□□□ -2.03
BRCA1-203ENST00000357654 LCE2CQ5TA81 110 aa2.37□□□□□ -2.03
BRCA1-203ENST00000357654 SPRR2DP22532 72 aa2.36□□□□□ -2.03
BRCA1-203ENST00000357654 LCE2DQ5TA82 110 aaPredicted RBP2.36□□□□□ -2.03
BRCA1-203ENST00000357654 KRTAP17-1Q9BYP8 105 aa2.34□□□□□ -2.03
BRCA1-203ENST00000357654 MUC17Q685J3 4493 aa2.34□□□□□ -2.03
BRCA1-203ENST00000357654 KRTAP10-4P60372 401 aaPredicted RBP2.33□□□□□ -2.04
BRCA1-203ENST00000357654 LCE3BQ5TA77 95 aa2.31□□□□□ -2.04
BRCA1-203ENST00000357654 RNF213Q63HN8 5207 aa2.31□□□□□ -2.04
BRCA1-203ENST00000357654 HERC1Q15751 4861 aa2.31□□□□□ -2.04
BRCA1-203ENST00000357654 LRP2P98164 4655 aa2.29□□□□□ -2.04
BRCA1-203ENST00000357654 LCE2BO14633 110 aa2.28□□□□□ -2.04
BRCA1-203ENST00000357654 KRTAP19-5Q3LI72 72 aa2.27□□□□□ -2.05
BRCA1-203ENST00000357654 LPAP08519 4548 aa2.27□□□□□ -2.05
BRCA1-203ENST00000357654 MT1HP80294 61 aa2.27□□□□□ -2.05
BRCA1-203ENST00000357654 SRRM2Q9UQ35 2752 aaKnown RBP2.26□□□□□ -2.05
BRCA1-203ENST00000357654 FLGP20930 4061 aaPredicted RBP2.25□□□□□ -2.05
BRCA1-203ENST00000357654 LCE2AQ5TA79 106 aaPredicted RBP2.23□□□□□ -2.05
BRCA1-203ENST00000357654 KRTAP12-4P60329 112 aa2.21□□□□□ -2.05
BRCA1-203ENST00000357654 FAT4Q6V0I7 4981 aa2.2□□□□□ -2.06
BRCA1-203ENST00000357654 MUC2Q02817 5179 aa2.2□□□□□ -2.06
BRCA1-203ENST00000357654 MT1GP13640 62 aa2.18□□□□□ -2.06
BRCA1-203ENST00000357654 MT4P47944 62 aa2.18□□□□□ -2.06
BRCA1-203ENST00000357654 MT2AP02795 61 aa2.18□□□□□ -2.06
BRCA1-203ENST00000357654 KRTAP23-1A1A580 65 aa2.16□□□□□ -2.06
BRCA1-203ENST00000357654 LCE3CQ5T5A8 94 aa2.16□□□□□ -2.06
BRCA1-203ENST00000357654 KRTAP4-1Q9BYQ7 146 aa2.15□□□□□ -2.07
BRCA1-203ENST00000357654 KRTAP19-2Q3LHN2 52 aa2.14□□□□□ -2.07
BRCA1-203ENST00000357654 MT1FP04733 61 aa2.13□□□□□ -2.07
BRCA1-203ENST00000357654 LCE1BQ5T7P3 118 aa2.1□□□□□ -2.07
BRCA1-203ENST00000357654 LCE3EQ5T5B0 92 aa2.1□□□□□ -2.07
BRCA1-203ENST00000357654 LCE1DQ5T752 114 aa2.05□□□□□ -2.08
BRCA1-203ENST00000357654 USH2AO75445 5202 aa2.03□□□□□ -2.08
BRCA1-203ENST00000357654 KRTAP19-1Q8IUB9 90 aa2.03□□□□□ -2.08
BRCA1-203ENST00000357654 LCE3DQ9BYE3 92 aa2.03□□□□□ -2.09
BRCA1-203ENST00000357654 SPRR2GQ9BYE4 73 aa2.02□□□□□ -2.09
BRCA1-203ENST00000357654 GPR98Q8WXG9 6306 aa2.02□□□□□ -2.09
BRCA1-203ENST00000357654 LCE5AQ5TCM9 118 aa2.01□□□□□ -2.09
BRCA1-203ENST00000357654 SSPOA2VEC9 5147 aa1.99□□□□□ -2.09
BRCA1-203ENST00000357654 KRTAP4-8A0A0G2JLE6 195 aa1.99□□□□□ -2.09
BRCA1-203ENST00000357654 KRTAP4-8Q9BYQ9 185 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms