RNA–Protein interactions for RNA: ENST00000357227.8

CDK16-202, Transcript of cyclin dependent kinase 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK16, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-202ENST00000357227 KRTAP3-2Q9BYR7 98 aa8.14□□□□□ -1.11
CDK16-202ENST00000357227 DNAH5Q8TE73 4624 aa8.13□□□□□ -1.11
CDK16-202ENST00000357227 SACSQ9NZJ4 4579 aa8.11□□□□□ -1.11
CDK16-202ENST00000357227 KRTAP3-3Q9BYR6 98 aa8.07□□□□□ -1.12
CDK16-202ENST00000357227 XP32Q5T750 250 aa8.06□□□□□ -1.12
CDK16-202ENST00000357227 VPS13BQ7Z7G8 4022 aa8.05□□□□□ -1.12
CDK16-202ENST00000357227 KRTAP12-1P59990 96 aa8.02□□□□□ -1.13
CDK16-202ENST00000357227 PLAC4Q8WY50 150 aa7.98□□□□□ -1.13
CDK16-202ENST00000357227 RYR2Q92736 4967 aa7.98□□□□□ -1.13
CDK16-202ENST00000357227 RYR3Q15413 4870 aa7.97□□□□□ -1.13
CDK16-202ENST00000357227 FAT2Q9NYQ8 4349 aa7.94□□□□□ -1.14
CDK16-202ENST00000357227 PKHD1P08F94 4074 aa7.91□□□□□ -1.14
CDK16-202ENST00000357227 PKD1P98161 4303 aa7.9□□□□□ -1.14
CDK16-202ENST00000357227 FAT1Q14517 4588 aa7.89□□□□□ -1.15
CDK16-202ENST00000357227 RPS29P62273 56 aaKnown RBP7.8□□□□□ -1.16
CDK16-202ENST00000357227 KRTAP10-8P60410 259 aa7.8□□□□□ -1.16
CDK16-202ENST00000357227 DYNC1H1Q14204 4646 aaKnown RBP7.78□□□□□ -1.16
CDK16-202ENST00000357227 SEC61BP60468 96 aaKnown RBP7.74□□□□□ -1.17
CDK16-202ENST00000357227 A0A1B0GVY2 172 aa7.73□□□□□ -1.17
CDK16-202ENST00000357227 EPPK1P58107 5090 aaKnown RBP7.72□□□□□ -1.17
CDK16-202ENST00000357227 APOBP04114 4563 aaKnown RBP7.66□□□□□ -1.18
CDK16-202ENST00000357227 KIAA1109Q2LD37 5005 aa7.64□□□□□ -1.19
CDK16-202ENST00000357227 LCE2DQ5TA82 110 aaPredicted RBP7.63□□□□□ -1.19
CDK16-202ENST00000357227 M0QZ58 72 aa7.62□□□□□ -1.19
CDK16-202ENST00000357227 KRTAP10-4P60372 401 aaPredicted RBP7.6□□□□□ -1.19
CDK16-202ENST00000357227 MYCBP2O75592 4640 aa7.59□□□□□ -1.19
CDK16-202ENST00000357227 LRP1Q07954 4544 aaKnown RBP7.59□□□□□ -1.19
CDK16-202ENST00000357227 HSPG2P98160 4391 aa7.58□□□□□ -1.2
CDK16-202ENST00000357227 PKHD1L1Q86WI1 4243 aa7.52□□□□□ -1.21
CDK16-202ENST00000357227 RYR1P21817 5038 aa7.49□□□□□ -1.21
CDK16-202ENST00000357227 Q5VSD8 79 aa7.47□□□□□ -1.21
CDK16-202ENST00000357227 KRTAP17-1Q9BYP8 105 aa7.46□□□□□ -1.21
CDK16-202ENST00000357227 R4GN34 69 aa7.45□□□□□ -1.22
CDK16-202ENST00000357227 FAT3Q8TDW7 4589 aa7.38□□□□□ -1.23
CDK16-202ENST00000357227 KRTAP4-5Q9BYR2 181 aa7.36□□□□□ -1.23
CDK16-202ENST00000357227 BIRC6Q9NR09 4857 aa7.33□□□□□ -1.24
CDK16-202ENST00000357227 LPAP08519 4548 aa7.31□□□□□ -1.24
CDK16-202ENST00000357227 PP632Q6XCG6 107 aa7.3□□□□□ -1.24
CDK16-202ENST00000357227 CAMK2N1Q7Z7J9 78 aa7.3□□□□□ -1.24
CDK16-202ENST00000357227 LORP23490 312 aaPredicted RBP7.27□□□□□ -1.25
CDK16-202ENST00000357227 ABCA13Q86UQ4 5058 aa7.27□□□□□ -1.25
CDK16-202ENST00000357227 TNXBP22105 4242 aa7.24□□□□□ -1.25
CDK16-202ENST00000357227 PRO2289Q9P1D8 64 aa7.23□□□□□ -1.25
CDK16-202ENST00000357227 HERC2O95714 4834 aa7.23□□□□□ -1.25
CDK16-202ENST00000357227 LRP2P98164 4655 aa7.2□□□□□ -1.26
CDK16-202ENST00000357227 MT1HL1P0DM35 61 aa7.14□□□□□ -1.27
CDK16-202ENST00000357227 PCLOQ9Y6V0 5065 aa7.11□□□□□ -1.27
CDK16-202ENST00000357227 J3QL48 77 aa7.11□□□□□ -1.27
CDK16-202ENST00000357227 SPRR5A0A1B0GTR4 108 aa7.11□□□□□ -1.27
CDK16-202ENST00000357227 HERC1Q15751 4861 aa7□□□□□ -1.29
CDK16-202ENST00000357227 TNP1P09430 55 aa6.93□□□□□ -1.3
CDK16-202ENST00000357227 INE1O15225 51 aa6.9□□□□□ -1.31
CDK16-202ENST00000357227 KRTAP4-1Q9BYQ7 146 aa6.78□□□□□ -1.32
CDK16-202ENST00000357227 MUC2Q02817 5179 aa6.7□□□□□ -1.34
CDK16-202ENST00000357227 KRTAP23-1A1A580 65 aa6.7□□□□□ -1.34
CDK16-202ENST00000357227 HMCN2Q8NDA2 5059 aa6.69□□□□□ -1.34
CDK16-202ENST00000357227 UBR4Q5T4S7 5183 aa6.62□□□□□ -1.35
CDK16-202ENST00000357227 RNF213Q63HN8 5207 aa6.59□□□□□ -1.35
CDK16-202ENST00000357227 MUC17Q685J3 4493 aa6.59□□□□□ -1.35
CDK16-202ENST00000357227 LCE3AQ5TA76 89 aa6.55□□□□□ -1.36
CDK16-202ENST00000357227 KRTAP19-2Q3LHN2 52 aa6.44□□□□□ -1.38
CDK16-202ENST00000357227 FAT4Q6V0I7 4981 aa6.36□□□□□ -1.39
CDK16-202ENST00000357227 M0R2T5 61 aa6.36□□□□□ -1.39
CDK16-202ENST00000357227 FLGP20930 4061 aaPredicted RBP6.35□□□□□ -1.39
CDK16-202ENST00000357227 LCE2BO14633 110 aa6.35□□□□□ -1.39
CDK16-202ENST00000357227 KRTAP8-1Q8IUC2 63 aa6.2□□□□□ -1.42
CDK16-202ENST00000357227 KRTAP10-12P60413 245 aa6.17□□□□□ -1.42
CDK16-202ENST00000357227 KRTAP10-10P60014 251 aa6.15□□□□□ -1.43
CDK16-202ENST00000357227 KRTAP12-3P60328 96 aa6.14□□□□□ -1.43
CDK16-202ENST00000357227 LCE2CQ5TA81 110 aa6.08□□□□□ -1.44
CDK16-202ENST00000357227 KRTAP19-1Q8IUB9 90 aa6.07□□□□□ -1.44
CDK16-202ENST00000357227 SPRR2GQ9BYE4 73 aa6.03□□□□□ -1.44
CDK16-202ENST00000357227 MT1HP80294 61 aa5.98□□□□□ -1.45
CDK16-202ENST00000357227 MT1FP04733 61 aa5.97□□□□□ -1.45
CDK16-202ENST00000357227 MT2AP02795 61 aa5.93□□□□□ -1.46
CDK16-202ENST00000357227 KRTAP10-5P60370 271 aa5.9□□□□□ -1.47
CDK16-202ENST00000357227 KRTAP9-8Q9BYQ0 159 aa5.82□□□□□ -1.48
CDK16-202ENST00000357227 KRTAP10-7P60409 375 aaPredicted RBP5.8□□□□□ -1.48
CDK16-202ENST00000357227 MT1XP80297 61 aa5.79□□□□□ -1.48
CDK16-202ENST00000357227 LCE3CQ5T5A8 94 aa5.79□□□□□ -1.48
CDK16-202ENST00000357227 LCE2AQ5TA79 106 aaPredicted RBP5.77□□□□□ -1.49
CDK16-202ENST00000357227 KRTAP9-6A8MVA2 160 aa5.76□□□□□ -1.49
CDK16-202ENST00000357227 MT1BP07438 61 aa5.73□□□□□ -1.49
CDK16-202ENST00000357227 FSIP2Q5CZC0 6907 aa5.72□□□□□ -1.49
CDK16-202ENST00000357227 KRTAP19-8Q3LI54 63 aa5.68□□□□□ -1.5
CDK16-202ENST00000357227 KRTAP19-5Q3LI72 72 aa5.67□□□□□ -1.5
CDK16-202ENST00000357227 KRTAP2-3P0C7H8 128 aa5.66□□□□□ -1.5
CDK16-202ENST00000357227 KRTAP2-4Q9BYR9 128 aa5.66□□□□□ -1.5
CDK16-202ENST00000357227 KRTAP2-1Q9BYU5 128 aa5.66□□□□□ -1.5
CDK16-202ENST00000357227 USH2AO75445 5202 aa5.62□□□□□ -1.51
CDK16-202ENST00000357227 KMT2DO14686 5537 aa5.58□□□□□ -1.52
CDK16-202ENST00000357227 KRTAP9-3Q9BYQ3 159 aa5.55□□□□□ -1.52
CDK16-202ENST00000357227 KRTAP4-7Q9BYR0 210 aa5.53□□□□□ -1.52
CDK16-202ENST00000357227 KRTAP4-8A0A0G2JLE6 195 aa5.41□□□□□ -1.54
CDK16-202ENST00000357227 KRTAP4-8Q9BYQ9 185 aa5.41□□□□□ -1.54
CDK16-202ENST00000357227 KRTAP12-4P60329 112 aa5.36□□□□□ -1.55
CDK16-202ENST00000357227 SSPOA2VEC9 5147 aa5.31□□□□□ -1.56
CDK16-202ENST00000357227 KRTAP9-2Q9BYQ4 174 aa5.26□□□□□ -1.57
CDK16-202ENST00000357227 LOC100996750A0A140TA64 210 aa5.24□□□□□ -1.57
CDK16-202ENST00000357227 KRTAP4-6Q9BYQ5 205 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms