RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 C10orf95Q9H7T3 257 aa6.88□□□□□ -1.31
NCDN-201ENST00000356090 KRTAP10-8P60410 259 aa6.86□□□□□ -1.31
NCDN-201ENST00000356090 KRTAP10-4P60372 401 aaPredicted RBP6.86□□□□□ -1.31
NCDN-201ENST00000356090 MYCBP2O75592 4640 aa6.84□□□□□ -1.31
NCDN-201ENST00000356090 SACSQ9NZJ4 4579 aa6.84□□□□□ -1.31
NCDN-201ENST00000356090 KRTAP10-6P60371 365 aaPredicted RBP6.83□□□□□ -1.32
NCDN-201ENST00000356090 A0A1B0GVY2 172 aa6.83□□□□□ -1.32
NCDN-201ENST00000356090 Q5VSD8 79 aa6.83□□□□□ -1.32
NCDN-201ENST00000356090 LUZP6Q538Z0 58 aa6.81□□□□□ -1.32
NCDN-201ENST00000356090 KRTAP3-3Q9BYR6 98 aa6.8□□□□□ -1.32
NCDN-201ENST00000356090 XP32Q5T750 250 aa6.8□□□□□ -1.32
NCDN-201ENST00000356090 LRP1Q07954 4544 aaKnown RBP6.79□□□□□ -1.32
NCDN-201ENST00000356090 PKHD1L1Q86WI1 4243 aa6.75□□□□□ -1.33
NCDN-201ENST00000356090 TPRXLQ17RH7 258 aa6.75□□□□□ -1.33
NCDN-201ENST00000356090 KRTAP3-2Q9BYR7 98 aa6.74□□□□□ -1.33
NCDN-201ENST00000356090 APOBP04114 4563 aaKnown RBP6.72□□□□□ -1.33
NCDN-201ENST00000356090 KRTAP12-2P59991 146 aa6.7□□□□□ -1.34
NCDN-201ENST00000356090 KRTAP21-3Q3LHN1 58 aa6.7□□□□□ -1.34
NCDN-201ENST00000356090 HSPG2P98160 4391 aa6.63□□□□□ -1.35
NCDN-201ENST00000356090 FAT3Q8TDW7 4589 aa6.59□□□□□ -1.35
NCDN-201ENST00000356090 M0QZ58 72 aa6.59□□□□□ -1.36
NCDN-201ENST00000356090 KRTAP12-1P59990 96 aa6.58□□□□□ -1.36
NCDN-201ENST00000356090 KMT2CQ8NEZ4 4911 aaKnown RBP6.58□□□□□ -1.36
NCDN-201ENST00000356090 R4GN34 69 aa6.55□□□□□ -1.36
NCDN-201ENST00000356090 RYR2Q92736 4967 aa6.52□□□□□ -1.37
NCDN-201ENST00000356090 TNXBP22105 4242 aa6.51□□□□□ -1.37
NCDN-201ENST00000356090 KRTAP15-1Q3LI76 137 aa6.5□□□□□ -1.37
NCDN-201ENST00000356090 KIAA1109Q2LD37 5005 aa6.48□□□□□ -1.37
NCDN-201ENST00000356090 LRP2P98164 4655 aa6.47□□□□□ -1.37
NCDN-201ENST00000356090 KRTAP17-1Q9BYP8 105 aa6.47□□□□□ -1.37
NCDN-201ENST00000356090 MT1HL1P0DM35 61 aa6.46□□□□□ -1.38
NCDN-201ENST00000356090 SEC61BP60468 96 aaKnown RBP6.44□□□□□ -1.38
NCDN-201ENST00000356090 LPAP08519 4548 aa6.44□□□□□ -1.38
NCDN-201ENST00000356090 RYR1P21817 5038 aa6.39□□□□□ -1.39
NCDN-201ENST00000356090 RYR3Q15413 4870 aa6.37□□□□□ -1.39
NCDN-201ENST00000356090 CAMK2N1Q7Z7J9 78 aa6.33□□□□□ -1.4
NCDN-201ENST00000356090 LORP23490 312 aaPredicted RBP6.3□□□□□ -1.4
NCDN-201ENST00000356090 J3QL48 77 aa6.29□□□□□ -1.4
NCDN-201ENST00000356090 KRTAP4-5Q9BYR2 181 aa6.25□□□□□ -1.41
NCDN-201ENST00000356090 PLAC4Q8WY50 150 aa6.23□□□□□ -1.41
NCDN-201ENST00000356090 ABCA13Q86UQ4 5058 aa6.18□□□□□ -1.42
NCDN-201ENST00000356090 KRTAP4-1Q9BYQ7 146 aa6.13□□□□□ -1.43
NCDN-201ENST00000356090 EPPK1P58107 5090 aaKnown RBP6.13□□□□□ -1.43
NCDN-201ENST00000356090 MUC2Q02817 5179 aa6□□□□□ -1.45
NCDN-201ENST00000356090 PP632Q6XCG6 107 aa5.96□□□□□ -1.46
NCDN-201ENST00000356090 TNP1P09430 55 aa5.94□□□□□ -1.46
NCDN-201ENST00000356090 MUC17Q685J3 4493 aa5.9□□□□□ -1.46
NCDN-201ENST00000356090 M0R2T5 61 aa5.89□□□□□ -1.47
NCDN-201ENST00000356090 HERC2O95714 4834 aa5.85□□□□□ -1.47
NCDN-201ENST00000356090 KRTAP19-2Q3LHN2 52 aa5.79□□□□□ -1.48
NCDN-201ENST00000356090 FAT4Q6V0I7 4981 aa5.71□□□□□ -1.5
NCDN-201ENST00000356090 PRO2289Q9P1D8 64 aa5.65□□□□□ -1.51
NCDN-201ENST00000356090 KRTAP10-10P60014 251 aa5.63□□□□□ -1.51
NCDN-201ENST00000356090 FLGP20930 4061 aaPredicted RBP5.63□□□□□ -1.51
NCDN-201ENST00000356090 HERC1Q15751 4861 aa5.62□□□□□ -1.51
NCDN-201ENST00000356090 PCLOQ9Y6V0 5065 aa5.62□□□□□ -1.51
NCDN-201ENST00000356090 BIRC6Q9NR09 4857 aa5.57□□□□□ -1.52
NCDN-201ENST00000356090 LCE3AQ5TA76 89 aa5.57□□□□□ -1.52
NCDN-201ENST00000356090 RNF213Q63HN8 5207 aa5.55□□□□□ -1.52
NCDN-201ENST00000356090 KRTAP19-1Q8IUB9 90 aa5.52□□□□□ -1.53
NCDN-201ENST00000356090 KRTAP23-1A1A580 65 aa5.49□□□□□ -1.53
NCDN-201ENST00000356090 SPRR2GQ9BYE4 73 aa5.48□□□□□ -1.53
NCDN-201ENST00000356090 LCE2CQ5TA81 110 aa5.47□□□□□ -1.53
NCDN-201ENST00000356090 SPRR5A0A1B0GTR4 108 aa5.42□□□□□ -1.54
NCDN-201ENST00000356090 MT1FP04733 61 aa5.42□□□□□ -1.54
NCDN-201ENST00000356090 MT1HP80294 61 aa5.42□□□□□ -1.54
NCDN-201ENST00000356090 UBR4Q5T4S7 5183 aa5.4□□□□□ -1.55
NCDN-201ENST00000356090 MT2AP02795 61 aa5.39□□□□□ -1.55
NCDN-201ENST00000356090 HMCN2Q8NDA2 5059 aa5.39□□□□□ -1.55
NCDN-201ENST00000356090 INE1O15225 51 aa5.32□□□□□ -1.56
NCDN-201ENST00000356090 KRTAP10-12P60413 245 aa5.3□□□□□ -1.56
NCDN-201ENST00000356090 KRTAP12-3P60328 96 aa5.29□□□□□ -1.56
NCDN-201ENST00000356090 KRTAP9-8Q9BYQ0 159 aa5.25□□□□□ -1.57
NCDN-201ENST00000356090 KRTAP8-1Q8IUC2 63 aa5.24□□□□□ -1.57
NCDN-201ENST00000356090 KRTAP10-5P60370 271 aa5.22□□□□□ -1.57
NCDN-201ENST00000356090 MT1XP80297 61 aa5.21□□□□□ -1.58
NCDN-201ENST00000356090 MT1BP07438 61 aa5.2□□□□□ -1.58
NCDN-201ENST00000356090 KRTAP10-7P60409 375 aaPredicted RBP5.19□□□□□ -1.58
NCDN-201ENST00000356090 KRTAP19-8Q3LI54 63 aa5.16□□□□□ -1.58
NCDN-201ENST00000356090 FSIP2Q5CZC0 6907 aa5.04□□□□□ -1.6
NCDN-201ENST00000356090 USH2AO75445 5202 aa5.04□□□□□ -1.6
NCDN-201ENST00000356090 KMT2DO14686 5537 aa5.02□□□□□ -1.61
NCDN-201ENST00000356090 KRTAP19-5Q3LI72 72 aa5.02□□□□□ -1.61
NCDN-201ENST00000356090 KRTAP9-3Q9BYQ3 159 aa5.01□□□□□ -1.61
NCDN-201ENST00000356090 KRTAP4-8A0A0G2JLE6 195 aa4.93□□□□□ -1.62
NCDN-201ENST00000356090 KRTAP4-8Q9BYQ9 185 aa4.93□□□□□ -1.62
NCDN-201ENST00000356090 LCE3CQ5T5A8 94 aa4.91□□□□□ -1.62
NCDN-201ENST00000356090 LCE2DQ5TA82 110 aaPredicted RBP4.88□□□□□ -1.63
NCDN-201ENST00000356090 LCE2BO14633 110 aa4.87□□□□□ -1.63
NCDN-201ENST00000356090 KRTAP4-7Q9BYR0 210 aa4.82□□□□□ -1.64
NCDN-201ENST00000356090 KRTAP9-6A8MVA2 160 aa4.74□□□□□ -1.65
NCDN-201ENST00000356090 CRCT1Q9UGL9 99 aa4.63□□□□□ -1.67
NCDN-201ENST00000356090 KRTAP19-7Q3SYF9 63 aa4.62□□□□□ -1.67
NCDN-201ENST00000356090 LCE2AQ5TA79 106 aaPredicted RBP4.57□□□□□ -1.68
NCDN-201ENST00000356090 MT1LQ93083 61 aa4.53□□□□□ -1.68
NCDN-201ENST00000356090 DSTQ03001 7570 aaKnown RBP4.49□□□□□ -1.69
NCDN-201ENST00000356090 MT1EP04732 61 aa4.49□□□□□ -1.69
NCDN-201ENST00000356090 KRTAP2-3P0C7H8 128 aa4.48□□□□□ -1.69
NCDN-201ENST00000356090 KRTAP2-4Q9BYR9 128 aa4.48□□□□□ -1.69
NCDN-201ENST00000356090 KRTAP2-1Q9BYU5 128 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms