RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 KRTAP10-8P60410 259 aa7.86□□□□□ -1.15
STRN3-201ENST00000355683 DNAH2Q9P225 4427 aa7.86□□□□□ -1.15
STRN3-201ENST00000355683 RPS29P62273 56 aaKnown RBP7.82□□□□□ -1.16
STRN3-201ENST00000355683 ALMS1Q8TCU4 4167 aa7.81□□□□□ -1.16
STRN3-201ENST00000355683 HYDINQ4G0P3 5121 aa7.77□□□□□ -1.17
STRN3-201ENST00000355683 KRTAP4-5Q9BYR2 181 aa7.76□□□□□ -1.17
STRN3-201ENST00000355683 VPS13BQ7Z7G8 4022 aa7.76□□□□□ -1.17
STRN3-201ENST00000355683 SEC61BP60468 96 aaKnown RBP7.75□□□□□ -1.17
STRN3-201ENST00000355683 LRP1Q07954 4544 aaKnown RBP7.74□□□□□ -1.17
STRN3-201ENST00000355683 A0A0A0MQY5 61 aa7.72□□□□□ -1.17
STRN3-201ENST00000355683 PKHD1P08F94 4074 aa7.72□□□□□ -1.17
STRN3-201ENST00000355683 KIAA1109Q2LD37 5005 aa7.7□□□□□ -1.18
STRN3-201ENST00000355683 DYNC1H1Q14204 4646 aaKnown RBP7.69□□□□□ -1.18
STRN3-201ENST00000355683 KRTAP13-4Q3LI77 160 aa7.68□□□□□ -1.18
STRN3-201ENST00000355683 SACSQ9NZJ4 4579 aa7.67□□□□□ -1.18
STRN3-201ENST00000355683 KMT2CQ8NEZ4 4911 aaKnown RBP7.66□□□□□ -1.18
STRN3-201ENST00000355683 DYNC2H1Q8NCM8 4307 aaKnown RBP7.65□□□□□ -1.18
STRN3-201ENST00000355683 KRTAP10-4P60372 401 aaPredicted RBP7.64□□□□□ -1.19
STRN3-201ENST00000355683 HECTD4Q9Y4D8 3996 aa7.64□□□□□ -1.19
STRN3-201ENST00000355683 RYR1P21817 5038 aa7.64□□□□□ -1.19
STRN3-201ENST00000355683 TPRXLQ17RH7 258 aa7.59□□□□□ -1.19
STRN3-201ENST00000355683 KRTAP12-2P59991 146 aa7.58□□□□□ -1.2
STRN3-201ENST00000355683 RYR3Q15413 4870 aa7.58□□□□□ -1.2
STRN3-201ENST00000355683 RYR2Q92736 4967 aa7.56□□□□□ -1.2
STRN3-201ENST00000355683 PLAC4Q8WY50 150 aa7.55□□□□□ -1.2
STRN3-201ENST00000355683 MT1HL1P0DM35 61 aa7.54□□□□□ -1.2
STRN3-201ENST00000355683 KRTAP10-6P60371 365 aaPredicted RBP7.51□□□□□ -1.21
STRN3-201ENST00000355683 APOBP04114 4563 aaKnown RBP7.5□□□□□ -1.21
STRN3-201ENST00000355683 FAT2Q9NYQ8 4349 aa7.44□□□□□ -1.22
STRN3-201ENST00000355683 KRTAP3-3Q9BYR6 98 aa7.43□□□□□ -1.22
STRN3-201ENST00000355683 KRTAP17-1Q9BYP8 105 aa7.38□□□□□ -1.23
STRN3-201ENST00000355683 LRP2P98164 4655 aa7.38□□□□□ -1.23
STRN3-201ENST00000355683 KRTAP12-1P59990 96 aa7.37□□□□□ -1.23
STRN3-201ENST00000355683 TNP1P09430 55 aa7.36□□□□□ -1.23
STRN3-201ENST00000355683 KRTAP3-2Q9BYR7 98 aa7.34□□□□□ -1.23
STRN3-201ENST00000355683 EPPK1P58107 5090 aaKnown RBP7.26□□□□□ -1.25
STRN3-201ENST00000355683 KRTAP15-1Q3LI76 137 aa7.26□□□□□ -1.25
STRN3-201ENST00000355683 LORP23490 312 aaPredicted RBP7.22□□□□□ -1.25
STRN3-201ENST00000355683 HERC2O95714 4834 aa7.2□□□□□ -1.26
STRN3-201ENST00000355683 PKD1P98161 4303 aa7.2□□□□□ -1.26
STRN3-201ENST00000355683 BIRC6Q9NR09 4857 aa7.18□□□□□ -1.26
STRN3-201ENST00000355683 LPAP08519 4548 aa7.17□□□□□ -1.26
STRN3-201ENST00000355683 HSPG2P98160 4391 aa7.15□□□□□ -1.27
STRN3-201ENST00000355683 PP632Q6XCG6 107 aa7.1□□□□□ -1.27
STRN3-201ENST00000355683 MUC2Q02817 5179 aa7.09□□□□□ -1.27
STRN3-201ENST00000355683 KRTAP10-10P60014 251 aa7.09□□□□□ -1.28
STRN3-201ENST00000355683 KRTAP4-1Q9BYQ7 146 aa7.01□□□□□ -1.29
STRN3-201ENST00000355683 ABCA13Q86UQ4 5058 aa6.94□□□□□ -1.3
STRN3-201ENST00000355683 RNF213Q63HN8 5207 aa6.85□□□□□ -1.31
STRN3-201ENST00000355683 PCLOQ9Y6V0 5065 aa6.85□□□□□ -1.31
STRN3-201ENST00000355683 PKHD1L1Q86WI1 4243 aa6.79□□□□□ -1.32
STRN3-201ENST00000355683 FAT4Q6V0I7 4981 aa6.77□□□□□ -1.33
STRN3-201ENST00000355683 HERC1Q15751 4861 aa6.69□□□□□ -1.34
STRN3-201ENST00000355683 FSIP2Q5CZC0 6907 aa6.68□□□□□ -1.34
STRN3-201ENST00000355683 TNXBP22105 4242 aa6.59□□□□□ -1.35
STRN3-201ENST00000355683 UBR4Q5T4S7 5183 aa6.52□□□□□ -1.36
STRN3-201ENST00000355683 PRO2289Q9P1D8 64 aa6.45□□□□□ -1.38
STRN3-201ENST00000355683 LCE3AQ5TA76 89 aa6.44□□□□□ -1.38
STRN3-201ENST00000355683 MT1HP80294 61 aa6.42□□□□□ -1.38
STRN3-201ENST00000355683 OBSCNQ5VST9 7968 aa6.41□□□□□ -1.38
STRN3-201ENST00000355683 HMCN2Q8NDA2 5059 aa6.37□□□□□ -1.39
STRN3-201ENST00000355683 MT1FP04733 61 aa6.27□□□□□ -1.41
STRN3-201ENST00000355683 KRTAP10-12P60413 245 aa6.26□□□□□ -1.41
STRN3-201ENST00000355683 KRTAP12-3P60328 96 aa6.23□□□□□ -1.41
STRN3-201ENST00000355683 MT2AP02795 61 aa6.22□□□□□ -1.41
STRN3-201ENST00000355683 CRCT1Q9UGL9 99 aa6.19□□□□□ -1.42
STRN3-201ENST00000355683 LCE2CQ5TA81 110 aa6.19□□□□□ -1.42
STRN3-201ENST00000355683 USH2AO75445 5202 aa6.19□□□□□ -1.42
STRN3-201ENST00000355683 KRTAP19-1Q8IUB9 90 aa6.14□□□□□ -1.43
STRN3-201ENST00000355683 MUC17Q685J3 4493 aa6.14□□□□□ -1.43
STRN3-201ENST00000355683 KRTAP19-2Q3LHN2 52 aa6.11□□□□□ -1.43
STRN3-201ENST00000355683 SPRR2GQ9BYE4 73 aa6.03□□□□□ -1.44
STRN3-201ENST00000355683 SYNE1Q8NF91 8797 aaKnown RBP6.02□□□□□ -1.45
STRN3-201ENST00000355683 KMT2DO14686 5537 aa6.01□□□□□ -1.45
STRN3-201ENST00000355683 INE1O15225 51 aa5.99□□□□□ -1.45
STRN3-201ENST00000355683 FLGP20930 4061 aaPredicted RBP5.99□□□□□ -1.45
STRN3-201ENST00000355683 DSTQ03001 7570 aaKnown RBP5.98□□□□□ -1.45
STRN3-201ENST00000355683 KRTAP10-7P60409 375 aaPredicted RBP5.97□□□□□ -1.45
STRN3-201ENST00000355683 KRTAP9-8Q9BYQ0 159 aa5.97□□□□□ -1.45
STRN3-201ENST00000355683 KRTAP23-1A1A580 65 aa5.92□□□□□ -1.46
STRN3-201ENST00000355683 KRTAP4-8A0A0G2JLE6 195 aa5.88□□□□□ -1.47
STRN3-201ENST00000355683 SPRR5A0A1B0GTR4 108 aa5.88□□□□□ -1.47
STRN3-201ENST00000355683 KRTAP4-8Q9BYQ9 185 aa5.88□□□□□ -1.47
STRN3-201ENST00000355683 KRTAP19-5Q3LI72 72 aa5.83□□□□□ -1.48
STRN3-201ENST00000355683 LCE2AQ5TA79 106 aaPredicted RBP5.82□□□□□ -1.48
STRN3-201ENST00000355683 MT1BP07438 61 aa5.81□□□□□ -1.48
STRN3-201ENST00000355683 MT1XP80297 61 aa5.81□□□□□ -1.48
STRN3-201ENST00000355683 FCGBPQ9Y6R7 5405 aaPredicted RBP5.8□□□□□ -1.48
STRN3-201ENST00000355683 KRTAP10-5P60370 271 aa5.79□□□□□ -1.48
STRN3-201ENST00000355683 KRTAP9-3Q9BYQ3 159 aa5.77□□□□□ -1.49
STRN3-201ENST00000355683 KRTAP8-1Q8IUC2 63 aa5.7□□□□□ -1.5
STRN3-201ENST00000355683 KRTAP4-7Q9BYR0 210 aa5.7□□□□□ -1.5
STRN3-201ENST00000355683 LCE2BO14633 110 aa5.68□□□□□ -1.5
STRN3-201ENST00000355683 KRTAP19-8Q3LI54 63 aa5.67□□□□□ -1.5
STRN3-201ENST00000355683 KRTAP9-2Q9BYQ4 174 aa5.57□□□□□ -1.52
STRN3-201ENST00000355683 LCE3CQ5T5A8 94 aa5.52□□□□□ -1.53
STRN3-201ENST00000355683 SYNE2Q8WXH0 6885 aaKnown RBP5.45□□□□□ -1.54
STRN3-201ENST00000355683 MUC12Q9UKN1 5478 aa5.41□□□□□ -1.54
STRN3-201ENST00000355683 SPRR2FQ96RM1 72 aa5.38□□□□□ -1.55
STRN3-201ENST00000355683 LCE2DQ5TA82 110 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms