RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 SPAG11AQ6PDA7 123 aa6.31□□□□□ -1.4
RTN3-204ENST00000354497 IGHV6-1A0A0B4J1U7 121 aa6.3□□□□□ -1.4
RTN3-204ENST00000354497 Q8NDZ9 215 aa6.28□□□□□ -1.4
RTN3-204ENST00000354497 H0Y9P7 68 aa6.27□□□□□ -1.41
RTN3-204ENST00000354497 SPINK7P58062 85 aa6.27□□□□□ -1.41
RTN3-204ENST00000354497 KRTAP4-11Q9BYQ6 195 aa6.27□□□□□ -1.41
RTN3-204ENST00000354497 A0A1W2PNM2 257 aa6.26□□□□□ -1.41
RTN3-204ENST00000354497 MT1HP80294 61 aa6.26□□□□□ -1.41
RTN3-204ENST00000354497 SPATA8Q6RVD6 105 aa6.25□□□□□ -1.41
RTN3-204ENST00000354497 PRAC1Q96KF2 57 aa6.25□□□□□ -1.41
RTN3-204ENST00000354497 KRTAP4-2Q9BYR5 136 aa6.25□□□□□ -1.41
RTN3-204ENST00000354497 IGLV5-37A0A075B6J1 123 aa6.25□□□□□ -1.41
RTN3-204ENST00000354497 K7EQZ3 153 aa6.24□□□□□ -1.41
RTN3-204ENST00000354497 DHRS4-AS1Q9P1J3 65 aa6.22□□□□□ -1.41
RTN3-204ENST00000354497 M0R2T5 61 aa6.21□□□□□ -1.42
RTN3-204ENST00000354497 KRTAP10-6P60371 365 aaPredicted RBP6.21□□□□□ -1.42
RTN3-204ENST00000354497 KRTAP19-2Q3LHN2 52 aa6.2□□□□□ -1.42
RTN3-204ENST00000354497 Q8N377 158 aa6.2□□□□□ -1.42
RTN3-204ENST00000354497 SPINK1P00995 79 aa6.19□□□□□ -1.42
RTN3-204ENST00000354497 ZNF706Q9Y5V0 76 aaPredicted RBP6.19□□□□□ -1.42
RTN3-204ENST00000354497 TP53AIP1Q9HCN2 124 aa6.18□□□□□ -1.42
RTN3-204ENST00000354497 IGLV8-61A0A075B6I0 122 aa6.17□□□□□ -1.42
RTN3-204ENST00000354497 PCOTHQ58A44 107 aa6.16□□□□□ -1.42
RTN3-204ENST00000354497 ROMO1P60602 79 aa6.15□□□□□ -1.43
RTN3-204ENST00000354497 IGLV9-49A0A0B4J1Y8 123 aa6.14□□□□□ -1.43
RTN3-204ENST00000354497 ADM2Q7Z4H4 148 aa6.14□□□□□ -1.43
RTN3-204ENST00000354497 HRES1P13985 223 aa6.12□□□□□ -1.43
RTN3-204ENST00000354497 KRTAP23-1A1A580 65 aa6.11□□□□□ -1.43
RTN3-204ENST00000354497 A8MWP4 228 aa6.11□□□□□ -1.43
RTN3-204ENST00000354497 COX6B2Q6YFQ2 88 aa6.11□□□□□ -1.43
RTN3-204ENST00000354497 CSAG1Q6PB30 78 aa6.1□□□□□ -1.43
RTN3-204ENST00000354497 RPS29P62273 56 aaKnown RBP6.09□□□□□ -1.43
RTN3-204ENST00000354497 C9orf92A6NGG3 77 aa6.08□□□□□ -1.44
RTN3-204ENST00000354497 SPRR1AP35321 89 aa6.08□□□□□ -1.44
RTN3-204ENST00000354497 SSPOA2VEC9 5147 aa6.08□□□□□ -1.44
RTN3-204ENST00000354497 A0A0A0MQY5 61 aa6.08□□□□□ -1.44
RTN3-204ENST00000354497 WFDC13Q8IUB5 93 aa6.08□□□□□ -1.44
RTN3-204ENST00000354497 USH2AO75445 5202 aa6.07□□□□□ -1.44
RTN3-204ENST00000354497 KRTAP4-16G5E9R7 235 aaPredicted RBP6.07□□□□□ -1.44
RTN3-204ENST00000354497 UQCR11O14957 56 aa6.07□□□□□ -1.44
RTN3-204ENST00000354497 Q6ZRX8 168 aa6.07□□□□□ -1.44
RTN3-204ENST00000354497 LINC00483Q53H64 154 aa6.06□□□□□ -1.44
RTN3-204ENST00000354497 SSBP3-AS1Q7Z2R9 100 aa6.06□□□□□ -1.44
RTN3-204ENST00000354497 A0A087WSZ3 146 aa6.05□□□□□ -1.44
RTN3-204ENST00000354497 FLGP20930 4061 aaPredicted RBP6.04□□□□□ -1.44
RTN3-204ENST00000354497 MIR22HGQ0VDD5 57 aa6.03□□□□□ -1.44
RTN3-204ENST00000354497 KRTAP25-1Q3LHN0 102 aa6.02□□□□□ -1.45
RTN3-204ENST00000354497 ACYP2P14621 99 aa6.01□□□□□ -1.45
RTN3-204ENST00000354497 LINC00472Q9H8W2 130 aa6□□□□□ -1.45
RTN3-204ENST00000354497 MMP24-AS1A0A0U1RRL7 71 aa5.99□□□□□ -1.45
RTN3-204ENST00000354497 A0A1B0GU69 56 aa5.98□□□□□ -1.45
RTN3-204ENST00000354497 IGFL1Q6UW32 110 aa5.97□□□□□ -1.45
RTN3-204ENST00000354497 DEFB105AQ8NG35 78 aa5.97□□□□□ -1.45
RTN3-204ENST00000354497 FCGBPQ9Y6R7 5405 aaPredicted RBP5.96□□□□□ -1.46
RTN3-204ENST00000354497 DEFB116Q30KQ4 102 aa5.94□□□□□ -1.46
RTN3-204ENST00000354497 DMAC1Q96GE9 116 aa5.93□□□□□ -1.46
RTN3-204ENST00000354497 SPRR1BP22528 89 aa5.92□□□□□ -1.46
RTN3-204ENST00000354497 RPL37P61927 97 aaKnown RBP5.91□□□□□ -1.46
RTN3-204ENST00000354497 P0C880 135 aa5.87□□□□□ -1.47
RTN3-204ENST00000354497 KRTAP16-1A8MUX0 517 aa5.86□□□□□ -1.47
RTN3-204ENST00000354497 SYNE2Q8WXH0 6885 aaKnown RBP5.85□□□□□ -1.47
RTN3-204ENST00000354497 MACF1Q9UPN3 7388 aaKnown RBP5.85□□□□□ -1.47
RTN3-204ENST00000354497 A8MUU9 505 aa5.84□□□□□ -1.47
RTN3-204ENST00000354497 C8orf17Q9NRJ1 99 aa5.84□□□□□ -1.47
RTN3-204ENST00000354497 KRTAP9-8Q9BYQ0 159 aa5.83□□□□□ -1.48
RTN3-204ENST00000354497 MRPL34Q9BQ48 92 aaKnown RBP5.82□□□□□ -1.48
RTN3-204ENST00000354497 KRTAP15-1Q3LI76 137 aa5.78□□□□□ -1.48
RTN3-204ENST00000354497 C20orf166-AS1Q96NR2 134 aa5.77□□□□□ -1.49
RTN3-204ENST00000354497 A0A1B0GVX0 72 aa5.76□□□□□ -1.49
RTN3-204ENST00000354497 Q5W150 140 aa5.75□□□□□ -1.49
RTN3-204ENST00000354497 Q96NJ1 140 aa5.75□□□□□ -1.49
RTN3-204ENST00000354497 A0A0G2JQZ4 141 aa5.74□□□□□ -1.49
RTN3-204ENST00000354497 MT2AP02795 61 aa5.74□□□□□ -1.49
RTN3-204ENST00000354497 MT1FP04733 61 aa5.69□□□□□ -1.5
RTN3-204ENST00000354497 KRTAP10-10P60014 251 aa5.69□□□□□ -1.5
RTN3-204ENST00000354497 K7ERS5 55 aa5.67□□□□□ -1.5
RTN3-204ENST00000354497 IGKV2-30P06310 120 aa5.63□□□□□ -1.51
RTN3-204ENST00000354497 KRTAP6-3Q3LI67 103 aa5.63□□□□□ -1.51
RTN3-204ENST00000354497 KRTAP19-6Q3LI70 58 aa5.6□□□□□ -1.51
RTN3-204ENST00000354497 NDUFAF8A1L188 74 aa5.59□□□□□ -1.51
RTN3-204ENST00000354497 H0YAA0 97 aa5.57□□□□□ -1.52
RTN3-204ENST00000354497 IGKV2D-30A0A075B6S6 120 aa5.57□□□□□ -1.52
RTN3-204ENST00000354497 LUZP6Q538Z0 58 aa5.56□□□□□ -1.52
RTN3-204ENST00000354497 NEBP20929 6669 aa5.55□□□□□ -1.52
RTN3-204ENST00000354497 SPINT4Q6UDR6 99 aa5.54□□□□□ -1.52
RTN3-204ENST00000354497 A0A1B0GU33 70 aa5.49□□□□□ -1.53
RTN3-204ENST00000354497 MUC12Q9UKN1 5478 aa5.48□□□□□ -1.53
RTN3-204ENST00000354497 KRTAP20-1Q3LI63 56 aa5.47□□□□□ -1.53
RTN3-204ENST00000354497 H1FX-AS1Q4G0G2 97 aa5.47□□□□□ -1.53
RTN3-204ENST00000354497 KRTAP5-3Q6L8H2 238 aa5.39□□□□□ -1.55
RTN3-204ENST00000354497 CAMK2N1Q7Z7J9 78 aa5.32□□□□□ -1.56
RTN3-204ENST00000354497 CRIPTQ9P021 101 aa5.3□□□□□ -1.56
RTN3-204ENST00000354497 MDN1Q9NU22 5596 aa5.27□□□□□ -1.57
RTN3-204ENST00000354497 KMT2DO14686 5537 aa5.19□□□□□ -1.58
RTN3-204ENST00000354497 KRTAP2-3P0C7H8 128 aa5.18□□□□□ -1.58
RTN3-204ENST00000354497 KRTAP2-4Q9BYR9 128 aa5.18□□□□□ -1.58
RTN3-204ENST00000354497 KRTAP5-9P26371 169 aa5.15□□□□□ -1.58
RTN3-204ENST00000354497 MT1BP07438 61 aa5.09□□□□□ -1.59
RTN3-204ENST00000354497 PLAC4Q8WY50 150 aa5.09□□□□□ -1.59
RTN3-204ENST00000354497 C10orf95Q9H7T3 257 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms