RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 NDUFC1O43677 76 aa2.89□□□□□ -1.95
VCAM1-202ENST00000347652 SPAG11AQ6PDA7 123 aa2.89□□□□□ -1.95
VCAM1-202ENST00000347652 CYP4F30PQ9H0H9 118 aa2.89□□□□□ -1.95
VCAM1-202ENST00000347652 IGKV2D-30A0A075B6S6 120 aa2.89□□□□□ -1.95
VCAM1-202ENST00000347652 A0A1W2PNM2 257 aa2.89□□□□□ -1.95
VCAM1-202ENST00000347652 PDE6GP18545 87 aa2.88□□□□□ -1.95
VCAM1-202ENST00000347652 A0A087WSZ3 146 aa2.88□□□□□ -1.95
VCAM1-202ENST00000347652 SPINK1P00995 79 aa2.88□□□□□ -1.95
VCAM1-202ENST00000347652 RPS29P62273 56 aaKnown RBP2.87□□□□□ -1.95
VCAM1-202ENST00000347652 LCE3BQ5TA77 95 aa2.87□□□□□ -1.95
VCAM1-202ENST00000347652 RNF213Q63HN8 5207 aa2.85□□□□□ -1.95
VCAM1-202ENST00000347652 KRTAP4-12Q9BQ66 201 aa2.84□□□□□ -1.95
VCAM1-202ENST00000347652 KRTAP9-9Q9BYP9 154 aa2.84□□□□□ -1.95
VCAM1-202ENST00000347652 KRTAP9-4Q9BYQ2 154 aa2.84□□□□□ -1.95
VCAM1-202ENST00000347652 ACYP1P07311 99 aa2.84□□□□□ -1.95
VCAM1-202ENST00000347652 SNURFQ9Y675 71 aa2.83□□□□□ -1.96
VCAM1-202ENST00000347652 Q96NJ1 140 aa2.83□□□□□ -1.96
VCAM1-202ENST00000347652 LINC00472Q9H8W2 130 aa2.82□□□□□ -1.96
VCAM1-202ENST00000347652 LINC00846Q9NV44 126 aa2.81□□□□□ -1.96
VCAM1-202ENST00000347652 NREPQ16612 68 aa2.81□□□□□ -1.96
VCAM1-202ENST00000347652 KRTAP4-9Q9BYQ8 210 aa2.81□□□□□ -1.96
VCAM1-202ENST00000347652 LOC101927531A0A1B0GV80 90 aa2.8□□□□□ -1.96
VCAM1-202ENST00000347652 HRES1P13985 223 aa2.8□□□□□ -1.96
VCAM1-202ENST00000347652 PRR15LQ9BU68 103 aa2.8□□□□□ -1.96
VCAM1-202ENST00000347652 MUC2Q02817 5179 aa2.8□□□□□ -1.96
VCAM1-202ENST00000347652 KRTAP5-3Q6L8H2 238 aa2.8□□□□□ -1.96
VCAM1-202ENST00000347652 HMCN1Q96RW7 5635 aa2.8□□□□□ -1.96
VCAM1-202ENST00000347652 UBL5Q9BZL1 73 aa2.79□□□□□ -1.96
VCAM1-202ENST00000347652 LCE1DQ5T752 114 aa2.79□□□□□ -1.96
VCAM1-202ENST00000347652 A0A087WVE0 104 aa2.78□□□□□ -1.96
VCAM1-202ENST00000347652 IGKV4-1P06312 121 aa2.78□□□□□ -1.96
VCAM1-202ENST00000347652 TPRXLQ17RH7 258 aa2.78□□□□□ -1.96
VCAM1-202ENST00000347652 LCE5AQ5TCM9 118 aa2.78□□□□□ -1.96
VCAM1-202ENST00000347652 IGKV3D-7A0A0C4DH55 119 aa2.78□□□□□ -1.97
VCAM1-202ENST00000347652 PRO2289Q9P1D8 64 aa2.78□□□□□ -1.97
VCAM1-202ENST00000347652 KRTAP9-8Q9BYQ0 159 aa2.77□□□□□ -1.97
VCAM1-202ENST00000347652 DSCR10P59022 87 aa2.77□□□□□ -1.97
VCAM1-202ENST00000347652 KRTAP4-2Q9BYR5 136 aa2.76□□□□□ -1.97
VCAM1-202ENST00000347652 KRTAP13-3Q3SY46 172 aa2.76□□□□□ -1.97
VCAM1-202ENST00000347652 NDUFB1O75438 58 aa2.75□□□□□ -1.97
VCAM1-202ENST00000347652 MUC17Q685J3 4493 aa2.74□□□□□ -1.97
VCAM1-202ENST00000347652 C9orf92A6NGG3 77 aa2.74□□□□□ -1.97
VCAM1-202ENST00000347652 K7EQZ3 153 aa2.74□□□□□ -1.97
VCAM1-202ENST00000347652 ATP5EP2Q5VTU8 51 aa2.74□□□□□ -1.97
VCAM1-202ENST00000347652 SPINT4Q6UDR6 99 aa2.74□□□□□ -1.97
VCAM1-202ENST00000347652 Q8N9L7 120 aa2.74□□□□□ -1.97
VCAM1-202ENST00000347652 DMAC1Q96GE9 116 aa2.74□□□□□ -1.97
VCAM1-202ENST00000347652 MMP24-AS1A0A0U1RRL7 71 aa2.72□□□□□ -1.97
VCAM1-202ENST00000347652 RPL37P61927 97 aaKnown RBP2.69□□□□□ -1.98
VCAM1-202ENST00000347652 MRPL34Q9BQ48 92 aaKnown RBP2.69□□□□□ -1.98
VCAM1-202ENST00000347652 SPINK7P58062 85 aa2.69□□□□□ -1.98
VCAM1-202ENST00000347652 WFDC13Q8IUB5 93 aa2.69□□□□□ -1.98
VCAM1-202ENST00000347652 KRTAP4-1Q9BYQ7 146 aa2.68□□□□□ -1.98
VCAM1-202ENST00000347652 FAT4Q6V0I7 4981 aa2.67□□□□□ -1.98
VCAM1-202ENST00000347652 LINC01558Q9Y6Z2 57 aa2.67□□□□□ -1.98
VCAM1-202ENST00000347652 LINC00208Q96KT6 92 aa2.67□□□□□ -1.98
VCAM1-202ENST00000347652 KRTAP19-4Q3LI73 84 aa2.66□□□□□ -1.98
VCAM1-202ENST00000347652 PCOTHQ58A44 107 aa2.65□□□□□ -1.99
VCAM1-202ENST00000347652 ZCCHC13Q8WW36 166 aaKnown RBP2.64□□□□□ -1.99
VCAM1-202ENST00000347652 LCE4AQ5TA78 99 aa2.64□□□□□ -1.99
VCAM1-202ENST00000347652 TP53AIP1Q9HCN2 124 aa2.64□□□□□ -1.99
VCAM1-202ENST00000347652 KRTAP9-7A8MTY7 169 aa2.63□□□□□ -1.99
VCAM1-202ENST00000347652 KRTAP19-2Q3LHN2 52 aa2.59□□□□□ -2
VCAM1-202ENST00000347652 H0Y9P7 68 aa2.58□□□□□ -2
VCAM1-202ENST00000347652 KRTAP4-11Q9BYQ6 195 aa2.58□□□□□ -2
VCAM1-202ENST00000347652 UQCR11O14957 56 aa2.55□□□□□ -2
VCAM1-202ENST00000347652 FLGP20930 4061 aaPredicted RBP2.55□□□□□ -2
VCAM1-202ENST00000347652 KRTAP19-1Q8IUB9 90 aa2.54□□□□□ -2
VCAM1-202ENST00000347652 LCE1FQ5T754 118 aa2.54□□□□□ -2
VCAM1-202ENST00000347652 MT1HP80294 61 aa2.53□□□□□ -2
VCAM1-202ENST00000347652 SPATA8Q6RVD6 105 aa2.51□□□□□ -2.01
VCAM1-202ENST00000347652 COX6B2Q6YFQ2 88 aa2.51□□□□□ -2.01
VCAM1-202ENST00000347652 COA5Q86WW8 74 aa2.51□□□□□ -2.01
VCAM1-202ENST00000347652 ACYP2P14621 99 aa2.49□□□□□ -2.01
VCAM1-202ENST00000347652 H1FX-AS1Q4G0G2 97 aa2.48□□□□□ -2.01
VCAM1-202ENST00000347652 KRTAP2-2Q9BYT5 123 aa2.47□□□□□ -2.01
VCAM1-202ENST00000347652 KRTAP10-6P60371 365 aaPredicted RBP2.46□□□□□ -2.02
VCAM1-202ENST00000347652 M0R2T5 61 aa2.46□□□□□ -2.02
VCAM1-202ENST00000347652 FSIP2Q5CZC0 6907 aa2.45□□□□□ -2.02
VCAM1-202ENST00000347652 CRIPTQ9P021 101 aa2.44□□□□□ -2.02
VCAM1-202ENST00000347652 A0A1B0GU69 56 aa2.43□□□□□ -2.02
VCAM1-202ENST00000347652 S4R3F8 94 aa2.43□□□□□ -2.02
VCAM1-202ENST00000347652 MUC5BQ9HC84 5762 aaPredicted RBP2.43□□□□□ -2.02
VCAM1-202ENST00000347652 INE1O15225 51 aa2.42□□□□□ -2.02
VCAM1-202ENST00000347652 LCE1AQ5T7P2 110 aa2.39□□□□□ -2.03
VCAM1-202ENST00000347652 KRTAP9-3Q9BYQ3 159 aa2.39□□□□□ -2.03
VCAM1-202ENST00000347652 MT2AP02795 61 aa2.37□□□□□ -2.03
VCAM1-202ENST00000347652 MT1FP04733 61 aa2.37□□□□□ -2.03
VCAM1-202ENST00000347652 LCE3CQ5T5A8 94 aa2.37□□□□□ -2.03
VCAM1-202ENST00000347652 USH2AO75445 5202 aa2.35□□□□□ -2.03
VCAM1-202ENST00000347652 GPR98Q8WXG9 6306 aa2.35□□□□□ -2.03
VCAM1-202ENST00000347652 H0YAA0 97 aa2.34□□□□□ -2.04
VCAM1-202ENST00000347652 KRTAP10-10P60014 251 aa2.33□□□□□ -2.04
VCAM1-202ENST00000347652 SSPOA2VEC9 5147 aa2.32□□□□□ -2.04
VCAM1-202ENST00000347652 PLAC4Q8WY50 150 aa2.32□□□□□ -2.04
VCAM1-202ENST00000347652 CRCT1Q9UGL9 99 aa2.32□□□□□ -2.04
VCAM1-202ENST00000347652 KRTAP13-4Q3LI77 160 aa2.28□□□□□ -2.04
VCAM1-202ENST00000347652 SPRR2GQ9BYE4 73 aa2.25□□□□□ -2.05
VCAM1-202ENST00000347652 PP632Q6XCG6 107 aa2.25□□□□□ -2.05
VCAM1-202ENST00000347652 LCE1EQ5T753 118 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms