RNA–Protein interactions for RNA: ENST00000347140.7

R3HDM2-201, Transcript of R3H domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene R3HDM2, Length 4,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-201ENST00000347140 M0QZ58 72 aa7.9□□□□□ -1.15
R3HDM2-201ENST00000347140 VPS13BQ7Z7G8 4022 aa7.88□□□□□ -1.15
R3HDM2-201ENST00000347140 KRTAP3-3Q9BYR6 98 aa7.87□□□□□ -1.15
R3HDM2-201ENST00000347140 XP32Q5T750 250 aa7.87□□□□□ -1.15
R3HDM2-201ENST00000347140 J3QL48 77 aa7.86□□□□□ -1.15
R3HDM2-201ENST00000347140 KRTAP3-2Q9BYR7 98 aa7.85□□□□□ -1.15
R3HDM2-201ENST00000347140 KRTAP12-2P59991 146 aa7.84□□□□□ -1.15
R3HDM2-201ENST00000347140 Q5VSD8 79 aa7.82□□□□□ -1.16
R3HDM2-201ENST00000347140 KRTAP10-8P60410 259 aa7.81□□□□□ -1.16
R3HDM2-201ENST00000347140 KRTAP10-4P60372 401 aaPredicted RBP7.76□□□□□ -1.17
R3HDM2-201ENST00000347140 A0A1B0GVY2 172 aa7.76□□□□□ -1.17
R3HDM2-201ENST00000347140 KRTAP12-1P59990 96 aa7.75□□□□□ -1.17
R3HDM2-201ENST00000347140 KRTAP15-1Q3LI76 137 aa7.7□□□□□ -1.18
R3HDM2-201ENST00000347140 SACSQ9NZJ4 4579 aa7.69□□□□□ -1.18
R3HDM2-201ENST00000347140 PKD1P98161 4303 aa7.63□□□□□ -1.19
R3HDM2-201ENST00000347140 FAT1Q14517 4588 aa7.63□□□□□ -1.19
R3HDM2-201ENST00000347140 DYNC1H1Q14204 4646 aaKnown RBP7.6□□□□□ -1.19
R3HDM2-201ENST00000347140 FAT2Q9NYQ8 4349 aa7.6□□□□□ -1.19
R3HDM2-201ENST00000347140 HYDINQ4G0P3 5121 aa7.57□□□□□ -1.2
R3HDM2-201ENST00000347140 M0R2T5 61 aa7.56□□□□□ -1.2
R3HDM2-201ENST00000347140 KRTAP21-3Q3LHN1 58 aa7.5□□□□□ -1.21
R3HDM2-201ENST00000347140 DNHD1Q96M86 4753 aa7.5□□□□□ -1.21
R3HDM2-201ENST00000347140 PKHD1P08F94 4074 aa7.47□□□□□ -1.21
R3HDM2-201ENST00000347140 TNP1P09430 55 aa7.41□□□□□ -1.22
R3HDM2-201ENST00000347140 PP632Q6XCG6 107 aa7.41□□□□□ -1.22
R3HDM2-201ENST00000347140 PKHD1L1Q86WI1 4243 aa7.39□□□□□ -1.23
R3HDM2-201ENST00000347140 APOBP04114 4563 aaKnown RBP7.39□□□□□ -1.23
R3HDM2-201ENST00000347140 FAT3Q8TDW7 4589 aa7.33□□□□□ -1.24
R3HDM2-201ENST00000347140 MYCBP2O75592 4640 aa7.32□□□□□ -1.24
R3HDM2-201ENST00000347140 MT1HL1P0DM35 61 aa7.3□□□□□ -1.24
R3HDM2-201ENST00000347140 LRP1Q07954 4544 aaKnown RBP7.28□□□□□ -1.24
R3HDM2-201ENST00000347140 HSPG2P98160 4391 aa7.2□□□□□ -1.26
R3HDM2-201ENST00000347140 LORP23490 312 aaPredicted RBP7.14□□□□□ -1.27
R3HDM2-201ENST00000347140 TNXBP22105 4242 aa7.08□□□□□ -1.28
R3HDM2-201ENST00000347140 RYR2Q92736 4967 aa6.99□□□□□ -1.29
R3HDM2-201ENST00000347140 LRP2P98164 4655 aa6.97□□□□□ -1.29
R3HDM2-201ENST00000347140 KRTAP17-1Q9BYP8 105 aa6.95□□□□□ -1.3
R3HDM2-201ENST00000347140 KMT2CQ8NEZ4 4911 aaKnown RBP6.94□□□□□ -1.3
R3HDM2-201ENST00000347140 RYR1P21817 5038 aa6.9□□□□□ -1.3
R3HDM2-201ENST00000347140 KIAA1109Q2LD37 5005 aa6.86□□□□□ -1.31
R3HDM2-201ENST00000347140 KRTAP4-1Q9BYQ7 146 aa6.84□□□□□ -1.31
R3HDM2-201ENST00000347140 LPAP08519 4548 aa6.8□□□□□ -1.32
R3HDM2-201ENST00000347140 KRTAP4-5Q9BYR2 181 aa6.8□□□□□ -1.32
R3HDM2-201ENST00000347140 PRO2289Q9P1D8 64 aa6.8□□□□□ -1.32
R3HDM2-201ENST00000347140 RYR3Q15413 4870 aa6.79□□□□□ -1.32
R3HDM2-201ENST00000347140 KRTAP23-1A1A580 65 aa6.75□□□□□ -1.33
R3HDM2-201ENST00000347140 INE1O15225 51 aa6.74□□□□□ -1.33
R3HDM2-201ENST00000347140 SPRR5A0A1B0GTR4 108 aa6.51□□□□□ -1.37
R3HDM2-201ENST00000347140 KRTAP10-10P60014 251 aa6.5□□□□□ -1.37
R3HDM2-201ENST00000347140 KRTAP19-2Q3LHN2 52 aa6.5□□□□□ -1.37
R3HDM2-201ENST00000347140 LCE3AQ5TA76 89 aa6.49□□□□□ -1.37
R3HDM2-201ENST00000347140 ABCA13Q86UQ4 5058 aa6.45□□□□□ -1.38
R3HDM2-201ENST00000347140 MUC17Q685J3 4493 aa6.45□□□□□ -1.38
R3HDM2-201ENST00000347140 SPRR2GQ9BYE4 73 aa6.38□□□□□ -1.39
R3HDM2-201ENST00000347140 FLGP20930 4061 aaPredicted RBP6.32□□□□□ -1.4
R3HDM2-201ENST00000347140 EPPK1P58107 5090 aaKnown RBP6.3□□□□□ -1.4
R3HDM2-201ENST00000347140 KRTAP19-1Q8IUB9 90 aa6.27□□□□□ -1.41
R3HDM2-201ENST00000347140 KRTAP12-3P60328 96 aa6.24□□□□□ -1.41
R3HDM2-201ENST00000347140 HERC2O95714 4834 aa6.23□□□□□ -1.41
R3HDM2-201ENST00000347140 KRTAP10-12P60413 245 aa6.23□□□□□ -1.41
R3HDM2-201ENST00000347140 HERC1Q15751 4861 aa6.2□□□□□ -1.42
R3HDM2-201ENST00000347140 KRTAP8-1Q8IUC2 63 aa6.2□□□□□ -1.42
R3HDM2-201ENST00000347140 MT2AP02795 61 aa6.13□□□□□ -1.43
R3HDM2-201ENST00000347140 MT1FP04733 61 aa6.13□□□□□ -1.43
R3HDM2-201ENST00000347140 MUC2Q02817 5179 aa6.12□□□□□ -1.43
R3HDM2-201ENST00000347140 MT1HP80294 61 aa6.12□□□□□ -1.43
R3HDM2-201ENST00000347140 LCE2CQ5TA81 110 aa6.11□□□□□ -1.43
R3HDM2-201ENST00000347140 BIRC6Q9NR09 4857 aa6.08□□□□□ -1.44
R3HDM2-201ENST00000347140 KRTAP19-8Q3LI54 63 aa6□□□□□ -1.45
R3HDM2-201ENST00000347140 KRTAP10-5P60370 271 aa5.96□□□□□ -1.45
R3HDM2-201ENST00000347140 MT1XP80297 61 aa5.96□□□□□ -1.45
R3HDM2-201ENST00000347140 MT1BP07438 61 aa5.92□□□□□ -1.46
R3HDM2-201ENST00000347140 KRTAP9-8Q9BYQ0 159 aa5.91□□□□□ -1.46
R3HDM2-201ENST00000347140 PCLOQ9Y6V0 5065 aa5.89□□□□□ -1.47
R3HDM2-201ENST00000347140 KRTAP10-7P60409 375 aaPredicted RBP5.89□□□□□ -1.47
R3HDM2-201ENST00000347140 FAT4Q6V0I7 4981 aa5.88□□□□□ -1.47
R3HDM2-201ENST00000347140 CRCT1Q9UGL9 99 aa5.87□□□□□ -1.47
R3HDM2-201ENST00000347140 HMCN2Q8NDA2 5059 aa5.82□□□□□ -1.48
R3HDM2-201ENST00000347140 KRTAP19-5Q3LI72 72 aa5.79□□□□□ -1.48
R3HDM2-201ENST00000347140 LCE3CQ5T5A8 94 aa5.79□□□□□ -1.48
R3HDM2-201ENST00000347140 RNF213Q63HN8 5207 aa5.66□□□□□ -1.5
R3HDM2-201ENST00000347140 KRTAP9-3Q9BYQ3 159 aa5.66□□□□□ -1.5
R3HDM2-201ENST00000347140 UBR4Q5T4S7 5183 aa5.58□□□□□ -1.52
R3HDM2-201ENST00000347140 KRTAP4-8A0A0G2JLE6 195 aa5.48□□□□□ -1.53
R3HDM2-201ENST00000347140 KRTAP4-8Q9BYQ9 185 aa5.48□□□□□ -1.53
R3HDM2-201ENST00000347140 SYNE1Q8NF91 8797 aaKnown RBP5.42□□□□□ -1.54
R3HDM2-201ENST00000347140 LCE2BO14633 110 aa5.4□□□□□ -1.54
R3HDM2-201ENST00000347140 KRTAP4-7Q9BYR0 210 aa5.37□□□□□ -1.55
R3HDM2-201ENST00000347140 KRTAP9-6A8MVA2 160 aa5.37□□□□□ -1.55
R3HDM2-201ENST00000347140 KRTAP19-4Q3LI73 84 aa5.35□□□□□ -1.55
R3HDM2-201ENST00000347140 KRTAP2-3P0C7H8 128 aa5.32□□□□□ -1.56
R3HDM2-201ENST00000347140 KRTAP2-4Q9BYR9 128 aa5.32□□□□□ -1.56
R3HDM2-201ENST00000347140 KRTAP2-1Q9BYU5 128 aa5.32□□□□□ -1.56
R3HDM2-201ENST00000347140 KRTAP19-7Q3SYF9 63 aa5.25□□□□□ -1.57
R3HDM2-201ENST00000347140 MT1LQ93083 61 aa5.23□□□□□ -1.57
R3HDM2-201ENST00000347140 KMT2DO14686 5537 aa5.19□□□□□ -1.58
R3HDM2-201ENST00000347140 MT1EP04732 61 aa5.17□□□□□ -1.58
R3HDM2-201ENST00000347140 OBSCNQ5VST9 7968 aa5.14□□□□□ -1.59
R3HDM2-201ENST00000347140 USH2AO75445 5202 aa5.09□□□□□ -1.59
R3HDM2-201ENST00000347140 KRTAP12-4P60329 112 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms