RNA–Protein interactions for RNA: ENST00000345080.4

LIN28B-201, Transcript of lin-28 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28B, Length 5,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-201ENST00000345080 MEGF8Q7Z7M0 2845 aa3.7□□□□□ -1.82
LIN28B-201ENST00000345080 STARD9Q9P2P6 4700 aa3.67□□□□□ -1.82
LIN28B-201ENST00000345080 DNAH10Q8IVF4 4471 aa3.66□□□□□ -1.82
LIN28B-201ENST00000345080 PLECQ15149 4684 aaKnown RBP3.65□□□□□ -1.82
LIN28B-201ENST00000345080 KRTAP3-2Q9BYR7 98 aa3.63□□□□□ -1.83
LIN28B-201ENST00000345080 FRAS1Q86XX4 4008 aa3.62□□□□□ -1.83
LIN28B-201ENST00000345080 KMT2AQ03164 3969 aa3.62□□□□□ -1.83
LIN28B-201ENST00000345080 DNAH2Q9P225 4427 aa3.62□□□□□ -1.83
LIN28B-201ENST00000345080 FBN3Q75N90 2809 aa3.6□□□□□ -1.83
LIN28B-201ENST00000345080 HYDINQ4G0P3 5121 aa3.6□□□□□ -1.83
LIN28B-201ENST00000345080 ALMS1Q8TCU4 4167 aa3.59□□□□□ -1.83
LIN28B-201ENST00000345080 VPS13DQ5THJ4 4388 aa3.59□□□□□ -1.84
LIN28B-201ENST00000345080 HECTD4Q9Y4D8 3996 aa3.56□□□□□ -1.84
LIN28B-201ENST00000345080 TENM2Q9NT68 2774 aa3.55□□□□□ -1.84
LIN28B-201ENST00000345080 KRTAP3-3Q9BYR6 98 aa3.54□□□□□ -1.84
LIN28B-201ENST00000345080 PKD1P98161 4303 aa3.53□□□□□ -1.84
LIN28B-201ENST00000345080 CRCT1Q9UGL9 99 aa3.52□□□□□ -1.85
LIN28B-201ENST00000345080 FAT2Q9NYQ8 4349 aa3.52□□□□□ -1.85
LIN28B-201ENST00000345080 DNAH6Q9C0G6 4158 aa3.5□□□□□ -1.85
LIN28B-201ENST00000345080 DNAH11Q96DT5 4516 aa3.5□□□□□ -1.85
LIN28B-201ENST00000345080 KMT2CQ8NEZ4 4911 aaKnown RBP3.5□□□□□ -1.85
LIN28B-201ENST00000345080 SACSQ9NZJ4 4579 aa3.5□□□□□ -1.85
LIN28B-201ENST00000345080 MT1HL1P0DM35 61 aa3.48□□□□□ -1.85
LIN28B-201ENST00000345080 RYR3Q15413 4870 aa3.46□□□□□ -1.86
LIN28B-201ENST00000345080 PKHD1P08F94 4074 aa3.45□□□□□ -1.86
LIN28B-201ENST00000345080 DNAH5Q8TE73 4624 aa3.45□□□□□ -1.86
LIN28B-201ENST00000345080 DNAH8Q96JB1 4490 aa3.45□□□□□ -1.86
LIN28B-201ENST00000345080 DNAH17Q9UFH2 4485 aa3.45□□□□□ -1.86
LIN28B-201ENST00000345080 KRTAP4-5Q9BYR2 181 aa3.42□□□□□ -1.86
LIN28B-201ENST00000345080 KRTAP10-4P60372 401 aaPredicted RBP3.41□□□□□ -1.86
LIN28B-201ENST00000345080 RYR2Q92736 4967 aa3.41□□□□□ -1.86
LIN28B-201ENST00000345080 KRTAP10-5P60370 271 aa3.39□□□□□ -1.87
LIN28B-201ENST00000345080 KRTAP8-1Q8IUC2 63 aa3.36□□□□□ -1.87
LIN28B-201ENST00000345080 LORP23490 312 aaPredicted RBP3.34□□□□□ -1.87
LIN28B-201ENST00000345080 VPS13BQ7Z7G8 4022 aa3.33□□□□□ -1.88
LIN28B-201ENST00000345080 LRP1BQ9NZR2 4599 aa3.31□□□□□ -1.88
LIN28B-201ENST00000345080 EPPK1P58107 5090 aaKnown RBP3.29□□□□□ -1.88
LIN28B-201ENST00000345080 APOBP04114 4563 aaKnown RBP3.28□□□□□ -1.88
LIN28B-201ENST00000345080 KRTAP12-3P60328 96 aa3.27□□□□□ -1.89
LIN28B-201ENST00000345080 SPRR5A0A1B0GTR4 108 aa3.27□□□□□ -1.89
LIN28B-201ENST00000345080 KRTAP10-12P60413 245 aa3.27□□□□□ -1.89
LIN28B-201ENST00000345080 DYNC1H1Q14204 4646 aaKnown RBP3.26□□□□□ -1.89
LIN28B-201ENST00000345080 LCE3AQ5TA76 89 aa3.23□□□□□ -1.89
LIN28B-201ENST00000345080 PKHD1L1Q86WI1 4243 aa3.23□□□□□ -1.89
LIN28B-201ENST00000345080 HSPG2P98160 4391 aa3.22□□□□□ -1.89
LIN28B-201ENST00000345080 FAT1Q14517 4588 aa3.2□□□□□ -1.9
LIN28B-201ENST00000345080 FAT3Q8TDW7 4589 aa3.17□□□□□ -1.9
LIN28B-201ENST00000345080 MT1HP80294 61 aa3.16□□□□□ -1.9
LIN28B-201ENST00000345080 SPRR2EP22531 72 aa3.15□□□□□ -1.91
LIN28B-201ENST00000345080 SPRR2BP35325 72 aa3.15□□□□□ -1.91
LIN28B-201ENST00000345080 SPRR2AP35326 72 aa3.15□□□□□ -1.91
LIN28B-201ENST00000345080 TNXBP22105 4242 aa3.14□□□□□ -1.91
LIN28B-201ENST00000345080 KRTAP17-1Q9BYP8 105 aa3.13□□□□□ -1.91
LIN28B-201ENST00000345080 RYR1P21817 5038 aa3.13□□□□□ -1.91
LIN28B-201ENST00000345080 KRTAP10-7P60409 375 aaPredicted RBP3.13□□□□□ -1.91
LIN28B-201ENST00000345080 LRP1Q07954 4544 aaKnown RBP3.12□□□□□ -1.91
LIN28B-201ENST00000345080 SPRR2FQ96RM1 72 aa3.12□□□□□ -1.91
LIN28B-201ENST00000345080 KIAA1109Q2LD37 5005 aa3.12□□□□□ -1.91
LIN28B-201ENST00000345080 MYCBP2O75592 4640 aa3.11□□□□□ -1.91
LIN28B-201ENST00000345080 SPRR2DP22532 72 aa3.1□□□□□ -1.91
LIN28B-201ENST00000345080 KRTAP19-4Q3LI73 84 aa3.1□□□□□ -1.91
LIN28B-201ENST00000345080 KRTAP9-6A0A140TA67 174 aa3.09□□□□□ -1.91
LIN28B-201ENST00000345080 ABCA13Q86UQ4 5058 aa3.08□□□□□ -1.92
LIN28B-201ENST00000345080 HERC1Q15751 4861 aa3.06□□□□□ -1.92
LIN28B-201ENST00000345080 PCLOQ9Y6V0 5065 aa3.04□□□□□ -1.92
LIN28B-201ENST00000345080 SPRR2GQ9BYE4 73 aa3.03□□□□□ -1.92
LIN28B-201ENST00000345080 HERC2O95714 4834 aa3.02□□□□□ -1.93
LIN28B-201ENST00000345080 BIRC6Q9NR09 4857 aa2.99□□□□□ -1.93
LIN28B-201ENST00000345080 KRTAP9-2Q9BYQ4 174 aa2.99□□□□□ -1.93
LIN28B-201ENST00000345080 MT2AP02795 61 aa2.98□□□□□ -1.93
LIN28B-201ENST00000345080 LCE2BO14633 110 aa2.98□□□□□ -1.93
LIN28B-201ENST00000345080 LPAP08519 4548 aa2.98□□□□□ -1.93
LIN28B-201ENST00000345080 LCE2CQ5TA81 110 aa2.97□□□□□ -1.93
LIN28B-201ENST00000345080 LCE2DQ5TA82 110 aaPredicted RBP2.97□□□□□ -1.93
LIN28B-201ENST00000345080 KRTAP20-1Q3LI63 56 aa2.93□□□□□ -1.94
LIN28B-201ENST00000345080 KRTAP12-4P60329 112 aa2.91□□□□□ -1.94
LIN28B-201ENST00000345080 LCE3CQ5T5A8 94 aa2.91□□□□□ -1.94
LIN28B-201ENST00000345080 KRTAP4-1Q9BYQ7 146 aa2.9□□□□□ -1.94
LIN28B-201ENST00000345080 LRP2P98164 4655 aa2.86□□□□□ -1.95
LIN28B-201ENST00000345080 KRTAP19-8Q3LI54 63 aa2.85□□□□□ -1.95
LIN28B-201ENST00000345080 KRTAP19-1Q8IUB9 90 aa2.85□□□□□ -1.95
LIN28B-201ENST00000345080 MT1FP04733 61 aa2.84□□□□□ -1.96
LIN28B-201ENST00000345080 HMCN2Q8NDA2 5059 aa2.84□□□□□ -1.96
LIN28B-201ENST00000345080 MUC2Q02817 5179 aa2.83□□□□□ -1.96
LIN28B-201ENST00000345080 MUC17Q685J3 4493 aa2.81□□□□□ -1.96
LIN28B-201ENST00000345080 KRTAP9-7A8MTY7 169 aa2.79□□□□□ -1.96
LIN28B-201ENST00000345080 SYNE1Q8NF91 8797 aaKnown RBP2.78□□□□□ -1.96
LIN28B-201ENST00000345080 LCE3BQ5TA77 95 aa2.76□□□□□ -1.97
LIN28B-201ENST00000345080 UBR4Q5T4S7 5183 aa2.74□□□□□ -1.97
LIN28B-201ENST00000345080 KRTAP19-5Q3LI72 72 aa2.74□□□□□ -1.97
LIN28B-201ENST00000345080 KRTAP2-3P0C7H8 128 aa2.74□□□□□ -1.97
LIN28B-201ENST00000345080 KRTAP2-4Q9BYR9 128 aa2.74□□□□□ -1.97
LIN28B-201ENST00000345080 RNF213Q63HN8 5207 aa2.73□□□□□ -1.97
LIN28B-201ENST00000345080 FLGP20930 4061 aaPredicted RBP2.71□□□□□ -1.98
LIN28B-201ENST00000345080 KRTAP6-3Q3LI67 103 aa2.71□□□□□ -1.98
LIN28B-201ENST00000345080 FAT4Q6V0I7 4981 aa2.68□□□□□ -1.98
LIN28B-201ENST00000345080 MT1XP80297 61 aa2.68□□□□□ -1.98
LIN28B-201ENST00000345080 MT1GP13640 62 aa2.67□□□□□ -1.98
LIN28B-201ENST00000345080 KRTAP19-6Q3LI70 58 aa2.65□□□□□ -1.98
LIN28B-201ENST00000345080 KRTAP19-2Q3LHN2 52 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms