RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 A0A087WVE0 104 aa6□□□□□ -1.45
SNCA-202ENST00000345009 MPLKIPQ8TAP9 179 aa6□□□□□ -1.45
SNCA-202ENST00000345009 M0R2T5 61 aa5.99□□□□□ -1.45
SNCA-202ENST00000345009 UQCRQO14949 82 aa5.99□□□□□ -1.45
SNCA-202ENST00000345009 C4orf26Q17RF5 130 aa5.98□□□□□ -1.45
SNCA-202ENST00000345009 IMUPQ9GZP8 106 aa5.98□□□□□ -1.45
SNCA-202ENST00000345009 TRAV22A0A0B4J277 110 aa5.97□□□□□ -1.45
SNCA-202ENST00000345009 MT1HP80294 61 aa5.97□□□□□ -1.45
SNCA-202ENST00000345009 ATOX1O00244 68 aa5.96□□□□□ -1.46
SNCA-202ENST00000345009 FLGP20930 4061 aaPredicted RBP5.96□□□□□ -1.46
SNCA-202ENST00000345009 LOC101927531A0A1B0GV80 90 aa5.92□□□□□ -1.46
SNCA-202ENST00000345009 CCDC179H3BU77 68 aa5.92□□□□□ -1.46
SNCA-202ENST00000345009 H0Y9P7 68 aa5.91□□□□□ -1.46
SNCA-202ENST00000345009 MT-ATP8P03928 68 aa5.91□□□□□ -1.46
SNCA-202ENST00000345009 MP68P56378 58 aa5.91□□□□□ -1.46
SNCA-202ENST00000345009 TMEM258P61165 79 aa5.91□□□□□ -1.46
SNCA-202ENST00000345009 OCR1Q9BZK8 76 aa5.89□□□□□ -1.47
SNCA-202ENST00000345009 CYP4F30PQ9H0H9 118 aa5.89□□□□□ -1.47
SNCA-202ENST00000345009 PMAIP1Q13794 54 aa5.88□□□□□ -1.47
SNCA-202ENST00000345009 H1FX-AS1Q4G0G2 97 aa5.87□□□□□ -1.47
SNCA-202ENST00000345009 C1orf64Q8NEQ6 169 aa5.87□□□□□ -1.47
SNCA-202ENST00000345009 LINC00208Q96KT6 92 aa5.85□□□□□ -1.47
SNCA-202ENST00000345009 H3BPC8 53 aa5.84□□□□□ -1.47
SNCA-202ENST00000345009 FAM236AA0A1B0GUQ0 79 aa5.83□□□□□ -1.48
SNCA-202ENST00000345009 FAM236BA0A1B0GV22 79 aa5.83□□□□□ -1.48
SNCA-202ENST00000345009 KRTAP10-6P60371 365 aaPredicted RBP5.82□□□□□ -1.48
SNCA-202ENST00000345009 TRAV7A0A075B6U4 112 aa5.79□□□□□ -1.48
SNCA-202ENST00000345009 SMIM26A0A096LP01 95 aa5.75□□□□□ -1.49
SNCA-202ENST00000345009 COX7CP15954 63 aa5.74□□□□□ -1.49
SNCA-202ENST00000345009 A8MUN3 132 aa5.73□□□□□ -1.49
SNCA-202ENST00000345009 SERP1Q9Y6X1 66 aa5.73□□□□□ -1.49
SNCA-202ENST00000345009 S4R3F8 94 aa5.73□□□□□ -1.49
SNCA-202ENST00000345009 KLKP1Q107X0 134 aa5.72□□□□□ -1.49
SNCA-202ENST00000345009 BRK1Q8WUW1 75 aa5.71□□□□□ -1.5
SNCA-202ENST00000345009 CSAG1Q6PB30 78 aa5.7□□□□□ -1.5
SNCA-202ENST00000345009 SERP2Q8N6R1 65 aa5.7□□□□□ -1.5
SNCA-202ENST00000345009 ATP5EP56381 51 aaPredicted RBP5.68□□□□□ -1.5
SNCA-202ENST00000345009 LCA10Q71F78 164 aa5.66□□□□□ -1.5
SNCA-202ENST00000345009 KRTAP10-10P60014 251 aa5.65□□□□□ -1.5
SNCA-202ENST00000345009 NDUFC1O43677 76 aa5.64□□□□□ -1.51
SNCA-202ENST00000345009 MT2AP02795 61 aa5.63□□□□□ -1.51
SNCA-202ENST00000345009 C20orf197Q8N268 126 aa5.62□□□□□ -1.51
SNCA-202ENST00000345009 SNURFQ9Y675 71 aa5.61□□□□□ -1.51
SNCA-202ENST00000345009 DMAC1Q96GE9 116 aa5.6□□□□□ -1.51
SNCA-202ENST00000345009 ACYP2P14621 99 aa5.58□□□□□ -1.52
SNCA-202ENST00000345009 KTN1-AS1Q86SY8 53 aa5.58□□□□□ -1.52
SNCA-202ENST00000345009 MT1FP04733 61 aa5.57□□□□□ -1.52
SNCA-202ENST00000345009 LCE1AQ5T7P2 110 aa5.56□□□□□ -1.52
SNCA-202ENST00000345009 SPANXA2-OT1Q8N9U9 137 aa5.55□□□□□ -1.52
SNCA-202ENST00000345009 A0A0A0MQY5 61 aa5.51□□□□□ -1.53
SNCA-202ENST00000345009 SPTSSBQ8NFR3 76 aa5.51□□□□□ -1.53
SNCA-202ENST00000345009 CHKB-CPT1BH3BT56 60 aa5.49□□□□□ -1.53
SNCA-202ENST00000345009 H0YAA0 97 aa5.48□□□□□ -1.53
SNCA-202ENST00000345009 FSIP2Q5CZC0 6907 aa5.45□□□□□ -1.54
SNCA-202ENST00000345009 CRIPTQ9P021 101 aa5.44□□□□□ -1.54
SNCA-202ENST00000345009 CRCT1Q9UGL9 99 aa5.42□□□□□ -1.54
SNCA-202ENST00000345009 H7BZZ5 65 aa5.41□□□□□ -1.54
SNCA-202ENST00000345009 ADM2Q7Z4H4 148 aa5.41□□□□□ -1.54
SNCA-202ENST00000345009 SPRR2GQ9BYE4 73 aa5.35□□□□□ -1.55
SNCA-202ENST00000345009 CYSTM1Q9H1C7 97 aa5.35□□□□□ -1.55
SNCA-202ENST00000345009 USH2AO75445 5202 aa5.35□□□□□ -1.55
SNCA-202ENST00000345009 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.34□□□□□ -1.55
SNCA-202ENST00000345009 COA5Q86WW8 74 aa5.34□□□□□ -1.55
SNCA-202ENST00000345009 PSPHP1O15172 72 aa5.33□□□□□ -1.56
SNCA-202ENST00000345009 Q1T7F1 81 aa5.32□□□□□ -1.56
SNCA-202ENST00000345009 R4GN34 69 aa5.3□□□□□ -1.56
SNCA-202ENST00000345009 Q5VV11 94 aa5.29□□□□□ -1.56
SNCA-202ENST00000345009 P0C880 135 aa5.28□□□□□ -1.56
SNCA-202ENST00000345009 LINC01554Q52M75 96 aa5.27□□□□□ -1.57
SNCA-202ENST00000345009 KRTAP19-8Q3LI54 63 aa5.25□□□□□ -1.57
SNCA-202ENST00000345009 SSPOA2VEC9 5147 aa5.25□□□□□ -1.57
SNCA-202ENST00000345009 M0QZ58 72 aa5.24□□□□□ -1.57
SNCA-202ENST00000345009 KRTAP19-6Q3LI70 58 aa5.2□□□□□ -1.58
SNCA-202ENST00000345009 KRTAP2-2Q9BYT5 123 aa5.2□□□□□ -1.58
SNCA-202ENST00000345009 A6NN06 94 aa5.18□□□□□ -1.58
SNCA-202ENST00000345009 MT1BP07438 61 aa5.17□□□□□ -1.58
SNCA-202ENST00000345009 PLAC4Q8WY50 150 aa5.17□□□□□ -1.58
SNCA-202ENST00000345009 A0A1B0GU69 56 aa5.12□□□□□ -1.59
SNCA-202ENST00000345009 FCGBPQ9Y6R7 5405 aaPredicted RBP5.12□□□□□ -1.59
SNCA-202ENST00000345009 CDC42SE1Q9NRR8 79 aa5.11□□□□□ -1.59
SNCA-202ENST00000345009 KRTAP5-11Q6L8G4 156 aa5.1□□□□□ -1.59
SNCA-202ENST00000345009 PRR15LQ9BU68 103 aa5.09□□□□□ -1.59
SNCA-202ENST00000345009 A0A1B0GU33 70 aa5.08□□□□□ -1.6
SNCA-202ENST00000345009 PRO2289Q9P1D8 64 aa5.07□□□□□ -1.6
SNCA-202ENST00000345009 KRTAP10-7P60409 375 aaPredicted RBP5.06□□□□□ -1.6
SNCA-202ENST00000345009 A6NED7 52 aa5.04□□□□□ -1.6
SNCA-202ENST00000345009 MT3P25713 68 aa5.04□□□□□ -1.6
SNCA-202ENST00000345009 KRTAP10-5P60370 271 aa5.04□□□□□ -1.6
SNCA-202ENST00000345009 LINC01558Q9Y6Z2 57 aa5.02□□□□□ -1.61
SNCA-202ENST00000345009 KRTAP13-4Q3LI77 160 aa5□□□□□ -1.61
SNCA-202ENST00000345009 SPATA8Q6RVD6 105 aa4.97□□□□□ -1.61
SNCA-202ENST00000345009 A0A0D9SG42 100 aa4.96□□□□□ -1.62
SNCA-202ENST00000345009 K7ERS5 55 aa4.96□□□□□ -1.62
SNCA-202ENST00000345009 MT1XP80297 61 aa4.93□□□□□ -1.62
SNCA-202ENST00000345009 CAMK2N1Q7Z7J9 78 aa4.93□□□□□ -1.62
SNCA-202ENST00000345009 MACF1Q9UPN3 7388 aaKnown RBP4.9□□□□□ -1.62
SNCA-202ENST00000345009 UQCR11O14957 56 aa4.9□□□□□ -1.63
SNCA-202ENST00000345009 SPINT4Q6UDR6 99 aa4.9□□□□□ -1.63
SNCA-202ENST00000345009 ROMO1P60602 79 aa4.84□□□□□ -1.63
SNCA-202ENST00000345009 KRTAP12-1P59990 96 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms