RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 DNAH6Q9C0G6 4158 aa3.95□□□□□ -1.78
MCPH1-201ENST00000344683 SRRM2Q9UQ35 2752 aaKnown RBP3.93□□□□□ -1.78
MCPH1-201ENST00000344683 VPS13DQ5THJ4 4388 aa3.91□□□□□ -1.78
MCPH1-201ENST00000344683 KRTAP23-1A1A580 65 aa3.89□□□□□ -1.79
MCPH1-201ENST00000344683 TENM2Q9NT68 2774 aa3.89□□□□□ -1.79
MCPH1-201ENST00000344683 KRTAP10-6P60371 365 aaPredicted RBP3.87□□□□□ -1.79
MCPH1-201ENST00000344683 KRTAP3-1Q9BYR8 98 aa3.87□□□□□ -1.79
MCPH1-201ENST00000344683 VPS13BQ7Z7G8 4022 aa3.85□□□□□ -1.79
MCPH1-201ENST00000344683 STARD9Q9P2P6 4700 aa3.83□□□□□ -1.8
MCPH1-201ENST00000344683 PLECQ15149 4684 aaKnown RBP3.83□□□□□ -1.8
MCPH1-201ENST00000344683 DNAH2Q9P225 4427 aa3.82□□□□□ -1.8
MCPH1-201ENST00000344683 PKD1P98161 4303 aa3.81□□□□□ -1.8
MCPH1-201ENST00000344683 FBN3Q75N90 2809 aa3.81□□□□□ -1.8
MCPH1-201ENST00000344683 DNAH8Q96JB1 4490 aa3.81□□□□□ -1.8
MCPH1-201ENST00000344683 KRTAP10-12P60413 245 aa3.81□□□□□ -1.8
MCPH1-201ENST00000344683 DNAH17Q9UFH2 4485 aa3.77□□□□□ -1.81
MCPH1-201ENST00000344683 FAT2Q9NYQ8 4349 aa3.76□□□□□ -1.81
MCPH1-201ENST00000344683 PKHD1P08F94 4074 aa3.76□□□□□ -1.81
MCPH1-201ENST00000344683 DNAH11Q96DT5 4516 aa3.75□□□□□ -1.81
MCPH1-201ENST00000344683 KRTAP12-3P60328 96 aa3.71□□□□□ -1.82
MCPH1-201ENST00000344683 HERC1Q15751 4861 aa3.7□□□□□ -1.82
MCPH1-201ENST00000344683 KRTAP3-2Q9BYR7 98 aa3.67□□□□□ -1.82
MCPH1-201ENST00000344683 DNAH5Q8TE73 4624 aa3.66□□□□□ -1.82
MCPH1-201ENST00000344683 CRCT1Q9UGL9 99 aa3.66□□□□□ -1.82
MCPH1-201ENST00000344683 MEGF8Q7Z7M0 2845 aa3.65□□□□□ -1.83
MCPH1-201ENST00000344683 KRTAP3-3Q9BYR6 98 aa3.64□□□□□ -1.83
MCPH1-201ENST00000344683 PKHD1L1Q86WI1 4243 aa3.62□□□□□ -1.83
MCPH1-201ENST00000344683 RYR1P21817 5038 aa3.6□□□□□ -1.83
MCPH1-201ENST00000344683 LCE3AQ5TA76 89 aa3.59□□□□□ -1.83
MCPH1-201ENST00000344683 BIRC6Q9NR09 4857 aa3.58□□□□□ -1.84
MCPH1-201ENST00000344683 KRTAP10-5P60370 271 aa3.57□□□□□ -1.84
MCPH1-201ENST00000344683 TNXBP22105 4242 aa3.51□□□□□ -1.85
MCPH1-201ENST00000344683 HYDINQ4G0P3 5121 aa3.5□□□□□ -1.85
MCPH1-201ENST00000344683 PCLOQ9Y6V0 5065 aa3.49□□□□□ -1.85
MCPH1-201ENST00000344683 SACSQ9NZJ4 4579 aa3.48□□□□□ -1.85
MCPH1-201ENST00000344683 KRTAP19-4Q3LI73 84 aa3.48□□□□□ -1.85
MCPH1-201ENST00000344683 APOBP04114 4563 aaKnown RBP3.44□□□□□ -1.86
MCPH1-201ENST00000344683 MT1HL1P0DM35 61 aa3.43□□□□□ -1.86
MCPH1-201ENST00000344683 LRP1BQ9NZR2 4599 aa3.42□□□□□ -1.86
MCPH1-201ENST00000344683 MYCBP2O75592 4640 aa3.42□□□□□ -1.86
MCPH1-201ENST00000344683 DNHD1Q96M86 4753 aa3.4□□□□□ -1.86
MCPH1-201ENST00000344683 RYR2Q92736 4967 aa3.4□□□□□ -1.87
MCPH1-201ENST00000344683 HSPG2P98160 4391 aa3.38□□□□□ -1.87
MCPH1-201ENST00000344683 KRTAP8-1Q8IUC2 63 aa3.37□□□□□ -1.87
MCPH1-201ENST00000344683 KRTAP10-4P60372 401 aaPredicted RBP3.37□□□□□ -1.87
MCPH1-201ENST00000344683 KMT2CQ8NEZ4 4911 aaKnown RBP3.36□□□□□ -1.87
MCPH1-201ENST00000344683 KRTAP4-5Q9BYR2 181 aa3.36□□□□□ -1.87
MCPH1-201ENST00000344683 HERC2O95714 4834 aa3.31□□□□□ -1.88
MCPH1-201ENST00000344683 LORP23490 312 aaPredicted RBP3.26□□□□□ -1.89
MCPH1-201ENST00000344683 LCE3CQ5T5A8 94 aa3.25□□□□□ -1.89
MCPH1-201ENST00000344683 FAT1Q14517 4588 aa3.25□□□□□ -1.89
MCPH1-201ENST00000344683 FAT3Q8TDW7 4589 aa3.24□□□□□ -1.89
MCPH1-201ENST00000344683 LPAP08519 4548 aa3.24□□□□□ -1.89
MCPH1-201ENST00000344683 DYNC1H1Q14204 4646 aaKnown RBP3.23□□□□□ -1.89
MCPH1-201ENST00000344683 LRP1Q07954 4544 aaKnown RBP3.23□□□□□ -1.89
MCPH1-201ENST00000344683 KRTAP10-7P60409 375 aaPredicted RBP3.22□□□□□ -1.89
MCPH1-201ENST00000344683 RYR3Q15413 4870 aa3.22□□□□□ -1.89
MCPH1-201ENST00000344683 SPRR2GQ9BYE4 73 aa3.17□□□□□ -1.9
MCPH1-201ENST00000344683 KIAA1109Q2LD37 5005 aa3.14□□□□□ -1.91
MCPH1-201ENST00000344683 KRTAP19-5Q3LI72 72 aa3.13□□□□□ -1.91
MCPH1-201ENST00000344683 ABCA13Q86UQ4 5058 aa3.12□□□□□ -1.91
MCPH1-201ENST00000344683 KRTAP17-1Q9BYP8 105 aa3.07□□□□□ -1.92
MCPH1-201ENST00000344683 MUC17Q685J3 4493 aa3.05□□□□□ -1.92
MCPH1-201ENST00000344683 KRTAP12-4P60329 112 aa3.05□□□□□ -1.92
MCPH1-201ENST00000344683 FLGP20930 4061 aaPredicted RBP3.03□□□□□ -1.92
MCPH1-201ENST00000344683 SPRR5A0A1B0GTR4 108 aa3.02□□□□□ -1.93
MCPH1-201ENST00000344683 SPRR2FQ96RM1 72 aa3.01□□□□□ -1.93
MCPH1-201ENST00000344683 MT1HP80294 61 aa3□□□□□ -1.93
MCPH1-201ENST00000344683 LRP2P98164 4655 aa3□□□□□ -1.93
MCPH1-201ENST00000344683 LCE3BQ5TA77 95 aa2.98□□□□□ -1.93
MCPH1-201ENST00000344683 MT3P25713 68 aa2.97□□□□□ -1.93
MCPH1-201ENST00000344683 MT2AP02795 61 aa2.95□□□□□ -1.94
MCPH1-201ENST00000344683 KRTAP19-8Q3LI54 63 aa2.92□□□□□ -1.94
MCPH1-201ENST00000344683 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
MCPH1-201ENST00000344683 KRTAP4-1Q9BYQ7 146 aa2.9□□□□□ -1.95
MCPH1-201ENST00000344683 EPPK1P58107 5090 aaKnown RBP2.88□□□□□ -1.95
MCPH1-201ENST00000344683 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
MCPH1-201ENST00000344683 MT1FP04733 61 aa2.86□□□□□ -1.95
MCPH1-201ENST00000344683 RNF213Q63HN8 5207 aa2.86□□□□□ -1.95
MCPH1-201ENST00000344683 SPRR2EP22531 72 aa2.83□□□□□ -1.96
MCPH1-201ENST00000344683 SPRR2BP35325 72 aa2.83□□□□□ -1.96
MCPH1-201ENST00000344683 SPRR2AP35326 72 aa2.83□□□□□ -1.96
MCPH1-201ENST00000344683 MT1GP13640 62 aa2.81□□□□□ -1.96
MCPH1-201ENST00000344683 HMCN2Q8NDA2 5059 aa2.81□□□□□ -1.96
MCPH1-201ENST00000344683 LCE2BO14633 110 aa2.8□□□□□ -1.96
MCPH1-201ENST00000344683 SPRR2DP22532 72 aa2.76□□□□□ -1.97
MCPH1-201ENST00000344683 KRTAP19-1Q8IUB9 90 aa2.75□□□□□ -1.97
MCPH1-201ENST00000344683 MT1XP80297 61 aa2.75□□□□□ -1.97
MCPH1-201ENST00000344683 KRTAP19-2Q3LHN2 52 aa2.73□□□□□ -1.97
MCPH1-201ENST00000344683 PRM1P04553 51 aa2.71□□□□□ -1.98
MCPH1-201ENST00000344683 LCE2DQ5TA82 110 aaPredicted RBP2.71□□□□□ -1.98
MCPH1-201ENST00000344683 MUC2Q02817 5179 aa2.71□□□□□ -1.98
MCPH1-201ENST00000344683 MT1LQ93083 61 aa2.69□□□□□ -1.98
MCPH1-201ENST00000344683 UBR4Q5T4S7 5183 aa2.69□□□□□ -1.98
MCPH1-201ENST00000344683 FAT4Q6V0I7 4981 aa2.65□□□□□ -1.98
MCPH1-201ENST00000344683 KRTAP9-6A0A140TA67 174 aa2.65□□□□□ -1.99
MCPH1-201ENST00000344683 LCE2CQ5TA81 110 aa2.64□□□□□ -1.99
MCPH1-201ENST00000344683 KRTAP9-2Q9BYQ4 174 aa2.63□□□□□ -1.99
MCPH1-201ENST00000344683 KRTAP9-3Q9BYQ3 159 aa2.6□□□□□ -1.99
MCPH1-201ENST00000344683 MT1BP07438 61 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms