RNA–Protein interactions for RNA: ENST00000343742.6

LRRK2-202, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 5 BASIC

Gene LRRK2, Length 4,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-202ENST00000343742 FRAS1Q86XX4 4008 aa6.33□□□□□ -1.4
LRRK2-202ENST00000343742 MT1HL1P0DM35 61 aa6.33□□□□□ -1.4
LRRK2-202ENST00000343742 ALMS1Q8TCU4 4167 aa6.3□□□□□ -1.4
LRRK2-202ENST00000343742 DYNC2H1Q8NCM8 4307 aaKnown RBP6.29□□□□□ -1.4
LRRK2-202ENST00000343742 HYDINQ4G0P3 5121 aa6.28□□□□□ -1.4
LRRK2-202ENST00000343742 KIAA1109Q2LD37 5005 aa6.27□□□□□ -1.41
LRRK2-202ENST00000343742 VPS13BQ7Z7G8 4022 aa6.25□□□□□ -1.41
LRRK2-202ENST00000343742 MYCBP2O75592 4640 aa6.25□□□□□ -1.41
LRRK2-202ENST00000343742 RYR1P21817 5038 aa6.25□□□□□ -1.41
LRRK2-202ENST00000343742 HECTD4Q9Y4D8 3996 aa6.19□□□□□ -1.42
LRRK2-202ENST00000343742 PKHD1P08F94 4074 aa6.17□□□□□ -1.42
LRRK2-202ENST00000343742 SACSQ9NZJ4 4579 aa6.17□□□□□ -1.42
LRRK2-202ENST00000343742 RYR3Q15413 4870 aa6.17□□□□□ -1.42
LRRK2-202ENST00000343742 LRP1Q07954 4544 aaKnown RBP6.15□□□□□ -1.43
LRRK2-202ENST00000343742 PLAC4Q8WY50 150 aa6.14□□□□□ -1.43
LRRK2-202ENST00000343742 C10orf95Q9H7T3 257 aa6.14□□□□□ -1.43
LRRK2-202ENST00000343742 KRTAP25-1Q3LHN0 102 aa6.13□□□□□ -1.43
LRRK2-202ENST00000343742 APOBP04114 4563 aaKnown RBP6.13□□□□□ -1.43
LRRK2-202ENST00000343742 FAT3Q8TDW7 4589 aa6.12□□□□□ -1.43
LRRK2-202ENST00000343742 FAT2Q9NYQ8 4349 aa6.12□□□□□ -1.43
LRRK2-202ENST00000343742 KMT2CQ8NEZ4 4911 aaKnown RBP6.11□□□□□ -1.43
LRRK2-202ENST00000343742 KRTAP13-4Q3LI77 160 aa6.04□□□□□ -1.44
LRRK2-202ENST00000343742 KRTAP17-1Q9BYP8 105 aa6.03□□□□□ -1.44
LRRK2-202ENST00000343742 RYR2Q92736 4967 aa6.02□□□□□ -1.45
LRRK2-202ENST00000343742 KRTAP10-10P60014 251 aa6.02□□□□□ -1.45
LRRK2-202ENST00000343742 KRTAP10-6P60371 365 aaPredicted RBP6.01□□□□□ -1.45
LRRK2-202ENST00000343742 KRTAP12-2P59991 146 aa6.01□□□□□ -1.45
LRRK2-202ENST00000343742 KRTAP3-3Q9BYR6 98 aa6□□□□□ -1.45
LRRK2-202ENST00000343742 LUZP6Q538Z0 58 aa5.97□□□□□ -1.45
LRRK2-202ENST00000343742 KRTAP12-1P59990 96 aa5.9□□□□□ -1.47
LRRK2-202ENST00000343742 KRTAP3-2Q9BYR7 98 aa5.89□□□□□ -1.47
LRRK2-202ENST00000343742 TNP1P09430 55 aa5.89□□□□□ -1.47
LRRK2-202ENST00000343742 PKD1P98161 4303 aa5.87□□□□□ -1.47
LRRK2-202ENST00000343742 LRP2P98164 4655 aa5.83□□□□□ -1.48
LRRK2-202ENST00000343742 HERC2O95714 4834 aa5.81□□□□□ -1.48
LRRK2-202ENST00000343742 KRTAP4-1Q9BYQ7 146 aa5.8□□□□□ -1.48
LRRK2-202ENST00000343742 HSPG2P98160 4391 aa5.8□□□□□ -1.48
LRRK2-202ENST00000343742 H3BS24 57 aa5.78□□□□□ -1.48
LRRK2-202ENST00000343742 EPPK1P58107 5090 aaKnown RBP5.75□□□□□ -1.49
LRRK2-202ENST00000343742 LORP23490 312 aaPredicted RBP5.75□□□□□ -1.49
LRRK2-202ENST00000343742 NDUFAF8A1L188 74 aa5.74□□□□□ -1.49
LRRK2-202ENST00000343742 LPAP08519 4548 aa5.67□□□□□ -1.5
LRRK2-202ENST00000343742 PP632Q6XCG6 107 aa5.61□□□□□ -1.51
LRRK2-202ENST00000343742 ABCA13Q86UQ4 5058 aa5.56□□□□□ -1.52
LRRK2-202ENST00000343742 BIRC6Q9NR09 4857 aa5.52□□□□□ -1.53
LRRK2-202ENST00000343742 PKHD1L1Q86WI1 4243 aa5.52□□□□□ -1.53
LRRK2-202ENST00000343742 PRO2289Q9P1D8 64 aa5.51□□□□□ -1.53
LRRK2-202ENST00000343742 TNXBP22105 4242 aa5.47□□□□□ -1.53
LRRK2-202ENST00000343742 A0A0A0MQY5 61 aa5.45□□□□□ -1.54
LRRK2-202ENST00000343742 MT1HP80294 61 aa5.39□□□□□ -1.55
LRRK2-202ENST00000343742 PCLOQ9Y6V0 5065 aa5.39□□□□□ -1.55
LRRK2-202ENST00000343742 MUC2Q02817 5179 aa5.39□□□□□ -1.55
LRRK2-202ENST00000343742 HERC1Q15751 4861 aa5.39□□□□□ -1.55
LRRK2-202ENST00000343742 RNF213Q63HN8 5207 aa5.31□□□□□ -1.56
LRRK2-202ENST00000343742 MT2AP02795 61 aa5.29□□□□□ -1.56
LRRK2-202ENST00000343742 MT1FP04733 61 aa5.27□□□□□ -1.57
LRRK2-202ENST00000343742 UBR4Q5T4S7 5183 aa5.21□□□□□ -1.58
LRRK2-202ENST00000343742 FAT4Q6V0I7 4981 aa5.21□□□□□ -1.58
LRRK2-202ENST00000343742 KRTAP10-12P60413 245 aa5.21□□□□□ -1.58
LRRK2-202ENST00000343742 LCE3AQ5TA76 89 aa5.2□□□□□ -1.58
LRRK2-202ENST00000343742 KRTAP15-1Q3LI76 137 aa5.17□□□□□ -1.58
LRRK2-202ENST00000343742 SPRR2GQ9BYE4 73 aa5.15□□□□□ -1.59
LRRK2-202ENST00000343742 LCE2CQ5TA81 110 aa5.13□□□□□ -1.59
LRRK2-202ENST00000343742 FSIP2Q5CZC0 6907 aa5.12□□□□□ -1.59
LRRK2-202ENST00000343742 KRTAP19-1Q8IUB9 90 aa5.1□□□□□ -1.59
LRRK2-202ENST00000343742 KRTAP12-3P60328 96 aa5.08□□□□□ -1.6
LRRK2-202ENST00000343742 KRTAP19-2Q3LHN2 52 aa5.07□□□□□ -1.6
LRRK2-202ENST00000343742 MUC17Q685J3 4493 aa5.05□□□□□ -1.6
LRRK2-202ENST00000343742 HMCN2Q8NDA2 5059 aa5.03□□□□□ -1.6
LRRK2-202ENST00000343742 KRTAP9-8Q9BYQ0 159 aa5.01□□□□□ -1.61
LRRK2-202ENST00000343742 FLGP20930 4061 aaPredicted RBP5□□□□□ -1.61
LRRK2-202ENST00000343742 CRCT1Q9UGL9 99 aa4.94□□□□□ -1.62
LRRK2-202ENST00000343742 KRTAP23-1A1A580 65 aa4.89□□□□□ -1.63
LRRK2-202ENST00000343742 MT1BP07438 61 aa4.87□□□□□ -1.63
LRRK2-202ENST00000343742 KRTAP10-7P60409 375 aaPredicted RBP4.87□□□□□ -1.63
LRRK2-202ENST00000343742 KRTAP19-8Q3LI54 63 aa4.85□□□□□ -1.63
LRRK2-202ENST00000343742 MT1XP80297 61 aa4.83□□□□□ -1.64
LRRK2-202ENST00000343742 KRTAP9-3Q9BYQ3 159 aa4.82□□□□□ -1.64
LRRK2-202ENST00000343742 KRTAP8-1Q8IUC2 63 aa4.81□□□□□ -1.64
LRRK2-202ENST00000343742 KRTAP10-5P60370 271 aa4.8□□□□□ -1.64
LRRK2-202ENST00000343742 KRTAP19-5Q3LI72 72 aa4.78□□□□□ -1.64
LRRK2-202ENST00000343742 KRTAP4-8A0A0G2JLE6 195 aa4.74□□□□□ -1.65
LRRK2-202ENST00000343742 LCE2BO14633 110 aa4.74□□□□□ -1.65
LRRK2-202ENST00000343742 KRTAP4-8Q9BYQ9 185 aa4.74□□□□□ -1.65
LRRK2-202ENST00000343742 USH2AO75445 5202 aa4.67□□□□□ -1.66
LRRK2-202ENST00000343742 SPRR2FQ96RM1 72 aa4.6□□□□□ -1.67
LRRK2-202ENST00000343742 LCE3CQ5T5A8 94 aa4.54□□□□□ -1.68
LRRK2-202ENST00000343742 LCE2AQ5TA79 106 aaPredicted RBP4.54□□□□□ -1.68
LRRK2-202ENST00000343742 KMT2DO14686 5537 aa4.46□□□□□ -1.69
LRRK2-202ENST00000343742 KRTAP4-7Q9BYR0 210 aa4.45□□□□□ -1.7
LRRK2-202ENST00000343742 DSTQ03001 7570 aaKnown RBP4.36□□□□□ -1.71
LRRK2-202ENST00000343742 OBSCNQ5VST9 7968 aa4.36□□□□□ -1.71
LRRK2-202ENST00000343742 INE1O15225 51 aa4.35□□□□□ -1.71
LRRK2-202ENST00000343742 MT1GP13640 62 aa4.33□□□□□ -1.72
LRRK2-202ENST00000343742 SYNE1Q8NF91 8797 aaKnown RBP4.32□□□□□ -1.72
LRRK2-202ENST00000343742 SPRR5A0A1B0GTR4 108 aa4.31□□□□□ -1.72
LRRK2-202ENST00000343742 FCGBPQ9Y6R7 5405 aaPredicted RBP4.27□□□□□ -1.73
LRRK2-202ENST00000343742 MT1EP04732 61 aa4.25□□□□□ -1.73
LRRK2-202ENST00000343742 KRTAP19-6Q3LI70 58 aa4.24□□□□□ -1.73
LRRK2-202ENST00000343742 MT1LQ93083 61 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms