RNA–Protein interactions for RNA: ENST00000343380.5

E2F1-201, Transcript of E2F transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene E2F1, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1-201ENST00000343380 RYR3Q15413 4870 aa10.91□□□□□ -0.66
E2F1-201ENST00000343380 TNXBP22105 4242 aa10.9□□□□□ -0.66
E2F1-201ENST00000343380 MYCBP2O75592 4640 aa10.89□□□□□ -0.67
E2F1-201ENST00000343380 KRTAP3-3Q9BYR6 98 aa10.88□□□□□ -0.67
E2F1-201ENST00000343380 KRTAP10-6P60371 365 aaPredicted RBP10.85□□□□□ -0.67
E2F1-201ENST00000343380 KRTAP13-4Q3LI77 160 aa10.83□□□□□ -0.68
E2F1-201ENST00000343380 KRTAP10-8P60410 259 aa10.8□□□□□ -0.68
E2F1-201ENST00000343380 K7ERS5 55 aa10.79□□□□□ -0.68
E2F1-201ENST00000343380 KRTAP3-2Q9BYR7 98 aa10.77□□□□□ -0.69
E2F1-201ENST00000343380 A0A0D9SG42 100 aa10.74□□□□□ -0.69
E2F1-201ENST00000343380 RPL37P61927 97 aaKnown RBP10.71□□□□□ -0.7
E2F1-201ENST00000343380 ROMO1P60602 79 aa10.69□□□□□ -0.7
E2F1-201ENST00000343380 XP32Q5T750 250 aa10.67□□□□□ -0.7
E2F1-201ENST00000343380 H3BS24 57 aa10.65□□□□□ -0.7
E2F1-201ENST00000343380 P0C880 135 aa10.64□□□□□ -0.71
E2F1-201ENST00000343380 S4R3F8 94 aa10.64□□□□□ -0.71
E2F1-201ENST00000343380 LPAP08519 4548 aa10.58□□□□□ -0.72
E2F1-201ENST00000343380 Q5VSD8 79 aa10.55□□□□□ -0.72
E2F1-201ENST00000343380 TPRXLQ17RH7 258 aa10.54□□□□□ -0.72
E2F1-201ENST00000343380 KRTAP17-1Q9BYP8 105 aa10.52□□□□□ -0.72
E2F1-201ENST00000343380 EPPK1P58107 5090 aaKnown RBP10.52□□□□□ -0.73
E2F1-201ENST00000343380 C10orf95Q9H7T3 257 aa10.47□□□□□ -0.73
E2F1-201ENST00000343380 RYR1P21817 5038 aa10.47□□□□□ -0.73
E2F1-201ENST00000343380 KRTAP12-2P59991 146 aa10.46□□□□□ -0.73
E2F1-201ENST00000343380 LRP2P98164 4655 aa10.43□□□□□ -0.74
E2F1-201ENST00000343380 KIAA1109Q2LD37 5005 aa10.4□□□□□ -0.75
E2F1-201ENST00000343380 MT1HL1P0DM35 61 aa10.35□□□□□ -0.75
E2F1-201ENST00000343380 KRTAP12-1P59990 96 aa10.34□□□□□ -0.75
E2F1-201ENST00000343380 SPINT4Q6UDR6 99 aa10.31□□□□□ -0.76
E2F1-201ENST00000343380 BIRC6Q9NR09 4857 aa10.26□□□□□ -0.77
E2F1-201ENST00000343380 ABCA13Q86UQ4 5058 aa10.16□□□□□ -0.78
E2F1-201ENST00000343380 M0QZ58 72 aa10.12□□□□□ -0.79
E2F1-201ENST00000343380 KRTAP4-5Q9BYR2 181 aa10.09□□□□□ -0.79
E2F1-201ENST00000343380 KRTAP15-1Q3LI76 137 aa10.09□□□□□ -0.79
E2F1-201ENST00000343380 HERC2O95714 4834 aa10.09□□□□□ -0.79
E2F1-201ENST00000343380 NDUFAF8A1L188 74 aa9.94□□□□□ -0.82
E2F1-201ENST00000343380 LORP23490 312 aaPredicted RBP9.9□□□□□ -0.82
E2F1-201ENST00000343380 R4GN34 69 aa9.9□□□□□ -0.82
E2F1-201ENST00000343380 MUC17Q685J3 4493 aa9.88□□□□□ -0.83
E2F1-201ENST00000343380 J3QL48 77 aa9.81□□□□□ -0.84
E2F1-201ENST00000343380 KRTAP4-1Q9BYQ7 146 aa9.79□□□□□ -0.84
E2F1-201ENST00000343380 SEC61BP60468 96 aaKnown RBP9.66□□□□□ -0.86
E2F1-201ENST00000343380 PCLOQ9Y6V0 5065 aa9.63□□□□□ -0.87
E2F1-201ENST00000343380 MUC2Q02817 5179 aa9.6□□□□□ -0.87
E2F1-201ENST00000343380 KRTAP19-2Q3LHN2 52 aa9.6□□□□□ -0.87
E2F1-201ENST00000343380 PLAC4Q8WY50 150 aa9.53□□□□□ -0.88
E2F1-201ENST00000343380 CAMK2N1Q7Z7J9 78 aa9.42□□□□□ -0.9
E2F1-201ENST00000343380 HERC1Q15751 4861 aa9.39□□□□□ -0.91
E2F1-201ENST00000343380 FLGP20930 4061 aaPredicted RBP9.37□□□□□ -0.91
E2F1-201ENST00000343380 PP632Q6XCG6 107 aa9.28□□□□□ -0.92
E2F1-201ENST00000343380 HMCN2Q8NDA2 5059 aa9.25□□□□□ -0.93
E2F1-201ENST00000343380 FAT4Q6V0I7 4981 aa9.12□□□□□ -0.95
E2F1-201ENST00000343380 TNP1P09430 55 aa9.06□□□□□ -0.96
E2F1-201ENST00000343380 LUZP6Q538Z0 58 aa9.05□□□□□ -0.96
E2F1-201ENST00000343380 LCE2CQ5TA81 110 aa8.93□□□□□ -0.98
E2F1-201ENST00000343380 KRTAP23-1A1A580 65 aa8.89□□□□□ -0.99
E2F1-201ENST00000343380 KRTAP19-1Q8IUB9 90 aa8.86□□□□□ -0.99
E2F1-201ENST00000343380 UBR4Q5T4S7 5183 aa8.85□□□□□ -0.99
E2F1-201ENST00000343380 SPRR5A0A1B0GTR4 108 aa8.84□□□□□ -0.99
E2F1-201ENST00000343380 SPRR2GQ9BYE4 73 aa8.83□□□□□ -1
E2F1-201ENST00000343380 RNF213Q63HN8 5207 aa8.76□□□□□ -1.01
E2F1-201ENST00000343380 A0A0A0MQY5 61 aa8.7□□□□□ -1.02
E2F1-201ENST00000343380 M0R2T5 61 aa8.67□□□□□ -1.02
E2F1-201ENST00000343380 LCE3AQ5TA76 89 aa8.67□□□□□ -1.02
E2F1-201ENST00000343380 MT1HP80294 61 aa8.63□□□□□ -1.03
E2F1-201ENST00000343380 MT1FP04733 61 aa8.6□□□□□ -1.03
E2F1-201ENST00000343380 MT2AP02795 61 aa8.56□□□□□ -1.04
E2F1-201ENST00000343380 KRTAP10-10P60014 251 aa8.55□□□□□ -1.04
E2F1-201ENST00000343380 KRTAP9-8Q9BYQ0 159 aa8.49□□□□□ -1.05
E2F1-201ENST00000343380 KRTAP19-8Q3LI54 63 aa8.38□□□□□ -1.07
E2F1-201ENST00000343380 KRTAP8-1Q8IUC2 63 aa8.38□□□□□ -1.07
E2F1-201ENST00000343380 KRTAP10-5P60370 271 aa8.37□□□□□ -1.07
E2F1-201ENST00000343380 MT1BP07438 61 aa8.36□□□□□ -1.07
E2F1-201ENST00000343380 MT1XP80297 61 aa8.35□□□□□ -1.07
E2F1-201ENST00000343380 LCE2AQ5TA79 106 aaPredicted RBP8.22□□□□□ -1.09
E2F1-201ENST00000343380 KRTAP12-3P60328 96 aa8.2□□□□□ -1.1
E2F1-201ENST00000343380 KRTAP10-12P60413 245 aa8.2□□□□□ -1.1
E2F1-201ENST00000343380 KRTAP10-7P60409 375 aaPredicted RBP8.18□□□□□ -1.1
E2F1-201ENST00000343380 KRTAP9-3Q9BYQ3 159 aa8.1□□□□□ -1.11
E2F1-201ENST00000343380 USH2AO75445 5202 aa7.92□□□□□ -1.14
E2F1-201ENST00000343380 KMT2DO14686 5537 aa7.91□□□□□ -1.14
E2F1-201ENST00000343380 PRO2289Q9P1D8 64 aa7.9□□□□□ -1.14
E2F1-201ENST00000343380 KRTAP19-5Q3LI72 72 aa7.84□□□□□ -1.15
E2F1-201ENST00000343380 INE1O15225 51 aa7.82□□□□□ -1.16
E2F1-201ENST00000343380 LCE2BO14633 110 aa7.8□□□□□ -1.16
E2F1-201ENST00000343380 LCE3CQ5T5A8 94 aa7.73□□□□□ -1.17
E2F1-201ENST00000343380 KRTAP4-8A0A0G2JLE6 195 aa7.68□□□□□ -1.18
E2F1-201ENST00000343380 KRTAP4-8Q9BYQ9 185 aa7.68□□□□□ -1.18
E2F1-201ENST00000343380 KRTAP9-6A8MVA2 160 aa7.6□□□□□ -1.19
E2F1-201ENST00000343380 LCE2DQ5TA82 110 aaPredicted RBP7.58□□□□□ -1.2
E2F1-201ENST00000343380 KRTAP4-7Q9BYR0 210 aa7.47□□□□□ -1.21
E2F1-201ENST00000343380 KRTAP19-7Q3SYF9 63 aa7.45□□□□□ -1.22
E2F1-201ENST00000343380 KRTAP9-2Q9BYQ4 174 aa7.32□□□□□ -1.24
E2F1-201ENST00000343380 KRTAP2-3P0C7H8 128 aa7.29□□□□□ -1.24
E2F1-201ENST00000343380 KRTAP2-4Q9BYR9 128 aa7.29□□□□□ -1.24
E2F1-201ENST00000343380 KRTAP2-1Q9BYU5 128 aa7.29□□□□□ -1.24
E2F1-201ENST00000343380 MT1LQ93083 61 aa7.22□□□□□ -1.25
E2F1-201ENST00000343380 FSIP2Q5CZC0 6907 aa7.21□□□□□ -1.25
E2F1-201ENST00000343380 KRTAP19-6Q3LI70 58 aa7.21□□□□□ -1.26
E2F1-201ENST00000343380 SSPOA2VEC9 5147 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms