RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 DYNC1H1Q14204 4646 aaKnown RBP8.15□□□□□ -1.11
RDX-201ENST00000343115 KRTAP10-4P60372 401 aaPredicted RBP8.14□□□□□ -1.11
RDX-201ENST00000343115 KRTAP4-5Q9BYR2 181 aa8.13□□□□□ -1.11
RDX-201ENST00000343115 KRTAP13-4Q3LI77 160 aa8.13□□□□□ -1.11
RDX-201ENST00000343115 DNAH2Q9P225 4427 aa8.13□□□□□ -1.11
RDX-201ENST00000343115 KRTAP12-2P59991 146 aa8.09□□□□□ -1.11
RDX-201ENST00000343115 KRTAP10-6P60371 365 aaPredicted RBP8.09□□□□□ -1.11
RDX-201ENST00000343115 ALMS1Q8TCU4 4167 aa8.09□□□□□ -1.11
RDX-201ENST00000343115 HYDINQ4G0P3 5121 aa8.08□□□□□ -1.12
RDX-201ENST00000343115 DYNC2H1Q8NCM8 4307 aaKnown RBP8.06□□□□□ -1.12
RDX-201ENST00000343115 DNAH6Q9C0G6 4158 aa8.06□□□□□ -1.12
RDX-201ENST00000343115 KIAA1109Q2LD37 5005 aa8.05□□□□□ -1.12
RDX-201ENST00000343115 FRAS1Q86XX4 4008 aa8.03□□□□□ -1.12
RDX-201ENST00000343115 MT1HL1P0DM35 61 aa7.99□□□□□ -1.13
RDX-201ENST00000343115 KRTAP3-3Q9BYR6 98 aa7.98□□□□□ -1.13
RDX-201ENST00000343115 PLAC4Q8WY50 150 aa7.97□□□□□ -1.13
RDX-201ENST00000343115 KRTAP12-1P59990 96 aa7.96□□□□□ -1.13
RDX-201ENST00000343115 RYR1P21817 5038 aa7.96□□□□□ -1.14
RDX-201ENST00000343115 SACSQ9NZJ4 4579 aa7.94□□□□□ -1.14
RDX-201ENST00000343115 RYR3Q15413 4870 aa7.92□□□□□ -1.14
RDX-201ENST00000343115 KMT2CQ8NEZ4 4911 aaKnown RBP7.92□□□□□ -1.14
RDX-201ENST00000343115 VPS13BQ7Z7G8 4022 aa7.92□□□□□ -1.14
RDX-201ENST00000343115 PKHD1P08F94 4074 aa7.92□□□□□ -1.14
RDX-201ENST00000343115 KRTAP3-2Q9BYR7 98 aa7.91□□□□□ -1.14
RDX-201ENST00000343115 MYCBP2O75592 4640 aa7.91□□□□□ -1.14
RDX-201ENST00000343115 HECTD4Q9Y4D8 3996 aa7.89□□□□□ -1.15
RDX-201ENST00000343115 TNP1P09430 55 aa7.84□□□□□ -1.15
RDX-201ENST00000343115 APOBP04114 4563 aaKnown RBP7.83□□□□□ -1.16
RDX-201ENST00000343115 LRP1Q07954 4544 aaKnown RBP7.82□□□□□ -1.16
RDX-201ENST00000343115 FAT2Q9NYQ8 4349 aa7.81□□□□□ -1.16
RDX-201ENST00000343115 RYR2Q92736 4967 aa7.8□□□□□ -1.16
RDX-201ENST00000343115 A0A0A0MQY5 61 aa7.77□□□□□ -1.17
RDX-201ENST00000343115 FAT3Q8TDW7 4589 aa7.75□□□□□ -1.17
RDX-201ENST00000343115 KRTAP17-1Q9BYP8 105 aa7.74□□□□□ -1.17
RDX-201ENST00000343115 PP632Q6XCG6 107 aa7.64□□□□□ -1.19
RDX-201ENST00000343115 KRTAP10-10P60014 251 aa7.63□□□□□ -1.19
RDX-201ENST00000343115 PKD1P98161 4303 aa7.55□□□□□ -1.2
RDX-201ENST00000343115 LORP23490 312 aaPredicted RBP7.53□□□□□ -1.2
RDX-201ENST00000343115 HERC2O95714 4834 aa7.48□□□□□ -1.21
RDX-201ENST00000343115 EPPK1P58107 5090 aaKnown RBP7.47□□□□□ -1.21
RDX-201ENST00000343115 HSPG2P98160 4391 aa7.45□□□□□ -1.22
RDX-201ENST00000343115 LRP2P98164 4655 aa7.4□□□□□ -1.23
RDX-201ENST00000343115 KRTAP4-1Q9BYQ7 146 aa7.36□□□□□ -1.23
RDX-201ENST00000343115 KRTAP15-1Q3LI76 137 aa7.36□□□□□ -1.23
RDX-201ENST00000343115 ABCA13Q86UQ4 5058 aa7.21□□□□□ -1.26
RDX-201ENST00000343115 BIRC6Q9NR09 4857 aa7.2□□□□□ -1.26
RDX-201ENST00000343115 LPAP08519 4548 aa7.2□□□□□ -1.26
RDX-201ENST00000343115 PKHD1L1Q86WI1 4243 aa7.07□□□□□ -1.28
RDX-201ENST00000343115 PRO2289Q9P1D8 64 aa7.07□□□□□ -1.28
RDX-201ENST00000343115 TNXBP22105 4242 aa7□□□□□ -1.29
RDX-201ENST00000343115 HERC1Q15751 4861 aa6.97□□□□□ -1.29
RDX-201ENST00000343115 PCLOQ9Y6V0 5065 aa6.89□□□□□ -1.31
RDX-201ENST00000343115 LCE3AQ5TA76 89 aa6.89□□□□□ -1.31
RDX-201ENST00000343115 MUC2Q02817 5179 aa6.86□□□□□ -1.31
RDX-201ENST00000343115 RNF213Q63HN8 5207 aa6.82□□□□□ -1.32
RDX-201ENST00000343115 KRTAP10-12P60413 245 aa6.8□□□□□ -1.32
RDX-201ENST00000343115 MT1HP80294 61 aa6.8□□□□□ -1.32
RDX-201ENST00000343115 KRTAP12-3P60328 96 aa6.72□□□□□ -1.33
RDX-201ENST00000343115 UBR4Q5T4S7 5183 aa6.71□□□□□ -1.33
RDX-201ENST00000343115 MT2AP02795 61 aa6.71□□□□□ -1.34
RDX-201ENST00000343115 MT1FP04733 61 aa6.68□□□□□ -1.34
RDX-201ENST00000343115 KRTAP23-1A1A580 65 aa6.67□□□□□ -1.34
RDX-201ENST00000343115 SPRR2GQ9BYE4 73 aa6.67□□□□□ -1.34
RDX-201ENST00000343115 FAT4Q6V0I7 4981 aa6.64□□□□□ -1.35
RDX-201ENST00000343115 KRTAP19-1Q8IUB9 90 aa6.59□□□□□ -1.35
RDX-201ENST00000343115 FSIP2Q5CZC0 6907 aa6.53□□□□□ -1.36
RDX-201ENST00000343115 LCE2CQ5TA81 110 aa6.52□□□□□ -1.36
RDX-201ENST00000343115 HMCN2Q8NDA2 5059 aa6.52□□□□□ -1.37
RDX-201ENST00000343115 KRTAP19-2Q3LHN2 52 aa6.5□□□□□ -1.37
RDX-201ENST00000343115 MUC17Q685J3 4493 aa6.47□□□□□ -1.37
RDX-201ENST00000343115 FLGP20930 4061 aaPredicted RBP6.35□□□□□ -1.39
RDX-201ENST00000343115 CRCT1Q9UGL9 99 aa6.35□□□□□ -1.39
RDX-201ENST00000343115 KRTAP9-8Q9BYQ0 159 aa6.33□□□□□ -1.4
RDX-201ENST00000343115 KRTAP8-1Q8IUC2 63 aa6.33□□□□□ -1.4
RDX-201ENST00000343115 KRTAP10-7P60409 375 aaPredicted RBP6.29□□□□□ -1.4
RDX-201ENST00000343115 INE1O15225 51 aa6.26□□□□□ -1.41
RDX-201ENST00000343115 KRTAP19-8Q3LI54 63 aa6.26□□□□□ -1.41
RDX-201ENST00000343115 MT1BP07438 61 aa6.25□□□□□ -1.41
RDX-201ENST00000343115 MT1XP80297 61 aa6.25□□□□□ -1.41
RDX-201ENST00000343115 KRTAP19-5Q3LI72 72 aa6.23□□□□□ -1.41
RDX-201ENST00000343115 KRTAP10-5P60370 271 aa6.22□□□□□ -1.41
RDX-201ENST00000343115 KRTAP9-3Q9BYQ3 159 aa6.1□□□□□ -1.43
RDX-201ENST00000343115 SPRR5A0A1B0GTR4 108 aa6.07□□□□□ -1.44
RDX-201ENST00000343115 KRTAP4-8A0A0G2JLE6 195 aa6.05□□□□□ -1.44
RDX-201ENST00000343115 KRTAP4-8Q9BYQ9 185 aa6.05□□□□□ -1.44
RDX-201ENST00000343115 LCE3CQ5T5A8 94 aa6.04□□□□□ -1.44
RDX-201ENST00000343115 LCE2BO14633 110 aa6□□□□□ -1.45
RDX-201ENST00000343115 USH2AO75445 5202 aa5.94□□□□□ -1.46
RDX-201ENST00000343115 LCE2AQ5TA79 106 aaPredicted RBP5.86□□□□□ -1.47
RDX-201ENST00000343115 KRTAP4-7Q9BYR0 210 aa5.8□□□□□ -1.48
RDX-201ENST00000343115 SPRR2FQ96RM1 72 aa5.75□□□□□ -1.49
RDX-201ENST00000343115 SYNE1Q8NF91 8797 aaKnown RBP5.63□□□□□ -1.51
RDX-201ENST00000343115 OBSCNQ5VST9 7968 aa5.63□□□□□ -1.51
RDX-201ENST00000343115 KMT2DO14686 5537 aa5.62□□□□□ -1.51
RDX-201ENST00000343115 MT1GP13640 62 aa5.6□□□□□ -1.51
RDX-201ENST00000343115 MT1LQ93083 61 aa5.51□□□□□ -1.53
RDX-201ENST00000343115 DSTQ03001 7570 aaKnown RBP5.5□□□□□ -1.53
RDX-201ENST00000343115 MT1EP04732 61 aa5.48□□□□□ -1.53
RDX-201ENST00000343115 KRTAP9-2Q9BYQ4 174 aa5.47□□□□□ -1.53
RDX-201ENST00000343115 KRTAP19-7Q3SYF9 63 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 180 ms