RNA–Protein interactions for RNA: ENST00000342895.7

LRRC39-201, Transcript of leucine rich repeat containing 39, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRC39, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-201ENST00000342895 CHD8Q9HCK8 2581 aa1.19□□□□□ -2.22
LRRC39-201ENST00000342895 CSMD1Q96PZ7 3565 aa1.19□□□□□ -2.22
LRRC39-201ENST00000342895 NBEAL1Q6ZS30 2694 aa1.19□□□□□ -2.22
LRRC39-201ENST00000342895 FBN2P35556 2912 aa1.19□□□□□ -2.22
LRRC39-201ENST00000342895 FRAS1Q86XX4 4008 aa1.18□□□□□ -2.22
LRRC39-201ENST00000342895 USP9XQ93008 2570 aaPredicted RBP1.18□□□□□ -2.22
LRRC39-201ENST00000342895 UNC80Q8N2C7 3258 aa1.18□□□□□ -2.22
LRRC39-201ENST00000342895 TENM4Q6N022 2769 aa1.18□□□□□ -2.22
LRRC39-201ENST00000342895 CACNA1AO00555 2505 aa1.18□□□□□ -2.22
LRRC39-201ENST00000342895 ADGRG4Q8IZF6 3080 aa1.18□□□□□ -2.22
LRRC39-201ENST00000342895 HRNRQ86YZ3 2850 aaPredicted RBP1.17□□□□□ -2.22
LRRC39-201ENST00000342895 PKD1L1Q8TDX9 2849 aa1.17□□□□□ -2.22
LRRC39-201ENST00000342895 DEFB124Q8NES8 71 aa1.17□□□□□ -2.22
LRRC39-201ENST00000342895 TLN1Q9Y490 2541 aaKnown RBP1.16□□□□□ -2.22
LRRC39-201ENST00000342895 ANKRD11Q6UB99 2663 aaPredicted RBP1.16□□□□□ -2.22
LRRC39-201ENST00000342895 BRCA2P51587 3418 aa1.16□□□□□ -2.22
LRRC39-201ENST00000342895 TGP01266 2768 aa1.16□□□□□ -2.22
LRRC39-201ENST00000342895 SPTAN1Q13813 2472 aaKnown RBP1.16□□□□□ -2.22
LRRC39-201ENST00000342895 KRTAP4-1Q9BYQ7 146 aa1.16□□□□□ -2.22
LRRC39-201ENST00000342895 DNAH3Q8TD57 4116 aa1.15□□□□□ -2.23
LRRC39-201ENST00000342895 SACSQ9NZJ4 4579 aa1.15□□□□□ -2.23
LRRC39-201ENST00000342895 ACANP16112 2415 aa1.15□□□□□ -2.23
LRRC39-201ENST00000342895 VCANP13611 3396 aa1.14□□□□□ -2.23
LRRC39-201ENST00000342895 ANK2Q01484 3957 aa1.14□□□□□ -2.23
LRRC39-201ENST00000342895 KMT2AQ03164 3969 aa1.14□□□□□ -2.23
LRRC39-201ENST00000342895 DEFB133Q30KQ1 61 aa1.14□□□□□ -2.23
LRRC39-201ENST00000342895 LINC01556Q5JQF7 62 aa1.14□□□□□ -2.23
LRRC39-201ENST00000342895 CENPEQ02224 2701 aa1.14□□□□□ -2.23
LRRC39-201ENST00000342895 DYNC2H1Q8NCM8 4307 aaKnown RBP1.13□□□□□ -2.23
LRRC39-201ENST00000342895 WDFY3Q8IZQ1 3526 aa1.13□□□□□ -2.23
LRRC39-201ENST00000342895 H3BNG1 76 aa1.13□□□□□ -2.23
LRRC39-201ENST00000342895 CSMD2Q7Z408 3487 aa1.13□□□□□ -2.23
LRRC39-201ENST00000342895 VPS13BQ7Z7G8 4022 aa1.13□□□□□ -2.23
LRRC39-201ENST00000342895 NSD1Q96L73 2696 aaPredicted RBP1.12□□□□□ -2.23
LRRC39-201ENST00000342895 FBN3Q75N90 2809 aa1.12□□□□□ -2.23
LRRC39-201ENST00000342895 MTORP42345 2549 aa1.12□□□□□ -2.23
LRRC39-201ENST00000342895 ZFYVE26Q68DK2 2539 aa1.12□□□□□ -2.23
LRRC39-201ENST00000342895 TRRAPQ9Y4A5 3859 aa1.12□□□□□ -2.23
LRRC39-201ENST00000342895 TEP1Q99973 2627 aaKnown RBP1.11□□□□□ -2.23
LRRC39-201ENST00000342895 SPART-AS1P0CW21 52 aa1.11□□□□□ -2.23
LRRC39-201ENST00000342895 PKHD1L1Q86WI1 4243 aa1.11□□□□□ -2.23
LRRC39-201ENST00000342895 MYO18BQ8IUG5 2567 aa1.11□□□□□ -2.23
LRRC39-201ENST00000342895 DOPEY1Q5JWR5 2465 aa1.11□□□□□ -2.23
LRRC39-201ENST00000342895 DNAH14Q0VDD8 3507 aa1.1□□□□□ -2.23
LRRC39-201ENST00000342895 TENM3Q9P273 2699 aa1.1□□□□□ -2.23
LRRC39-201ENST00000342895 TNP1P09430 55 aa1.1□□□□□ -2.23
LRRC39-201ENST00000342895 MUC5ACP98088 5654 aa1.1□□□□□ -2.23
LRRC39-201ENST00000342895 STAB1Q9NY15 2570 aa1.1□□□□□ -2.23
LRRC39-201ENST00000342895 MYO15AQ9UKN7 3530 aa1.1□□□□□ -2.23
LRRC39-201ENST00000342895 DNAH2Q9P225 4427 aa1.1□□□□□ -2.23
LRRC39-201ENST00000342895 DNAH10Q8IVF4 4471 aa1.09□□□□□ -2.23
LRRC39-201ENST00000342895 ACACBO00763 2458 aa1.09□□□□□ -2.23
LRRC39-201ENST00000342895 PRKDCP78527 4128 aaKnown RBP1.09□□□□□ -2.23
LRRC39-201ENST00000342895 ZNF469Q96JG9 3925 aaPredicted RBP1.09□□□□□ -2.24
LRRC39-201ENST00000342895 TLN2Q9Y4G6 2542 aa1.09□□□□□ -2.24
LRRC39-201ENST00000342895 DNAH9Q9NYC9 4486 aa1.08□□□□□ -2.24
LRRC39-201ENST00000342895 KRTAP2-3P0C7H8 128 aa1.08□□□□□ -2.24
LRRC39-201ENST00000342895 KRTAP2-4Q9BYR9 128 aa1.08□□□□□ -2.24
LRRC39-201ENST00000342895 KRTAP2-1Q9BYU5 128 aa1.08□□□□□ -2.24
LRRC39-201ENST00000342895 SVEP1Q4LDE5 3571 aa1.08□□□□□ -2.24
LRRC39-201ENST00000342895 DEFB135Q30KP9 77 aa1.07□□□□□ -2.24
LRRC39-201ENST00000342895 UNC79Q9P2D8 2635 aa1.07□□□□□ -2.24
LRRC39-201ENST00000342895 KRTAP10-4P60372 401 aaPredicted RBP1.07□□□□□ -2.24
LRRC39-201ENST00000342895 U3KQA8 63 aa1.07□□□□□ -2.24
LRRC39-201ENST00000342895 FLNAP21333 2647 aaKnown RBP1.07□□□□□ -2.24
LRRC39-201ENST00000342895 CEP295Q9C0D2 2601 aa1.07□□□□□ -2.24
LRRC39-201ENST00000342895 DNAH7Q8WXX0 4024 aa1.07□□□□□ -2.24
LRRC39-201ENST00000342895 DNAH1Q9P2D7 4330 aa1.06□□□□□ -2.24
LRRC39-201ENST00000342895 FLGP20930 4061 aaPredicted RBP1.06□□□□□ -2.24
LRRC39-201ENST00000342895 FLNBO75369 2602 aaKnown RBP1.06□□□□□ -2.24
LRRC39-201ENST00000342895 J3QKU1 62 aa1.06□□□□□ -2.24
LRRC39-201ENST00000342895 CMYA5Q8N3K9 4069 aa1.06□□□□□ -2.24
LRRC39-201ENST00000342895 CUBNO60494 3623 aa1.06□□□□□ -2.24
LRRC39-201ENST00000342895 DNAH17Q9UFH2 4485 aa1.05□□□□□ -2.24
LRRC39-201ENST00000342895 PKD1P98161 4303 aa1.05□□□□□ -2.24
LRRC39-201ENST00000342895 FAT3Q8TDW7 4589 aa1.05□□□□□ -2.24
LRRC39-201ENST00000342895 FAT2Q9NYQ8 4349 aa1.05□□□□□ -2.24
LRRC39-201ENST00000342895 STAB2Q8WWQ8 2551 aa1.05□□□□□ -2.24
LRRC39-201ENST00000342895 APOBP04114 4563 aaKnown RBP1.05□□□□□ -2.24
LRRC39-201ENST00000342895 FASNP49327 2511 aaKnown RBP1.04□□□□□ -2.24
LRRC39-201ENST00000342895 SYNE2Q8WXH0 6885 aaKnown RBP1.04□□□□□ -2.24
LRRC39-201ENST00000342895 NOTCH1P46531 2555 aa1.04□□□□□ -2.24
LRRC39-201ENST00000342895 VPS13CQ709C8 3753 aa1.04□□□□□ -2.24
LRRC39-201ENST00000342895 DNAH6Q9C0G6 4158 aa1.04□□□□□ -2.24
LRRC39-201ENST00000342895 EYSQ5T1H1 3165 aa1.04□□□□□ -2.24
LRRC39-201ENST00000342895 ANK3Q12955 4377 aaKnown RBP1.04□□□□□ -2.24
LRRC39-201ENST00000342895 HECTD4Q9Y4D8 3996 aa1.03□□□□□ -2.24
LRRC39-201ENST00000342895 CDH23Q9H251 3354 aa1.03□□□□□ -2.24
LRRC39-201ENST00000342895 HSPG2P98160 4391 aa1.03□□□□□ -2.24
LRRC39-201ENST00000342895 HUWE1Q7Z6Z7 4374 aaKnown RBP1.03□□□□□ -2.24
LRRC39-201ENST00000342895 HTN3P15516 51 aa1.03□□□□□ -2.25
LRRC39-201ENST00000342895 MGAM2Q2M2H8 2515 aa1.03□□□□□ -2.25
LRRC39-201ENST00000342895 TNXBP22105 4242 aa1.02□□□□□ -2.25
LRRC39-201ENST00000342895 C9orf92A6NGG3 77 aa1.02□□□□□ -2.25
LRRC39-201ENST00000342895 FCGBPQ9Y6R7 5405 aaPredicted RBP1.01□□□□□ -2.25
LRRC39-201ENST00000342895 M0R2T5 61 aa1.01□□□□□ -2.25
LRRC39-201ENST00000342895 SMR3AQ99954 134 aa1.01□□□□□ -2.25
LRRC39-201ENST00000342895 DEFB4AO15263 64 aa1.01□□□□□ -2.25
LRRC39-201ENST00000342895 RPS29P62273 56 aaKnown RBP1.01□□□□□ -2.25
LRRC39-201ENST00000342895 NEBP20929 6669 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms