RNA–Protein interactions for RNA: ENST00000342216.8

PKN1-202, Transcript of protein kinase N1, humanhuman

TSL 2 BASIC

Gene PKN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-202ENST00000342216 KRTAP10-1P60331 282 aa7.77□□□□□ -1.17
PKN1-202ENST00000342216 SACSQ9NZJ4 4579 aa7.75□□□□□ -1.17
PKN1-202ENST00000342216 KRTAP3-2Q9BYR7 98 aa7.74□□□□□ -1.17
PKN1-202ENST00000342216 KRTAP3-3Q9BYR6 98 aa7.71□□□□□ -1.18
PKN1-202ENST00000342216 LUZP6Q538Z0 58 aa7.7□□□□□ -1.18
PKN1-202ENST00000342216 SMR3BP02814 79 aaPredicted RBP7.67□□□□□ -1.18
PKN1-202ENST00000342216 KRTAP21-3Q3LHN1 58 aa7.65□□□□□ -1.18
PKN1-202ENST00000342216 KMT2CQ8NEZ4 4911 aaKnown RBP7.62□□□□□ -1.19
PKN1-202ENST00000342216 KRTAP12-1P59990 96 aa7.6□□□□□ -1.19
PKN1-202ENST00000342216 FAT1Q14517 4588 aa7.59□□□□□ -1.19
PKN1-202ENST00000342216 DYNC1H1Q14204 4646 aaKnown RBP7.57□□□□□ -1.2
PKN1-202ENST00000342216 XP32Q5T750 250 aa7.57□□□□□ -1.2
PKN1-202ENST00000342216 RPS29P62273 56 aaKnown RBP7.52□□□□□ -1.21
PKN1-202ENST00000342216 KRTAP10-8P60410 259 aa7.51□□□□□ -1.21
PKN1-202ENST00000342216 MYCBP2O75592 4640 aa7.48□□□□□ -1.21
PKN1-202ENST00000342216 RYR2Q92736 4967 aa7.48□□□□□ -1.21
PKN1-202ENST00000342216 APOBP04114 4563 aaKnown RBP7.44□□□□□ -1.22
PKN1-202ENST00000342216 PLAC4Q8WY50 150 aa7.44□□□□□ -1.22
PKN1-202ENST00000342216 RYR3Q15413 4870 aa7.38□□□□□ -1.23
PKN1-202ENST00000342216 HSPG2P98160 4391 aa7.36□□□□□ -1.23
PKN1-202ENST00000342216 A0A1B0GVY2 172 aa7.33□□□□□ -1.24
PKN1-202ENST00000342216 PKHD1L1Q86WI1 4243 aa7.33□□□□□ -1.24
PKN1-202ENST00000342216 LRP1Q07954 4544 aaKnown RBP7.3□□□□□ -1.24
PKN1-202ENST00000342216 M0QZ58 72 aa7.22□□□□□ -1.25
PKN1-202ENST00000342216 KRTAP10-4P60372 401 aaPredicted RBP7.2□□□□□ -1.26
PKN1-202ENST00000342216 LPAP08519 4548 aa7.19□□□□□ -1.26
PKN1-202ENST00000342216 KIAA1109Q2LD37 5005 aa7.18□□□□□ -1.26
PKN1-202ENST00000342216 FAT3Q8TDW7 4589 aa7.17□□□□□ -1.26
PKN1-202ENST00000342216 EPPK1P58107 5090 aaKnown RBP7.13□□□□□ -1.27
PKN1-202ENST00000342216 KRTAP17-1Q9BYP8 105 aa7.1□□□□□ -1.27
PKN1-202ENST00000342216 RYR1P21817 5038 aa7.1□□□□□ -1.27
PKN1-202ENST00000342216 R4GN34 69 aa7.09□□□□□ -1.27
PKN1-202ENST00000342216 TNXBP22105 4242 aa7.09□□□□□ -1.27
PKN1-202ENST00000342216 Q5VSD8 79 aa7.02□□□□□ -1.29
PKN1-202ENST00000342216 LORP23490 312 aaPredicted RBP6.99□□□□□ -1.29
PKN1-202ENST00000342216 LRP2P98164 4655 aa6.99□□□□□ -1.29
PKN1-202ENST00000342216 SEC61BP60468 96 aaKnown RBP6.91□□□□□ -1.3
PKN1-202ENST00000342216 ABCA13Q86UQ4 5058 aa6.87□□□□□ -1.31
PKN1-202ENST00000342216 CAMK2N1Q7Z7J9 78 aa6.86□□□□□ -1.31
PKN1-202ENST00000342216 PP632Q6XCG6 107 aa6.85□□□□□ -1.31
PKN1-202ENST00000342216 KRTAP4-5Q9BYR2 181 aa6.8□□□□□ -1.32
PKN1-202ENST00000342216 MT1HL1P0DM35 61 aa6.78□□□□□ -1.32
PKN1-202ENST00000342216 HERC2O95714 4834 aa6.67□□□□□ -1.34
PKN1-202ENST00000342216 SPRR5A0A1B0GTR4 108 aa6.66□□□□□ -1.34
PKN1-202ENST00000342216 PRO2289Q9P1D8 64 aa6.62□□□□□ -1.35
PKN1-202ENST00000342216 TNP1P09430 55 aa6.57□□□□□ -1.36
PKN1-202ENST00000342216 MUC2Q02817 5179 aa6.56□□□□□ -1.36
PKN1-202ENST00000342216 HERC1Q15751 4861 aa6.49□□□□□ -1.37
PKN1-202ENST00000342216 BIRC6Q9NR09 4857 aa6.48□□□□□ -1.37
PKN1-202ENST00000342216 PCLOQ9Y6V0 5065 aa6.44□□□□□ -1.38
PKN1-202ENST00000342216 J3QL48 77 aa6.44□□□□□ -1.38
PKN1-202ENST00000342216 MUC17Q685J3 4493 aa6.4□□□□□ -1.38
PKN1-202ENST00000342216 KRTAP4-1Q9BYQ7 146 aa6.39□□□□□ -1.39
PKN1-202ENST00000342216 INE1O15225 51 aa6.33□□□□□ -1.4
PKN1-202ENST00000342216 KRTAP23-1A1A580 65 aa6.32□□□□□ -1.4
PKN1-202ENST00000342216 LCE3AQ5TA76 89 aa6.24□□□□□ -1.41
PKN1-202ENST00000342216 HMCN2Q8NDA2 5059 aa6.23□□□□□ -1.41
PKN1-202ENST00000342216 FAT4Q6V0I7 4981 aa6.2□□□□□ -1.42
PKN1-202ENST00000342216 KRTAP19-2Q3LHN2 52 aa6.2□□□□□ -1.42
PKN1-202ENST00000342216 RNF213Q63HN8 5207 aa6.18□□□□□ -1.42
PKN1-202ENST00000342216 UBR4Q5T4S7 5183 aa6.12□□□□□ -1.43
PKN1-202ENST00000342216 FLGP20930 4061 aaPredicted RBP6.09□□□□□ -1.43
PKN1-202ENST00000342216 KRTAP8-1Q8IUC2 63 aa5.9□□□□□ -1.46
PKN1-202ENST00000342216 KRTAP19-1Q8IUB9 90 aa5.89□□□□□ -1.47
PKN1-202ENST00000342216 M0R2T5 61 aa5.87□□□□□ -1.47
PKN1-202ENST00000342216 KRTAP10-12P60413 245 aa5.85□□□□□ -1.47
PKN1-202ENST00000342216 KRTAP12-3P60328 96 aa5.85□□□□□ -1.47
PKN1-202ENST00000342216 LCE2CQ5TA81 110 aa5.85□□□□□ -1.47
PKN1-202ENST00000342216 SPRR2GQ9BYE4 73 aa5.84□□□□□ -1.48
PKN1-202ENST00000342216 KRTAP10-10P60014 251 aa5.73□□□□□ -1.49
PKN1-202ENST00000342216 MT1HP80294 61 aa5.7□□□□□ -1.5
PKN1-202ENST00000342216 KRTAP10-5P60370 271 aa5.64□□□□□ -1.51
PKN1-202ENST00000342216 KMT2DO14686 5537 aa5.62□□□□□ -1.51
PKN1-202ENST00000342216 KRTAP10-7P60409 375 aaPredicted RBP5.61□□□□□ -1.51
PKN1-202ENST00000342216 MT1XP80297 61 aa5.61□□□□□ -1.51
PKN1-202ENST00000342216 MT1FP04733 61 aa5.59□□□□□ -1.51
PKN1-202ENST00000342216 MT2AP02795 61 aa5.55□□□□□ -1.52
PKN1-202ENST00000342216 KRTAP9-8Q9BYQ0 159 aa5.53□□□□□ -1.52
PKN1-202ENST00000342216 LCE3CQ5T5A8 94 aa5.51□□□□□ -1.53
PKN1-202ENST00000342216 USH2AO75445 5202 aa5.5□□□□□ -1.53
PKN1-202ENST00000342216 KRTAP9-6A8MVA2 160 aa5.5□□□□□ -1.53
PKN1-202ENST00000342216 MT1BP07438 61 aa5.49□□□□□ -1.53
PKN1-202ENST00000342216 KRTAP19-5Q3LI72 72 aa5.45□□□□□ -1.54
PKN1-202ENST00000342216 KRTAP19-8Q3LI54 63 aa5.43□□□□□ -1.54
PKN1-202ENST00000342216 KRTAP2-3P0C7H8 128 aa5.34□□□□□ -1.55
PKN1-202ENST00000342216 KRTAP2-4Q9BYR9 128 aa5.34□□□□□ -1.55
PKN1-202ENST00000342216 KRTAP2-1Q9BYU5 128 aa5.34□□□□□ -1.55
PKN1-202ENST00000342216 KRTAP4-7Q9BYR0 210 aa5.33□□□□□ -1.56
PKN1-202ENST00000342216 KRTAP9-3Q9BYQ3 159 aa5.3□□□□□ -1.56
PKN1-202ENST00000342216 KRTAP4-8A0A0G2JLE6 195 aa5.22□□□□□ -1.57
PKN1-202ENST00000342216 KRTAP4-8Q9BYQ9 185 aa5.22□□□□□ -1.57
PKN1-202ENST00000342216 LCE2AQ5TA79 106 aaPredicted RBP5.22□□□□□ -1.57
PKN1-202ENST00000342216 FSIP2Q5CZC0 6907 aa5.2□□□□□ -1.58
PKN1-202ENST00000342216 LCE2BO14633 110 aa5.18□□□□□ -1.58
PKN1-202ENST00000342216 KRTAP12-4P60329 112 aa5.03□□□□□ -1.6
PKN1-202ENST00000342216 KRTAP19-7Q3SYF9 63 aa4.99□□□□□ -1.61
PKN1-202ENST00000342216 DSTQ03001 7570 aaKnown RBP4.99□□□□□ -1.61
PKN1-202ENST00000342216 SSPOA2VEC9 5147 aa4.98□□□□□ -1.61
PKN1-202ENST00000342216 LOC100996750A0A140TA64 210 aa4.93□□□□□ -1.62
PKN1-202ENST00000342216 FCGBPQ9Y6R7 5405 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms