RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 FRAS1Q86XX4 4008 aa6.79□□□□□ -1.32
TMEM248-201ENST00000341567 DNAH8Q96JB1 4490 aa6.76□□□□□ -1.33
TMEM248-201ENST00000341567 DNAH17Q9UFH2 4485 aa6.76□□□□□ -1.33
TMEM248-201ENST00000341567 DNAH6Q9C0G6 4158 aa6.76□□□□□ -1.33
TMEM248-201ENST00000341567 KRTAP4-5Q9BYR2 181 aa6.75□□□□□ -1.33
TMEM248-201ENST00000341567 PLAC4Q8WY50 150 aa6.74□□□□□ -1.33
TMEM248-201ENST00000341567 LRP1BQ9NZR2 4599 aa6.74□□□□□ -1.33
TMEM248-201ENST00000341567 KRTAP12-2P59991 146 aa6.74□□□□□ -1.33
TMEM248-201ENST00000341567 DNAH2Q9P225 4427 aa6.73□□□□□ -1.33
TMEM248-201ENST00000341567 KRTAP13-4Q3LI77 160 aa6.71□□□□□ -1.34
TMEM248-201ENST00000341567 MYCBP2O75592 4640 aa6.7□□□□□ -1.34
TMEM248-201ENST00000341567 KRTAP10-4P60372 401 aaPredicted RBP6.69□□□□□ -1.34
TMEM248-201ENST00000341567 HYDINQ4G0P3 5121 aa6.69□□□□□ -1.34
TMEM248-201ENST00000341567 SACSQ9NZJ4 4579 aa6.67□□□□□ -1.34
TMEM248-201ENST00000341567 MT1HL1P0DM35 61 aa6.67□□□□□ -1.34
TMEM248-201ENST00000341567 HECTD4Q9Y4D8 3996 aa6.65□□□□□ -1.34
TMEM248-201ENST00000341567 DYNC1H1Q14204 4646 aaKnown RBP6.65□□□□□ -1.34
TMEM248-201ENST00000341567 KRTAP10-6P60371 365 aaPredicted RBP6.63□□□□□ -1.35
TMEM248-201ENST00000341567 RYR1P21817 5038 aa6.62□□□□□ -1.35
TMEM248-201ENST00000341567 KIAA1109Q2LD37 5005 aa6.62□□□□□ -1.35
TMEM248-201ENST00000341567 KRTAP12-1P59990 96 aa6.61□□□□□ -1.35
TMEM248-201ENST00000341567 TNP1P09430 55 aa6.6□□□□□ -1.35
TMEM248-201ENST00000341567 RYR2Q92736 4967 aa6.59□□□□□ -1.35
TMEM248-201ENST00000341567 KMT2CQ8NEZ4 4911 aaKnown RBP6.57□□□□□ -1.36
TMEM248-201ENST00000341567 FAT2Q9NYQ8 4349 aa6.57□□□□□ -1.36
TMEM248-201ENST00000341567 KRTAP10-10P60014 251 aa6.55□□□□□ -1.36
TMEM248-201ENST00000341567 FAT3Q8TDW7 4589 aa6.54□□□□□ -1.36
TMEM248-201ENST00000341567 VPS13BQ7Z7G8 4022 aa6.53□□□□□ -1.36
TMEM248-201ENST00000341567 PKD1P98161 4303 aa6.52□□□□□ -1.37
TMEM248-201ENST00000341567 PKHD1P08F94 4074 aa6.5□□□□□ -1.37
TMEM248-201ENST00000341567 LRP1Q07954 4544 aaKnown RBP6.46□□□□□ -1.37
TMEM248-201ENST00000341567 PP632Q6XCG6 107 aa6.46□□□□□ -1.38
TMEM248-201ENST00000341567 KRTAP3-3Q9BYR6 98 aa6.45□□□□□ -1.38
TMEM248-201ENST00000341567 RYR3Q15413 4870 aa6.45□□□□□ -1.38
TMEM248-201ENST00000341567 KRTAP3-2Q9BYR7 98 aa6.45□□□□□ -1.38
TMEM248-201ENST00000341567 APOBP04114 4563 aaKnown RBP6.38□□□□□ -1.39
TMEM248-201ENST00000341567 KRTAP15-1Q3LI76 137 aa6.3□□□□□ -1.4
TMEM248-201ENST00000341567 KRTAP17-1Q9BYP8 105 aa6.26□□□□□ -1.41
TMEM248-201ENST00000341567 HSPG2P98160 4391 aa6.23□□□□□ -1.41
TMEM248-201ENST00000341567 EPPK1P58107 5090 aaKnown RBP6.19□□□□□ -1.42
TMEM248-201ENST00000341567 LRP2P98164 4655 aa6.18□□□□□ -1.42
TMEM248-201ENST00000341567 LORP23490 312 aaPredicted RBP6.18□□□□□ -1.42
TMEM248-201ENST00000341567 KRTAP4-1Q9BYQ7 146 aa6.13□□□□□ -1.43
TMEM248-201ENST00000341567 HERC2O95714 4834 aa6.09□□□□□ -1.43
TMEM248-201ENST00000341567 BIRC6Q9NR09 4857 aa6.06□□□□□ -1.44
TMEM248-201ENST00000341567 PKHD1L1Q86WI1 4243 aa5.99□□□□□ -1.45
TMEM248-201ENST00000341567 PRO2289Q9P1D8 64 aa5.99□□□□□ -1.45
TMEM248-201ENST00000341567 TNXBP22105 4242 aa5.94□□□□□ -1.46
TMEM248-201ENST00000341567 LPAP08519 4548 aa5.91□□□□□ -1.46
TMEM248-201ENST00000341567 ABCA13Q86UQ4 5058 aa5.9□□□□□ -1.47
TMEM248-201ENST00000341567 PCLOQ9Y6V0 5065 aa5.86□□□□□ -1.47
TMEM248-201ENST00000341567 MT1HP80294 61 aa5.69□□□□□ -1.5
TMEM248-201ENST00000341567 LCE3AQ5TA76 89 aa5.68□□□□□ -1.5
TMEM248-201ENST00000341567 MUC2Q02817 5179 aa5.68□□□□□ -1.5
TMEM248-201ENST00000341567 KRTAP10-12P60413 245 aa5.65□□□□□ -1.51
TMEM248-201ENST00000341567 RNF213Q63HN8 5207 aa5.63□□□□□ -1.51
TMEM248-201ENST00000341567 HERC1Q15751 4861 aa5.63□□□□□ -1.51
TMEM248-201ENST00000341567 MT2AP02795 61 aa5.61□□□□□ -1.51
TMEM248-201ENST00000341567 FSIP2Q5CZC0 6907 aa5.6□□□□□ -1.51
TMEM248-201ENST00000341567 MT1FP04733 61 aa5.59□□□□□ -1.51
TMEM248-201ENST00000341567 KRTAP12-3P60328 96 aa5.57□□□□□ -1.52
TMEM248-201ENST00000341567 CRCT1Q9UGL9 99 aa5.51□□□□□ -1.53
TMEM248-201ENST00000341567 FAT4Q6V0I7 4981 aa5.51□□□□□ -1.53
TMEM248-201ENST00000341567 OBSCNQ5VST9 7968 aa5.49□□□□□ -1.53
TMEM248-201ENST00000341567 INE1O15225 51 aa5.48□□□□□ -1.53
TMEM248-201ENST00000341567 KRTAP23-1A1A580 65 aa5.48□□□□□ -1.53
TMEM248-201ENST00000341567 HMCN2Q8NDA2 5059 aa5.47□□□□□ -1.53
TMEM248-201ENST00000341567 UBR4Q5T4S7 5183 aa5.47□□□□□ -1.53
TMEM248-201ENST00000341567 SPRR2GQ9BYE4 73 aa5.44□□□□□ -1.54
TMEM248-201ENST00000341567 KRTAP19-1Q8IUB9 90 aa5.4□□□□□ -1.55
TMEM248-201ENST00000341567 KRTAP19-2Q3LHN2 52 aa5.34□□□□□ -1.55
TMEM248-201ENST00000341567 LCE2CQ5TA81 110 aa5.34□□□□□ -1.55
TMEM248-201ENST00000341567 MUC17Q685J3 4493 aa5.33□□□□□ -1.56
TMEM248-201ENST00000341567 SYNE1Q8NF91 8797 aaKnown RBP5.29□□□□□ -1.56
TMEM248-201ENST00000341567 KRTAP9-8Q9BYQ0 159 aa5.25□□□□□ -1.57
TMEM248-201ENST00000341567 KRTAP10-7P60409 375 aaPredicted RBP5.21□□□□□ -1.58
TMEM248-201ENST00000341567 KRTAP8-1Q8IUC2 63 aa5.21□□□□□ -1.58
TMEM248-201ENST00000341567 FLGP20930 4061 aaPredicted RBP5.2□□□□□ -1.58
TMEM248-201ENST00000341567 KRTAP19-5Q3LI72 72 aa5.15□□□□□ -1.58
TMEM248-201ENST00000341567 MT1BP07438 61 aa5.15□□□□□ -1.59
TMEM248-201ENST00000341567 MT1XP80297 61 aa5.12□□□□□ -1.59
TMEM248-201ENST00000341567 KRTAP4-8A0A0G2JLE6 195 aa5.09□□□□□ -1.59
TMEM248-201ENST00000341567 KRTAP19-8Q3LI54 63 aa5.09□□□□□ -1.59
TMEM248-201ENST00000341567 KRTAP4-8Q9BYQ9 185 aa5.09□□□□□ -1.59
TMEM248-201ENST00000341567 KRTAP10-5P60370 271 aa5.08□□□□□ -1.6
TMEM248-201ENST00000341567 KRTAP9-3Q9BYQ3 159 aa5.05□□□□□ -1.6
TMEM248-201ENST00000341567 SPRR5A0A1B0GTR4 108 aa5.02□□□□□ -1.61
TMEM248-201ENST00000341567 LCE2DQ5TA82 110 aaPredicted RBP5□□□□□ -1.61
TMEM248-201ENST00000341567 SPRR2FQ96RM1 72 aa4.98□□□□□ -1.61
TMEM248-201ENST00000341567 USH2AO75445 5202 aa4.98□□□□□ -1.61
TMEM248-201ENST00000341567 LCE2BO14633 110 aa4.97□□□□□ -1.61
TMEM248-201ENST00000341567 LCE3CQ5T5A8 94 aa4.96□□□□□ -1.62
TMEM248-201ENST00000341567 LCE2AQ5TA79 106 aaPredicted RBP4.96□□□□□ -1.62
TMEM248-201ENST00000341567 DSTQ03001 7570 aaKnown RBP4.85□□□□□ -1.63
TMEM248-201ENST00000341567 KRTAP4-7Q9BYR0 210 aa4.82□□□□□ -1.64
TMEM248-201ENST00000341567 KMT2DO14686 5537 aa4.78□□□□□ -1.64
TMEM248-201ENST00000341567 FCGBPQ9Y6R7 5405 aaPredicted RBP4.76□□□□□ -1.65
TMEM248-201ENST00000341567 MT1GP13640 62 aa4.7□□□□□ -1.66
TMEM248-201ENST00000341567 KRTAP12-4P60329 112 aa4.57□□□□□ -1.68
TMEM248-201ENST00000341567 SYNE2Q8WXH0 6885 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms