RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 EPPK1P58107 5090 aaKnown RBP10.69□□□□□ -0.7
SPG7-202ENST00000341316 H0YAA0 97 aa10.56□□□□□ -0.72
SPG7-202ENST00000341316 MT1HL1P0DM35 61 aa10.52□□□□□ -0.73
SPG7-202ENST00000341316 LINC01554Q52M75 96 aa10.51□□□□□ -0.73
SPG7-202ENST00000341316 CSAG1Q6PB30 78 aa10.51□□□□□ -0.73
SPG7-202ENST00000341316 RPL37P61927 97 aaKnown RBP10.49□□□□□ -0.73
SPG7-202ENST00000341316 XP32Q5T750 250 aa10.49□□□□□ -0.73
SPG7-202ENST00000341316 COX6B2Q6YFQ2 88 aa10.49□□□□□ -0.73
SPG7-202ENST00000341316 A0A1B0GU33 70 aa10.49□□□□□ -0.73
SPG7-202ENST00000341316 H1FX-AS1Q4G0G2 97 aa10.45□□□□□ -0.74
SPG7-202ENST00000341316 LPAP08519 4548 aa10.36□□□□□ -0.75
SPG7-202ENST00000341316 ABCA13Q86UQ4 5058 aa10.34□□□□□ -0.75
SPG7-202ENST00000341316 LRP2P98164 4655 aa10.33□□□□□ -0.76
SPG7-202ENST00000341316 KRTAP4-5Q9BYR2 181 aa10.31□□□□□ -0.76
SPG7-202ENST00000341316 KRTAP3-3Q9BYR6 98 aa10.27□□□□□ -0.77
SPG7-202ENST00000341316 KRTAP25-1Q3LHN0 102 aa10.19□□□□□ -0.78
SPG7-202ENST00000341316 K7ERS5 55 aa10.16□□□□□ -0.78
SPG7-202ENST00000341316 TPRXLQ17RH7 258 aa10.16□□□□□ -0.78
SPG7-202ENST00000341316 S4R3F8 94 aa10.13□□□□□ -0.79
SPG7-202ENST00000341316 KRTAP10-6P60371 365 aaPredicted RBP10.13□□□□□ -0.79
SPG7-202ENST00000341316 KRTAP13-4Q3LI77 160 aa10.07□□□□□ -0.8
SPG7-202ENST00000341316 CRIPTQ9P021 101 aa10.06□□□□□ -0.8
SPG7-202ENST00000341316 KRTAP3-2Q9BYR7 98 aa10.05□□□□□ -0.8
SPG7-202ENST00000341316 HERC2O95714 4834 aa10.05□□□□□ -0.8
SPG7-202ENST00000341316 A0A0D9SG42 100 aa10□□□□□ -0.81
SPG7-202ENST00000341316 ROMO1P60602 79 aa9.98□□□□□ -0.81
SPG7-202ENST00000341316 P0C880 135 aa9.93□□□□□ -0.82
SPG7-202ENST00000341316 BIRC6Q9NR09 4857 aa9.85□□□□□ -0.83
SPG7-202ENST00000341316 MUC17Q685J3 4493 aa9.84□□□□□ -0.83
SPG7-202ENST00000341316 J3QL48 77 aa9.8□□□□□ -0.84
SPG7-202ENST00000341316 SEC61BP60468 96 aaKnown RBP9.75□□□□□ -0.85
SPG7-202ENST00000341316 KRTAP4-1Q9BYQ7 146 aa9.75□□□□□ -0.85
SPG7-202ENST00000341316 KRTAP12-2P59991 146 aa9.75□□□□□ -0.85
SPG7-202ENST00000341316 H3BS24 57 aa9.73□□□□□ -0.85
SPG7-202ENST00000341316 C10orf95Q9H7T3 257 aa9.68□□□□□ -0.86
SPG7-202ENST00000341316 MUC2Q02817 5179 aa9.66□□□□□ -0.86
SPG7-202ENST00000341316 KRTAP12-1P59990 96 aa9.65□□□□□ -0.86
SPG7-202ENST00000341316 SPINT4Q6UDR6 99 aa9.65□□□□□ -0.87
SPG7-202ENST00000341316 HERC1Q15751 4861 aa9.63□□□□□ -0.87
SPG7-202ENST00000341316 PCLOQ9Y6V0 5065 aa9.62□□□□□ -0.87
SPG7-202ENST00000341316 M0QZ58 72 aa9.55□□□□□ -0.88
SPG7-202ENST00000341316 KRTAP19-2Q3LHN2 52 aa9.55□□□□□ -0.88
SPG7-202ENST00000341316 HMCN2Q8NDA2 5059 aa9.47□□□□□ -0.89
SPG7-202ENST00000341316 LORP23490 312 aaPredicted RBP9.43□□□□□ -0.9
SPG7-202ENST00000341316 R4GN34 69 aa9.38□□□□□ -0.91
SPG7-202ENST00000341316 KRTAP15-1Q3LI76 137 aa9.33□□□□□ -0.92
SPG7-202ENST00000341316 FLGP20930 4061 aaPredicted RBP9.31□□□□□ -0.92
SPG7-202ENST00000341316 FAT4Q6V0I7 4981 aa9.24□□□□□ -0.93
SPG7-202ENST00000341316 NDUFAF8A1L188 74 aa9.15□□□□□ -0.95
SPG7-202ENST00000341316 UBR4Q5T4S7 5183 aa9.13□□□□□ -0.95
SPG7-202ENST00000341316 RNF213Q63HN8 5207 aa9.11□□□□□ -0.95
SPG7-202ENST00000341316 LCE2CQ5TA81 110 aa9.06□□□□□ -0.96
SPG7-202ENST00000341316 CAMK2N1Q7Z7J9 78 aa8.87□□□□□ -0.99
SPG7-202ENST00000341316 PLAC4Q8WY50 150 aa8.87□□□□□ -0.99
SPG7-202ENST00000341316 MT1HP80294 61 aa8.8□□□□□ -1
SPG7-202ENST00000341316 M0R2T5 61 aa8.75□□□□□ -1.01
SPG7-202ENST00000341316 PP632Q6XCG6 107 aa8.75□□□□□ -1.01
SPG7-202ENST00000341316 KRTAP19-1Q8IUB9 90 aa8.7□□□□□ -1.02
SPG7-202ENST00000341316 SPRR2GQ9BYE4 73 aa8.69□□□□□ -1.02
SPG7-202ENST00000341316 MT2AP02795 61 aa8.61□□□□□ -1.03
SPG7-202ENST00000341316 MT1FP04733 61 aa8.61□□□□□ -1.03
SPG7-202ENST00000341316 KRTAP9-8Q9BYQ0 159 aa8.59□□□□□ -1.03
SPG7-202ENST00000341316 KRTAP10-10P60014 251 aa8.55□□□□□ -1.04
SPG7-202ENST00000341316 TNP1P09430 55 aa8.54□□□□□ -1.04
SPG7-202ENST00000341316 LUZP6Q538Z0 58 aa8.46□□□□□ -1.05
SPG7-202ENST00000341316 KRTAP23-1A1A580 65 aa8.42□□□□□ -1.06
SPG7-202ENST00000341316 KRTAP19-8Q3LI54 63 aa8.34□□□□□ -1.07
SPG7-202ENST00000341316 MT1BP07438 61 aa8.28□□□□□ -1.08
SPG7-202ENST00000341316 SPRR5A0A1B0GTR4 108 aa8.23□□□□□ -1.09
SPG7-202ENST00000341316 KRTAP9-3Q9BYQ3 159 aa8.23□□□□□ -1.09
SPG7-202ENST00000341316 KRTAP10-5P60370 271 aa8.17□□□□□ -1.1
SPG7-202ENST00000341316 MT1XP80297 61 aa8.16□□□□□ -1.1
SPG7-202ENST00000341316 LCE3AQ5TA76 89 aa8.15□□□□□ -1.1
SPG7-202ENST00000341316 A0A0A0MQY5 61 aa8.1□□□□□ -1.11
SPG7-202ENST00000341316 USH2AO75445 5202 aa8.03□□□□□ -1.12
SPG7-202ENST00000341316 LCE2AQ5TA79 106 aaPredicted RBP7.99□□□□□ -1.13
SPG7-202ENST00000341316 LCE2BO14633 110 aa7.96□□□□□ -1.13
SPG7-202ENST00000341316 KRTAP8-1Q8IUC2 63 aa7.92□□□□□ -1.14
SPG7-202ENST00000341316 KRTAP10-7P60409 375 aaPredicted RBP7.92□□□□□ -1.14
SPG7-202ENST00000341316 KRTAP10-12P60413 245 aa7.89□□□□□ -1.15
SPG7-202ENST00000341316 PRO2289Q9P1D8 64 aa7.81□□□□□ -1.16
SPG7-202ENST00000341316 KRTAP12-3P60328 96 aa7.75□□□□□ -1.17
SPG7-202ENST00000341316 KMT2DO14686 5537 aa7.73□□□□□ -1.17
SPG7-202ENST00000341316 KRTAP19-5Q3LI72 72 aa7.54□□□□□ -1.2
SPG7-202ENST00000341316 KRTAP4-8A0A0G2JLE6 195 aa7.5□□□□□ -1.21
SPG7-202ENST00000341316 KRTAP4-8Q9BYQ9 185 aa7.5□□□□□ -1.21
SPG7-202ENST00000341316 SSPOA2VEC9 5147 aa7.49□□□□□ -1.21
SPG7-202ENST00000341316 FSIP2Q5CZC0 6907 aa7.43□□□□□ -1.22
SPG7-202ENST00000341316 INE1O15225 51 aa7.31□□□□□ -1.24
SPG7-202ENST00000341316 KRTAP19-7Q3SYF9 63 aa7.29□□□□□ -1.24
SPG7-202ENST00000341316 LCE3CQ5T5A8 94 aa7.28□□□□□ -1.24
SPG7-202ENST00000341316 KRTAP19-6Q3LI70 58 aa7.18□□□□□ -1.26
SPG7-202ENST00000341316 KRTAP4-7Q9BYR0 210 aa7.08□□□□□ -1.28
SPG7-202ENST00000341316 MT1EP04732 61 aa7.08□□□□□ -1.28
SPG7-202ENST00000341316 KRTAP9-6A8MVA2 160 aa7.07□□□□□ -1.28
SPG7-202ENST00000341316 MT1LQ93083 61 aa7.03□□□□□ -1.28
SPG7-202ENST00000341316 FCGBPQ9Y6R7 5405 aaPredicted RBP7.01□□□□□ -1.29
SPG7-202ENST00000341316 MUC12Q9UKN1 5478 aa6.9□□□□□ -1.31
SPG7-202ENST00000341316 LCE2DQ5TA82 110 aaPredicted RBP6.89□□□□□ -1.31
SPG7-202ENST00000341316 KRTAP19-4Q3LI73 84 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms