RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 KRTAP3-1Q9BYR8 98 aa8.22□□□□□ -1.09
PERM1-201ENST00000341290 RPS29P62273 56 aaKnown RBP8.2□□□□□ -1.1
PERM1-201ENST00000341290 HERC2O95714 4834 aa8.19□□□□□ -1.1
PERM1-201ENST00000341290 Q5VSD8 79 aa8.16□□□□□ -1.1
PERM1-201ENST00000341290 KIAA1109Q2LD37 5005 aa8.15□□□□□ -1.1
PERM1-201ENST00000341290 C20orf166-AS1Q96NR2 134 aa8.14□□□□□ -1.11
PERM1-201ENST00000341290 A0A1B0GU33 70 aa8.13□□□□□ -1.11
PERM1-201ENST00000341290 MYCBP2O75592 4640 aa8.13□□□□□ -1.11
PERM1-201ENST00000341290 H1FX-AS1Q4G0G2 97 aa8.06□□□□□ -1.12
PERM1-201ENST00000341290 SPINT4Q6UDR6 99 aa8.05□□□□□ -1.12
PERM1-201ENST00000341290 LRP1Q07954 4544 aaKnown RBP8.04□□□□□ -1.12
PERM1-201ENST00000341290 FAT3Q8TDW7 4589 aa8.04□□□□□ -1.12
PERM1-201ENST00000341290 KRTAP4-5Q9BYR2 181 aa8□□□□□ -1.13
PERM1-201ENST00000341290 K7ERS5 55 aa8□□□□□ -1.13
PERM1-201ENST00000341290 TNXBP22105 4242 aa7.99□□□□□ -1.13
PERM1-201ENST00000341290 KRTAP10-8P60410 259 aa7.98□□□□□ -1.13
PERM1-201ENST00000341290 COX6B2Q6YFQ2 88 aa7.98□□□□□ -1.13
PERM1-201ENST00000341290 NDUFAF8A1L188 74 aa7.97□□□□□ -1.13
PERM1-201ENST00000341290 MT1HL1P0DM35 61 aa7.92□□□□□ -1.14
PERM1-201ENST00000341290 A0A0D9SG42 100 aa7.9□□□□□ -1.14
PERM1-201ENST00000341290 ABCA13Q86UQ4 5058 aa7.9□□□□□ -1.15
PERM1-201ENST00000341290 C10orf95Q9H7T3 257 aa7.89□□□□□ -1.15
PERM1-201ENST00000341290 TPRXLQ17RH7 258 aa7.88□□□□□ -1.15
PERM1-201ENST00000341290 KRTAP13-4Q3LI77 160 aa7.84□□□□□ -1.15
PERM1-201ENST00000341290 KRTAP3-3Q9BYR6 98 aa7.84□□□□□ -1.16
PERM1-201ENST00000341290 KRTAP10-6P60371 365 aaPredicted RBP7.81□□□□□ -1.16
PERM1-201ENST00000341290 A0A0A0MQY5 61 aa7.79□□□□□ -1.16
PERM1-201ENST00000341290 PCLOQ9Y6V0 5065 aa7.76□□□□□ -1.17
PERM1-201ENST00000341290 LPAP08519 4548 aa7.75□□□□□ -1.17
PERM1-201ENST00000341290 RPL37P61927 97 aaKnown RBP7.75□□□□□ -1.17
PERM1-201ENST00000341290 KRTAP15-1Q3LI76 137 aa7.75□□□□□ -1.17
PERM1-201ENST00000341290 XP32Q5T750 250 aa7.75□□□□□ -1.17
PERM1-201ENST00000341290 S4R3F8 94 aa7.74□□□□□ -1.17
PERM1-201ENST00000341290 KRTAP3-2Q9BYR7 98 aa7.74□□□□□ -1.17
PERM1-201ENST00000341290 LRP2P98164 4655 aa7.62□□□□□ -1.19
PERM1-201ENST00000341290 J3QL48 77 aa7.62□□□□□ -1.19
PERM1-201ENST00000341290 KRTAP12-2P59991 146 aa7.59□□□□□ -1.19
PERM1-201ENST00000341290 KRTAP12-1P59990 96 aa7.46□□□□□ -1.22
PERM1-201ENST00000341290 MUC17Q685J3 4493 aa7.45□□□□□ -1.22
PERM1-201ENST00000341290 HMCN2Q8NDA2 5059 aa7.42□□□□□ -1.22
PERM1-201ENST00000341290 LUZP6Q538Z0 58 aa7.39□□□□□ -1.23
PERM1-201ENST00000341290 HERC1Q15751 4861 aa7.36□□□□□ -1.23
PERM1-201ENST00000341290 M0QZ58 72 aa7.31□□□□□ -1.24
PERM1-201ENST00000341290 MUC2Q02817 5179 aa7.3□□□□□ -1.24
PERM1-201ENST00000341290 R4GN34 69 aa7.25□□□□□ -1.25
PERM1-201ENST00000341290 LORP23490 312 aaPredicted RBP7.22□□□□□ -1.25
PERM1-201ENST00000341290 PLAC4Q8WY50 150 aa7.19□□□□□ -1.26
PERM1-201ENST00000341290 SEC61BP60468 96 aaKnown RBP7.17□□□□□ -1.26
PERM1-201ENST00000341290 KRTAP4-1Q9BYQ7 146 aa7.11□□□□□ -1.27
PERM1-201ENST00000341290 KRTAP19-2Q3LHN2 52 aa6.97□□□□□ -1.29
PERM1-201ENST00000341290 RNF213Q63HN8 5207 aa6.95□□□□□ -1.3
PERM1-201ENST00000341290 CAMK2N1Q7Z7J9 78 aa6.93□□□□□ -1.3
PERM1-201ENST00000341290 UBR4Q5T4S7 5183 aa6.92□□□□□ -1.3
PERM1-201ENST00000341290 FAT4Q6V0I7 4981 aa6.9□□□□□ -1.3
PERM1-201ENST00000341290 LCE2CQ5TA81 110 aa6.85□□□□□ -1.31
PERM1-201ENST00000341290 FLGP20930 4061 aaPredicted RBP6.77□□□□□ -1.33
PERM1-201ENST00000341290 LCE2AQ5TA79 106 aaPredicted RBP6.69□□□□□ -1.34
PERM1-201ENST00000341290 MT1HP80294 61 aa6.67□□□□□ -1.34
PERM1-201ENST00000341290 PP632Q6XCG6 107 aa6.65□□□□□ -1.34
PERM1-201ENST00000341290 TNP1P09430 55 aa6.59□□□□□ -1.35
PERM1-201ENST00000341290 M0R2T5 61 aa6.46□□□□□ -1.38
PERM1-201ENST00000341290 KRTAP9-8Q9BYQ0 159 aa6.42□□□□□ -1.38
PERM1-201ENST00000341290 SPRR5A0A1B0GTR4 108 aa6.39□□□□□ -1.39
PERM1-201ENST00000341290 KRTAP19-1Q8IUB9 90 aa6.39□□□□□ -1.39
PERM1-201ENST00000341290 PRO2289Q9P1D8 64 aa6.36□□□□□ -1.39
PERM1-201ENST00000341290 SPRR2GQ9BYE4 73 aa6.35□□□□□ -1.39
PERM1-201ENST00000341290 MT2AP02795 61 aa6.34□□□□□ -1.39
PERM1-201ENST00000341290 KRTAP23-1A1A580 65 aa6.32□□□□□ -1.4
PERM1-201ENST00000341290 LCE3AQ5TA76 89 aa6.31□□□□□ -1.4
PERM1-201ENST00000341290 KRTAP10-10P60014 251 aa6.3□□□□□ -1.4
PERM1-201ENST00000341290 MT1FP04733 61 aa6.27□□□□□ -1.41
PERM1-201ENST00000341290 LCE2DQ5TA82 110 aaPredicted RBP6.24□□□□□ -1.41
PERM1-201ENST00000341290 KRTAP9-3Q9BYQ3 159 aa6.22□□□□□ -1.41
PERM1-201ENST00000341290 FSIP2Q5CZC0 6907 aa6.21□□□□□ -1.42
PERM1-201ENST00000341290 USH2AO75445 5202 aa6.15□□□□□ -1.43
PERM1-201ENST00000341290 INE1O15225 51 aa6.11□□□□□ -1.43
PERM1-201ENST00000341290 KRTAP19-8Q3LI54 63 aa6.08□□□□□ -1.44
PERM1-201ENST00000341290 KMT2DO14686 5537 aa6.06□□□□□ -1.44
PERM1-201ENST00000341290 KRTAP10-5P60370 271 aa6.04□□□□□ -1.44
PERM1-201ENST00000341290 MT1XP80297 61 aa6.03□□□□□ -1.44
PERM1-201ENST00000341290 LCE2BO14633 110 aa6.03□□□□□ -1.44
PERM1-201ENST00000341290 MT1BP07438 61 aa6.03□□□□□ -1.44
PERM1-201ENST00000341290 KRTAP8-1Q8IUC2 63 aa5.99□□□□□ -1.45
PERM1-201ENST00000341290 KRTAP10-7P60409 375 aaPredicted RBP5.96□□□□□ -1.46
PERM1-201ENST00000341290 KRTAP10-12P60413 245 aa5.96□□□□□ -1.46
PERM1-201ENST00000341290 KRTAP12-3P60328 96 aa5.95□□□□□ -1.46
PERM1-201ENST00000341290 KRTAP9-2Q9BYQ4 174 aa5.95□□□□□ -1.46
PERM1-201ENST00000341290 KRTAP19-6Q3LI70 58 aa5.83□□□□□ -1.48
PERM1-201ENST00000341290 SSPOA2VEC9 5147 aa5.75□□□□□ -1.49
PERM1-201ENST00000341290 KRTAP19-5Q3LI72 72 aa5.71□□□□□ -1.5
PERM1-201ENST00000341290 CRCT1Q9UGL9 99 aa5.71□□□□□ -1.5
PERM1-201ENST00000341290 KRTAP4-8A0A0G2JLE6 195 aa5.64□□□□□ -1.51
PERM1-201ENST00000341290 KRTAP4-8Q9BYQ9 185 aa5.64□□□□□ -1.51
PERM1-201ENST00000341290 KRTAP9-6A0A140TA67 174 aa5.61□□□□□ -1.51
PERM1-201ENST00000341290 LCE3CQ5T5A8 94 aa5.58□□□□□ -1.52
PERM1-201ENST00000341290 KRTAP4-7Q9BYR0 210 aa5.5□□□□□ -1.53
PERM1-201ENST00000341290 KRTAP9-6A8MVA2 160 aa5.49□□□□□ -1.53
PERM1-201ENST00000341290 FCGBPQ9Y6R7 5405 aaPredicted RBP5.49□□□□□ -1.53
PERM1-201ENST00000341290 DSTQ03001 7570 aaKnown RBP5.37□□□□□ -1.55
PERM1-201ENST00000341290 KRTAP19-7Q3SYF9 63 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms