RNA–Protein interactions for RNA: ENST00000341119.9

SLC25A40-201, Transcript of solute carrier family 25 member 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC25A40, Length 4,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A40-201ENST00000341119 RYR1P21817 5038 aa3.67□□□□□ -1.82
SLC25A40-201ENST00000341119 RPS29P62273 56 aaKnown RBP3.65□□□□□ -1.82
SLC25A40-201ENST00000341119 TPRXLQ17RH7 258 aa3.65□□□□□ -1.82
SLC25A40-201ENST00000341119 DNAH1Q9P2D7 4330 aa3.65□□□□□ -1.83
SLC25A40-201ENST00000341119 KRTAP10-8P60410 259 aa3.64□□□□□ -1.83
SLC25A40-201ENST00000341119 DNAH8Q96JB1 4490 aa3.63□□□□□ -1.83
SLC25A40-201ENST00000341119 FAT3Q8TDW7 4589 aa3.63□□□□□ -1.83
SLC25A40-201ENST00000341119 KRTAP13-3Q3SY46 172 aa3.62□□□□□ -1.83
SLC25A40-201ENST00000341119 PRO2289Q9P1D8 64 aa3.6□□□□□ -1.83
SLC25A40-201ENST00000341119 LRP1BQ9NZR2 4599 aa3.6□□□□□ -1.83
SLC25A40-201ENST00000341119 DNAH6Q9C0G6 4158 aa3.58□□□□□ -1.84
SLC25A40-201ENST00000341119 DYNC1H1Q14204 4646 aaKnown RBP3.58□□□□□ -1.84
SLC25A40-201ENST00000341119 RYR3Q15413 4870 aa3.55□□□□□ -1.84
SLC25A40-201ENST00000341119 VPS13BQ7Z7G8 4022 aa3.54□□□□□ -1.84
SLC25A40-201ENST00000341119 LRP1Q07954 4544 aaKnown RBP3.53□□□□□ -1.84
SLC25A40-201ENST00000341119 FRAS1Q86XX4 4008 aa3.53□□□□□ -1.84
SLC25A40-201ENST00000341119 MT1HL1P0DM35 61 aa3.53□□□□□ -1.85
SLC25A40-201ENST00000341119 KRTAP3-1Q9BYR8 98 aa3.51□□□□□ -1.85
SLC25A40-201ENST00000341119 VPS13DQ5THJ4 4388 aa3.5□□□□□ -1.85
SLC25A40-201ENST00000341119 KRTAP10-10P60014 251 aa3.5□□□□□ -1.85
SLC25A40-201ENST00000341119 KRTAP10-4P60372 401 aaPredicted RBP3.5□□□□□ -1.85
SLC25A40-201ENST00000341119 SACSQ9NZJ4 4579 aa3.5□□□□□ -1.85
SLC25A40-201ENST00000341119 KMT2CQ8NEZ4 4911 aaKnown RBP3.49□□□□□ -1.85
SLC25A40-201ENST00000341119 DNAH2Q9P225 4427 aa3.47□□□□□ -1.85
SLC25A40-201ENST00000341119 PP632Q6XCG6 107 aa3.47□□□□□ -1.85
SLC25A40-201ENST00000341119 DNAH17Q9UFH2 4485 aa3.46□□□□□ -1.86
SLC25A40-201ENST00000341119 FAT2Q9NYQ8 4349 aa3.46□□□□□ -1.86
SLC25A40-201ENST00000341119 APOBP04114 4563 aaKnown RBP3.45□□□□□ -1.86
SLC25A40-201ENST00000341119 KRTAP3-3Q9BYR6 98 aa3.44□□□□□ -1.86
SLC25A40-201ENST00000341119 KRTAP3-2Q9BYR7 98 aa3.44□□□□□ -1.86
SLC25A40-201ENST00000341119 PKHD1P08F94 4074 aa3.44□□□□□ -1.86
SLC25A40-201ENST00000341119 KRTAP17-1Q9BYP8 105 aa3.42□□□□□ -1.86
SLC25A40-201ENST00000341119 PCLOQ9Y6V0 5065 aa3.41□□□□□ -1.86
SLC25A40-201ENST00000341119 HECTD4Q9Y4D8 3996 aa3.4□□□□□ -1.86
SLC25A40-201ENST00000341119 LRP2P98164 4655 aa3.4□□□□□ -1.87
SLC25A40-201ENST00000341119 INE1O15225 51 aa3.38□□□□□ -1.87
SLC25A40-201ENST00000341119 HERC2O95714 4834 aa3.37□□□□□ -1.87
SLC25A40-201ENST00000341119 KRTAP13-4Q3LI77 160 aa3.37□□□□□ -1.87
SLC25A40-201ENST00000341119 KRTAP12-2P59991 146 aa3.36□□□□□ -1.87
SLC25A40-201ENST00000341119 ALMS1Q8TCU4 4167 aa3.36□□□□□ -1.87
SLC25A40-201ENST00000341119 PKHD1L1Q86WI1 4243 aa3.35□□□□□ -1.87
SLC25A40-201ENST00000341119 EPPK1P58107 5090 aaKnown RBP3.34□□□□□ -1.88
SLC25A40-201ENST00000341119 RYR2Q92736 4967 aa3.33□□□□□ -1.88
SLC25A40-201ENST00000341119 TNP1P09430 55 aa3.32□□□□□ -1.88
SLC25A40-201ENST00000341119 FSIP2Q5CZC0 6907 aa3.31□□□□□ -1.88
SLC25A40-201ENST00000341119 KRTAP10-6P60371 365 aaPredicted RBP3.3□□□□□ -1.88
SLC25A40-201ENST00000341119 PKD1P98161 4303 aa3.29□□□□□ -1.88
SLC25A40-201ENST00000341119 KRTAP4-1Q9BYQ7 146 aa3.28□□□□□ -1.88
SLC25A40-201ENST00000341119 LORP23490 312 aaPredicted RBP3.27□□□□□ -1.89
SLC25A40-201ENST00000341119 KRTAP12-1P59990 96 aa3.27□□□□□ -1.89
SLC25A40-201ENST00000341119 LCE2BO14633 110 aa3.24□□□□□ -1.89
SLC25A40-201ENST00000341119 LPAP08519 4548 aa3.24□□□□□ -1.89
SLC25A40-201ENST00000341119 RNF213Q63HN8 5207 aa3.23□□□□□ -1.89
SLC25A40-201ENST00000341119 ABCA13Q86UQ4 5058 aa3.2□□□□□ -1.9
SLC25A40-201ENST00000341119 MUC2Q02817 5179 aa3.19□□□□□ -1.9
SLC25A40-201ENST00000341119 HERC1Q15751 4861 aa3.18□□□□□ -1.9
SLC25A40-201ENST00000341119 HSPG2P98160 4391 aa3.17□□□□□ -1.9
SLC25A40-201ENST00000341119 UBR4Q5T4S7 5183 aa3.12□□□□□ -1.91
SLC25A40-201ENST00000341119 BIRC6Q9NR09 4857 aa3.12□□□□□ -1.91
SLC25A40-201ENST00000341119 LOC100996750A0A140TA64 210 aa3.09□□□□□ -1.91
SLC25A40-201ENST00000341119 KRTAP4-6Q9BYQ5 205 aa3.09□□□□□ -1.91
SLC25A40-201ENST00000341119 FAT4Q6V0I7 4981 aa3.09□□□□□ -1.91
SLC25A40-201ENST00000341119 OBSCNQ5VST9 7968 aa3.05□□□□□ -1.92
SLC25A40-201ENST00000341119 CRCT1Q9UGL9 99 aa3.03□□□□□ -1.93
SLC25A40-201ENST00000341119 LCE2CQ5TA81 110 aa3.02□□□□□ -1.93
SLC25A40-201ENST00000341119 MT1HP80294 61 aa3.02□□□□□ -1.93
SLC25A40-201ENST00000341119 MT1FP04733 61 aa2.97□□□□□ -1.93
SLC25A40-201ENST00000341119 TNXBP22105 4242 aa2.97□□□□□ -1.93
SLC25A40-201ENST00000341119 MT2AP02795 61 aa2.96□□□□□ -1.93
SLC25A40-201ENST00000341119 LCE3AQ5TA76 89 aa2.94□□□□□ -1.94
SLC25A40-201ENST00000341119 KRTAP10-12P60413 245 aa2.93□□□□□ -1.94
SLC25A40-201ENST00000341119 HMCN2Q8NDA2 5059 aa2.9□□□□□ -1.94
SLC25A40-201ENST00000341119 LCE2AQ5TA79 106 aaPredicted RBP2.9□□□□□ -1.94
SLC25A40-201ENST00000341119 SYNE1Q8NF91 8797 aaKnown RBP2.89□□□□□ -1.95
SLC25A40-201ENST00000341119 KRTAP12-3P60328 96 aa2.85□□□□□ -1.95
SLC25A40-201ENST00000341119 USH2AO75445 5202 aa2.84□□□□□ -1.95
SLC25A40-201ENST00000341119 MUC17Q685J3 4493 aa2.82□□□□□ -1.96
SLC25A40-201ENST00000341119 KRTAP19-1Q8IUB9 90 aa2.82□□□□□ -1.96
SLC25A40-201ENST00000341119 DSTQ03001 7570 aaKnown RBP2.79□□□□□ -1.96
SLC25A40-201ENST00000341119 SPRR2GQ9BYE4 73 aa2.78□□□□□ -1.96
SLC25A40-201ENST00000341119 KRTAP8-1Q8IUC2 63 aa2.77□□□□□ -1.97
SLC25A40-201ENST00000341119 KRTAP9-8Q9BYQ0 159 aa2.77□□□□□ -1.97
SLC25A40-201ENST00000341119 KRTAP4-8A0A0G2JLE6 195 aa2.76□□□□□ -1.97
SLC25A40-201ENST00000341119 KRTAP4-8Q9BYQ9 185 aa2.76□□□□□ -1.97
SLC25A40-201ENST00000341119 KRTAP10-7P60409 375 aaPredicted RBP2.75□□□□□ -1.97
SLC25A40-201ENST00000341119 KRTAP19-2Q3LHN2 52 aa2.74□□□□□ -1.97
SLC25A40-201ENST00000341119 FCGBPQ9Y6R7 5405 aaPredicted RBP2.71□□□□□ -1.98
SLC25A40-201ENST00000341119 FLGP20930 4061 aaPredicted RBP2.7□□□□□ -1.98
SLC25A40-201ENST00000341119 KRTAP19-5Q3LI72 72 aa2.7□□□□□ -1.98
SLC25A40-201ENST00000341119 SPRR2FQ96RM1 72 aa2.7□□□□□ -1.98
SLC25A40-201ENST00000341119 SPRR5A0A1B0GTR4 108 aa2.7□□□□□ -1.98
SLC25A40-201ENST00000341119 MT1BP07438 61 aa2.7□□□□□ -1.98
SLC25A40-201ENST00000341119 KMT2DO14686 5537 aa2.69□□□□□ -1.98
SLC25A40-201ENST00000341119 MT1XP80297 61 aa2.67□□□□□ -1.98
SLC25A40-201ENST00000341119 KRTAP9-3Q9BYQ3 159 aa2.65□□□□□ -1.98
SLC25A40-201ENST00000341119 KRTAP10-5P60370 271 aa2.64□□□□□ -1.99
SLC25A40-201ENST00000341119 SYNE2Q8WXH0 6885 aaKnown RBP2.61□□□□□ -1.99
SLC25A40-201ENST00000341119 KRTAP19-8Q3LI54 63 aa2.61□□□□□ -1.99
SLC25A40-201ENST00000341119 KRTAP4-7Q9BYR0 210 aa2.6□□□□□ -1.99
SLC25A40-201ENST00000341119 MUC12Q9UKN1 5478 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms